G105217 (LOC103376071,LOC104959352)


Basic Information

Item Value
gene id G105217
gene name LOC103376071,LOC104959352
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 15751454 ~ 15755017 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU141277
ctatttatttattgatacaaTACCTCactcaaagaaaaataaacaattttccttataataataatatcatcacaacagtttattttattttctatgccCTCATGTTAGGCGGGGGCATGCACAATAAGAAATACGTAGAAAAAGACAGGCAACAATAAAGCTTTGAATACACAAATCTAATGCACAACAATTCACATACATTCATCTAAACAATATCACCTCTGTTATCATTGTGATGCTGCAGTGCGTTTCCACTACTCATAGCTACAGAAGAAgatcttttgttatttttatatattcataTGTGACTGATAAAACACTGTTTAATACTGTGACCGAGCAGAGTGTTGCACCTGATCTCCACCACTCCAGTGATATCATCCAGTTTTGATGATTCATGGTTTCTTAGGTTTGGCTTTAGGGACCACTGTAACAGTGGTGGACACAGATGTGGCTCCTAGCAGGTTGTGGGCGGTGCAGGTGTATGTTCCCTGGTCTATGTCCCTCACCTCTTCCACCAGGAGGACAGACTGAGACTGCTGTCGAGCCGCGCCTCCGCCGACTGGAGTGACGCTCTCCTGTGTGTTCAGAGGCCTCCCGATCTGCAACCAGTACAGGCGCTCAGTGCAGTTTACATTAAACACAGCATGGGATAAAGGGACCCCTTTATAATAAGTTAATAtcttaataaatcatttatagATGGTTATAGGCCTGGATGCTCTGCAGTCCATAGGTTAGTTGCCTCTTAACTAATAACAGACTAGCTAAAAAGACATGGTAAAATGAACACAGATCCTTCACTTACTTTGTCTCACAACCAACCTCAAATGTGTAGGTTAGTAGTACTTTAGTAAGTATGCCATATTGTCCTTGAGTGTCTGACCTGCTGTCCTGGGTATTCCCAGTTGAACTCTACGAGCACGTCCTGTTCCCCCGCCACAGAGCAGCTGACACGCAGATCCCCGGGTCGATGAATGGTGAAGCCCCTCTTGACGTTAAAAGAGATCTCAGTCCCGTCCACCGCCACCTCCGCTGGTGGAAACTCGCGGTGCAGAGTCACTTTAGCCTCAGGCGACGTCACCTGGCAGGGGAGGAGCGTCGGCCAGTTGGTTCTCAGCTGAATCACCTCGTAGTAATCAGACGACGGAACAAATAGCTCCTGTGGGTCTGATTGGTACAGTGAGAAGATATGGCAAGACTGACGATAAGATAACGTGAGTATGAAAAAAGGCTTCTGAGAAGTGCACGTGTAAGCATCAATAAAGTTGATTCACTGCACCGGGAAAAAGAACGAAGACTTTTACAGCTTTGTCATACTCCTTCCTGCAGTCTGTGTCTTCACAGTACATAGGGTAACAGCTGTATTCCCCTGTGTCCGCACCAGTAGTGTTGACTAATGTCAGAAGGCCATAGCGCTCATGTTGCACAGTCCTGAGCCTTCCGTCATCATCCTCCTCCAGGTACGTGGGGAAGCTCCACTGCACAGGTTTGCCCCTGCACCTCAGCTCCAGAGTGTCTCCTGTCTGCACACTTATAGTTTCTCCCACCTTCTTAAACTTCCCTTTGTTAAACACCTGTGTGAGGAAGGTCCGTGCAGATGTAGCTTTGATTTTGGGTTTGGCTGTTACAGCTCTGGGCCCTTTATTTGTTGATTTCCCAACTTTGGGTTTGCTTGGCTTGGGCTTCCTCCCTGGAGTAGTCCTCTGTTCTTGGGCGTCTTTTTGACAATGAGCTAACTCGAAGATTACGGCACAAAAAAGGAGAGCGCTAAGCACAAGCCTCCCCTTTGATCCAGACAAGTTCGCCAAAGGCATGATTGATCAGTGGAATAAAATTAAAGGCTGTGCATTGTTAGTTCATGCAGTTGAACACAGAGAACGTACTGCAGAAaccagagagaagaggaggagggcagAGCCTGCAAAGTGAGCGGTCAGCTGTTTACCAGAATCACACAAATTCCTCCTCCTGAGAGTGGCATTAGTACCCCA
>TU141278
AGTTAACATAGATGAGCATGTACTTGGTGGAGCTCTGCCTCAGGTTGCCCAGGCTGGCGACACAGTACAAAGCTCCAGCATGATAAGGCCGGGGTCGATGAATGGTGAAGCCCCTCTTGACGTTAAAAGAGATCTCAGTCCCGTCCACCGCCACCTCCGCTGGTGGAAACTCGCGGTGCAGAGTCACTTTAGCCTCAGGCGACGTCACCTGGCAGGGGAGGAGCGTCGGCCAGTTGGTTCTCAGCTGAATCACCTCGTAGTAATCAGACGACGGAACAAATAGCTCCTGTGGGTCTGATTGGTACAGTGAGAAGATATGGCAAGACTGACGATAAGATAACGTGAGTATGAAAAAAGGCTTCTGAGAAGTGCACGTGTAAGCATCAATAAAGTTGATTCACTGCACCGGGAAAAAGAACGAAGACTTTTACAGCTTTGTCATACTCCTTCCTGCAGTCTGTGTCTTCACAGTACATAGGGTAACAGCTGTATTCCCCTGTGTCCGCACCAGTAGTGTTGACTAATGTCAGAAGGCCATAGCGCTCATGTTGCACAGTCCTGAGCCTTCCGTCATCATCCTCCTCCAGGTACGTGGGGAAGCTCCACTGCACAGGTTTGCCCCTGCACCTCAGCTCCAGAGTGTCTCCTGTCTGCACACTTATAGTTTCTCCCACCTTCTTAAACTTCCCTTTGTTAAACACCTGTGTGAGGAAGGTCCGTGCAGATGTAGCTTTGATTTTGGGTTTGGCTGTTACAGCTCTGGGCCCTTTATTTGTTGATTTCCCAACTTTGGGTTTGCTTGGCTTGGGCTTCCTCCCTGGAGTAGTCCTCTGTTCTTGGGCGTCTTTTTGACAATGAGCTAACTCGAAGATTACGGCACAAAAAAGGAGAGCGCTAAGCACAAGCCTCCCCTTTGATCCAGACAAGTTCGCCAAAGGCATGATTGATCAGTGGAATAAAATTAAAGGCTGTGCATTGTTAGTTCATGCAGTTGAACACAGAGAACGTACTGCAGAAaccagagagaagaggaggagggcagAGCCTGCAAAGTGAGCGGTCAGCTGTTTACCAGAATCACACAAATTCCTCCTCCTGAGAGTGGCATTAGTACCCCA

Function

NR:

description
PREDICTED: platelet-derived growth factor receptor-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141277 True 1994 lncRNA 0.46 5 15751454 15755017
TU141278 False 1118 lncRNA 0.50 4 15751454 15753024

Neighbor

gene id symbol gene type direction distance location
anxa6 anxa6,LOC102795126 coding downstream 22135 15717241 ~ 15729319 (-)
tnip1 tnip1,LOC103376067 coding downstream 35494 15698337 ~ 15715960 (-)
dctn4 dctn4 coding downstream 62636 15671635 ~ 15688818 (-)
LOC120566876 LOC104959829 coding downstream 113094 15621014 ~ 15638360 (-)
ctnna1 ctnna1 coding downstream 234694 15441419 ~ 15516760 (-)
rmnd5b rmnd5b,LOC103391242 coding upstream 28785 15783802 ~ 15791552 (-)
hbegfa LOC104968122 coding upstream 95477 15850494 ~ 15854036 (-)
cltb cltb,LOC103471122 coding upstream 159863 15914880 ~ 15919202 (-)
dok3 NA coding upstream 523298 16278315 ~ 16286986 (-)
LOC120567264 ddx41 coding upstream 532064 16287081 ~ 16297362 (-)
G105149 NA non-coding downstream 181374 15569818 ~ 15570080 (-)
G105147 NA non-coding downstream 222195 15527066 ~ 15529259 (-)
LOC120567002 NA non-coding downstream 314521 15205133 ~ 15436933 (-)
G105230 NA non-coding upstream 73274 15828291 ~ 15828491 (-)
G105241 NA non-coding upstream 125346 15880363 ~ 15889068 (-)
G105243 LOC103365697,LOC106906325 non-coding upstream 135140 15890157 ~ 15892250 (-)
G105247 NA non-coding upstream 141240 15896257 ~ 15896732 (-)
G105253 NA non-coding upstream 147352 15902369 ~ 15904937 (-)
tspan17 tspan17,LOC103361971 other downstream 132346 15598343 ~ 15619108 (-)
G105086 NA other downstream 616718 15133530 ~ 15134736 (-)
rnf44 rnf44 other downstream 642856 15089404 ~ 15108598 (-)
LOC120567441 LOC100697283,LOC102197909,LOC102314576 other downstream 1011961 14735192 ~ 14739493 (-)
uvssa uvssa,LOC104961899,LOC106533076 other downstream 1177961 14537100 ~ 14573493 (-)
hnrnph1 hnrnph1,LOC102791917 other upstream 111043 15866060 ~ 15871949 (-)
unc5a unc5a,LOC102788949 other upstream 205180 15960197 ~ 16103794 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other upstream 769339 16524356 ~ 16674855 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other upstream 1202626 16957643 ~ 16963536 (-)
tmsb1 NA other upstream 1387065 17142082 ~ 17151616 (-)

Expression


Co-expression Network