G105253


Basic Information

Item Value
gene id G105253
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 15902369 ~ 15904937 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU141330
CTGATGTGGATGCACTCCATGGATGAGGGGAAAAGTGCTGTCTGCTGAATGAGGGTGTGCCAACTCCTGTATGACCGTGCAGATACACAGGGCTGCCAGTGATACTAGTGGCATAGCTGGTCAACCGATGGGGCTGTTGACCATCCTCTGTGAGGCAGAGCGGTAGCCAGGGGCTTTGGAGCTGTCTGGAGGAGGTGGGGGCATCATATTCTCCATTTGGCCCATGTAGGCTGGTGGGGCCGAGTATGACTGCTCTGGAGCCGATCGAGTCGGCAGATGGCATGCACCCCACACCTGATTGTTTCCAACCTGCAAGGCGAGCACAATTGATGACAAAGTAGTAACTATTGAGTGTGGTATTATTGATCTTATGTAACAGCAAGGATCTCATGACATGTGTACCGTTTAGTTTATTCAGCCATTTAAACTCCTTCTGTATCATTTAAAGTCTCTAGATAAGAACAGCTAAAAGTAAAACAAGATGTCAGGGTAATGTTTACATTATAAATGTTACTTTAACTCACCTGGTTATTGTTATCAAAGATGCTGCTGAAGTTGAAGAGGCCTGCAGGACCAAAGTTGGGGGGGATCTGCTGAGGCTTGCCTGCATTGGCCACATGCTGCATCTGGGAACCGTTCATCATCCCCAGGTTAGAGACCTGAAGGGAGCCTTGAGCCTGGGCTTGAGCTTGGTTCTGGGCTTGTGGAGGCAAAGTTGTCGACTGGGACGTTTGGTTTTGGGTCTGCTTCGGGGGTTCTTGCTGAGCATTGAAGGGCACAAACACagattgttgctgctgctgctgcggttgTTGCTCAGGAAGCGAATAGTAAGGCCCTGGTGGCTGCATACGATGGGAGACTCTGGGCGCAGGGGCTGAGAAGTGGGGTACAGTGTTGTTGGGGTGTGCAACATTGTGTGAGAGGACAGGAGGAGGTGCTGATGGGTGGTGGGAGCTCGGCTGTGGGTTGAGGAGGGGTGGTGGAGCCTCTGTGGATGgtacagaggagggaggaggtaaCTGCTGCCGAGGCTCTGGCTTGGGAGGTAAAGCCATGGCAGGGGCAGTGAAACCCACAGAGTTGATGCTCTCGCTGACAGAAACAGCCTGGTTTTCTGAAGATAGAGAGGGCTTCTCTTTACCAAGAGGGGCGACGGCACTGGACTCTGTTTTAGTTAGCTGGATGGGGGGCTGTGAGATAGGTCCGACTGACTGCGGGGGGGGCGGTAGTTGTAGTGGAACTGTGATGTGCAGGAGAACCAGTGCCTCGTACTGCATTGCCGCCACTAGTTGAAGTAGCCACAACAGACACGGGGATGACACCAGCAGGCTTTGGGTCAGGGGCGAAGAGCTGTTTCCTGACAGAGGAAGGAGTGGGGATGCTCGGCTGGGGATTGTATGGAGTAGGATTAGGGGTATGAGGCGAGGCCGTAGATGTGTTAGGTGCACTGGTGGTGGCGGTGGTCGTGACTGAGGCTCCTGAGCTGGCTGAGTTGCTGTGCTCATTATGGGTCGAGTTGGCTCTGGCCTGGCCTCCAGTGCCGTTGGTTCCTCCATTGTGCTTGGGGGAGCTGTTGGCACTGCCGGGACTCACAGGACGCACGGGGAAGGATCCCCAGGTGCTGGCGGCGGGAGCGAAGGTGCCACCAAACTGGGCCATGGGTAGACGAGGGTGTCTGATCTGGTGCATGGTCTGAGCAGCTAGTAGAGCCAGCTGAGGGTGGGCGTACGCCAAGGGCAGAGACACAGGGaagggctgtctgacatttGATGACAGTCCCTTCCCAATCTTTCCCCCGGCCTGAGAGGAGGGTGAAGACGAGGATGAAGAGGGCTGGAACGAGACGCCTGTGGAGACCAACGAGCTCAGGGATTTCGGCCCAGTGGTTGAACCGCTGGTGGGCCCTGTGGTACTGGGGAAGGAAGCTGGGGTCATTTTAGAGCCTGGGGCTCGGATGTGATTCCTGGGGATCAGATCTTCAAGCTCTTTGGCTGGGTCTTGGATTAGAGCATTGATCAGCTGGACAGCATACCTTGTAGACTCTGTCCCTCCTCTGAAACAACCAAGCACACTTCATTCAGACTATGTTCTTGTGTTAAAAAGTATAACTTATCAAATTCAGCCTGATCTTTTTCGGGCCTCAGTTTTGAGTATTTTGCACAACATAGTTAATGTCATTCAATTAACCAAAACACTGTTTATCCAAC

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko05164 Influenza A

RNA

RNA id representative length rna type GC content exon number start site end site
TU141330 True 2210 lncRNA 0.53 2 15902369 15904937

Neighbor

gene id symbol gene type direction distance location
hbegfa LOC104968122 coding downstream 48333 15850494 ~ 15854036 (-)
rmnd5b rmnd5b,LOC103391242 coding downstream 110817 15783802 ~ 15791552 (-)
anxa6 anxa6,LOC102795126 coding downstream 173050 15717241 ~ 15729319 (-)
tnip1 tnip1,LOC103376067 coding downstream 186409 15698337 ~ 15715960 (-)
dctn4 dctn4 coding downstream 213551 15671635 ~ 15688818 (-)
cltb cltb,LOC103471122 coding upstream 9943 15914880 ~ 15919202 (-)
dok3 NA coding upstream 373378 16278315 ~ 16286986 (-)
LOC120567264 ddx41 coding upstream 382144 16287081 ~ 16297362 (-)
fam193b fam193b coding upstream 393883 16298820 ~ 16309416 (-)
prelid1a prelid1 coding upstream 411674 16316611 ~ 16323377 (-)
G105247 NA non-coding downstream 5637 15896257 ~ 15896732 (-)
G105243 LOC103365697,LOC106906325 non-coding downstream 10119 15890157 ~ 15892250 (-)
G105241 NA non-coding downstream 13301 15880363 ~ 15889068 (-)
G105230 NA non-coding downstream 73878 15828291 ~ 15828491 (-)
G105217 LOC103376071,LOC104959352 non-coding downstream 147352 15751454 ~ 15755017 (-)
G105279 NA non-coding upstream 23680 15928617 ~ 15958760 (-)
G105289 NA non-coding upstream 54182 15959119 ~ 15960179 (-)
G105292 NA non-coding upstream 150646 16055583 ~ 16056028 (-)
G105331 NA non-coding upstream 358294 16263231 ~ 16263863 (-)
G105332 NA non-coding upstream 359264 16264201 ~ 16264419 (-)
hnrnph1 hnrnph1,LOC102791917 other downstream 30420 15866060 ~ 15871949 (-)
tspan17 tspan17,LOC103361971 other downstream 283261 15598343 ~ 15619108 (-)
G105086 NA other downstream 767633 15133530 ~ 15134736 (-)
rnf44 rnf44 other downstream 793771 15089404 ~ 15108598 (-)
LOC120567441 LOC100697283,LOC102197909,LOC102314576 other downstream 1162876 14735192 ~ 14739493 (-)
unc5a unc5a,LOC102788949 other upstream 55260 15960197 ~ 16103794 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other upstream 619419 16524356 ~ 16674855 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other upstream 1052706 16957643 ~ 16963536 (-)
tmsb1 NA other upstream 1237145 17142082 ~ 17151616 (-)
frmpd3 frmpd3 other upstream 1261959 17166896 ~ 17256932 (-)

Expression


Co-expression Network