G105279


Basic Information

Item Value
gene id G105279
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 15928617 ~ 15958760 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU141361
TGttgtaaaattatttatttctacatCAACATTGTAAGGATTCACTAGGCTTGTGGTTACAACAGCTGTTAGTTTAAAAGCACTTATTGTATTCACAACAAAACTGAGCGAAAACATCAGAAAGTCCATTGCCCTCTCGTTGTGGAGGTGTTGGTGAGAGCGAAGACAGCCAAATCATCAGTCAATAGAAAATCTTACAGATGGATTCACCTCAAAAGAACGTGTCAGCTCAGTGTTCTGCCCCAGCTCTTGGCATTACTAAAATATTAACagctatgaaaaaaaaacgacaacacTTACAGGCCCGTTCTGAAGCAATATAAATACAAATTCACCATGACTTGAAAGTACTCCAAGGAATAATCGCAATATCATATAGTAATATGGAGGACAAGATCTAAATGATTTTCTTTCCCTacattaaagggatagttcagctTTTtagaagtgtgtttgtgtgaggtacttatccatagtcagtgtatcaCAGTAGAGGACTGTTAGCATGCGACTTTCCTTTTTATGGATAGTCGGTACTCTGTCCAATAAATGATCATTTCAAAAGCTTTGACATTTAAAACAAGAATGGCCCTTTCTTTTTGTCACCCACACGTGTCACTATTAAAATTGGATCAATTGAGGATTATTACGTGACTCACAAATTACAGTTAACTATATTTCTCATTTGGCTCTGGCAAATTTAAAGCACATACTGCAGCTAGTGCTTCTGTGGAGAGGTGCAGGGGTCCAGTCAAGCAGAAATGGGGGggggggggggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141361 True 779 lncRNA 0.39 2 15928617 15958760

Neighbor

gene id symbol gene type direction distance location
cltb cltb,LOC103471122 coding downstream 9415 15914880 ~ 15919202 (-)
hbegfa LOC104968122 coding downstream 74581 15850494 ~ 15854036 (-)
rmnd5b rmnd5b,LOC103391242 coding downstream 137065 15783802 ~ 15791552 (-)
anxa6 anxa6,LOC102795126 coding downstream 199298 15717241 ~ 15729319 (-)
tnip1 tnip1,LOC103376067 coding downstream 212657 15698337 ~ 15715960 (-)
dok3 NA coding upstream 319555 16278315 ~ 16286986 (-)
LOC120567264 ddx41 coding upstream 328321 16287081 ~ 16297362 (-)
fam193b fam193b coding upstream 340060 16298820 ~ 16309416 (-)
prelid1a prelid1 coding upstream 357851 16316611 ~ 16323377 (-)
npy7r LOC104967498,LOC104930063,LOC103356978 coding upstream 365813 16324573 ~ 16329511 (-)
G105253 NA non-coding downstream 23680 15902369 ~ 15904937 (-)
G105247 NA non-coding downstream 31885 15896257 ~ 15896732 (-)
G105243 LOC103365697,LOC106906325 non-coding downstream 36367 15890157 ~ 15892250 (-)
G105241 NA non-coding downstream 39549 15880363 ~ 15889068 (-)
G105230 NA non-coding downstream 100126 15828291 ~ 15828491 (-)
G105289 NA non-coding upstream 359 15959119 ~ 15960179 (-)
G105292 NA non-coding upstream 96823 16055583 ~ 16056028 (-)
G105331 NA non-coding upstream 304471 16263231 ~ 16263863 (-)
G105332 NA non-coding upstream 305441 16264201 ~ 16264419 (-)
G105337 LOC103356977,LOC104930064,LOC102195804 non-coding upstream 375513 16334273 ~ 16339018 (-)
hnrnph1 hnrnph1,LOC102791917 other downstream 56668 15866060 ~ 15871949 (-)
tspan17 tspan17,LOC103361971 other downstream 309509 15598343 ~ 15619108 (-)
G105086 NA other downstream 793881 15133530 ~ 15134736 (-)
rnf44 rnf44 other downstream 820019 15089404 ~ 15108598 (-)
LOC120567441 LOC100697283,LOC102197909,LOC102314576 other downstream 1189124 14735192 ~ 14739493 (-)
unc5a unc5a,LOC102788949 other upstream 1437 15960197 ~ 16103794 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other upstream 565596 16524356 ~ 16674855 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other upstream 998883 16957643 ~ 16963536 (-)
tmsb1 NA other upstream 1183322 17142082 ~ 17151616 (-)
frmpd3 frmpd3 other upstream 1208136 17166896 ~ 17256932 (-)

Expression


Co-expression Network