G105337 (LOC103356977,LOC104930064,LOC102195804)


Basic Information

Item Value
gene id G105337
gene name LOC103356977,LOC104930064,LOC102195804
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 16334273 ~ 16339018 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU141424
ATACATTACTTAAAACATGGGTTTTATAAAACGTTCACACGTGATCTACATAGTCACAGCTTGACGGCTACTTTTGATGCATCAAAACATGTCAGACAAACTTGGGATTCTCATTTGAACAGTTTTGTCGCGGCCGAGACCTTACCTCAGTCAGTATGATGCTCTCAGTGGCTGCGCTAGCCTGCTGTAGCGCTCTCATATTGTCCTCCAGCTCCCTCACGGCCATCTCCGTGGCCTCCAGGTGGCGCTGGACtttctccagctcctcctcctgctctctccTTAGCTGCTCCAGCGCACAGGTCTCCTCATCGTGCAGGATCTGATAAAGAGCTCGGAATTCCCCTTTGACACGAGTCTGCAGATCTGTGCCGAATCTCTTTATGGTATCCAtcttgtctttgtctctgcGAATACTGTTGATGAAGTCCTCCTTCTTCAGGCGATAGCTTTCCAAAGTCTCTTTCAGTTGTTTCTCTAGGTTTTTCATATACGTGTCCGAGGTGGTGGCCCGGACCTTCTCCACCATGGCTGTCACAAGGTAGTTAGTTTGGAACTGCTTGGAGCTGAACTCCTTGCGACATTGCGGGCAGGTCACAGGCCCCTGAGTCCCTCTCCAGTACCTGGAGATGCAGGGTTTGCAGAAGTGGTGCATGCAGGCCAACATGACAGGCTCCCGGAACAGGTCACAACATATGGCACATGTCAGGTCCTCTCTGAGGCTGCCTTTGGGGGatttagcaacaacagcagcagcagcagccatggtGAATGGTTGGTTTGCTGACCAAAGTCCGTCCACACTGAGGAAGTAAAAGCAAAAGCAaatgtagagagagacagaatgtGGTAAACAAATACTTCCCTTCTGTGGAGGGTTTACAAGGAGACACGTTTGAAT

Function

NR:

description
PREDICTED: zinc-binding protein A33-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141424 True 901 lncRNA 0.50 3 16334273 16339018

Neighbor

gene id symbol gene type direction distance location
npy7r LOC104967498,LOC104930063,LOC103356978 coding downstream 4762 16324573 ~ 16329511 (-)
prelid1a prelid1 coding downstream 10896 16316611 ~ 16323377 (-)
fam193b fam193b coding downstream 24857 16298820 ~ 16309416 (-)
LOC120567264 ddx41 coding downstream 36911 16287081 ~ 16297362 (-)
dok3 NA coding downstream 47287 16278315 ~ 16286986 (-)
ergic1 ergic1 coding upstream 56217 16395235 ~ 16414331 (-)
LOC120567053 LOC103356970,LOC107093447 coding upstream 170340 16509358 ~ 16513111 (-)
gjb1b LOC107093452,LOC101485490,LOC102291952 coding upstream 174543 16513561 ~ 16518060 (-)
LOC120567296 NA coding upstream 179136 16518154 ~ 16526951 (-)
LOC120567142 LOC104959287 coding upstream 191252 16530270 ~ 16533180 (-)
G105332 NA non-coding downstream 69854 16264201 ~ 16264419 (-)
G105331 NA non-coding downstream 70410 16263231 ~ 16263863 (-)
G105292 NA non-coding downstream 278245 16055583 ~ 16056028 (-)
G105289 NA non-coding downstream 374094 15959119 ~ 15960179 (-)
G105279 NA non-coding downstream 375513 15928617 ~ 15958760 (-)
G105417 NA non-coding upstream 127430 16466448 ~ 16506278 (-)
LOC120567052 NA non-coding upstream 157439 16496457 ~ 16497322 (-)
G105433 NA non-coding upstream 348461 16687479 ~ 16687729 (-)
G105435 NA non-coding upstream 349038 16688056 ~ 16688590 (-)
G105436 NA non-coding upstream 350065 16689083 ~ 16689305 (-)
unc5a unc5a,LOC102788949 other downstream 230479 15960197 ~ 16103794 (-)
hnrnph1 hnrnph1,LOC102791917 other downstream 462324 15866060 ~ 15871949 (-)
tspan17 tspan17,LOC103361971 other downstream 715165 15598343 ~ 15619108 (-)
G105086 NA other downstream 1199537 15133530 ~ 15134736 (-)
rnf44 rnf44 other downstream 1225675 15089404 ~ 15108598 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other upstream 185338 16524356 ~ 16674855 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other upstream 618625 16957643 ~ 16963536 (-)
tmsb1 NA other upstream 803064 17142082 ~ 17151616 (-)
frmpd3 frmpd3 other upstream 827878 17166896 ~ 17256932 (-)
nexmifb kiaa2022 other upstream 1183123 17522141 ~ 17577811 (-)

Expression


Co-expression Network