G105417


Basic Information

Item Value
gene id G105417
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 16466448 ~ 16506278 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU141525
CTTACTGTTTGTTTTCAATGGAAGTGCTGATATTGACCAAATAAAACTAAGCTGATATTCTTTAGGTAAAAATGGCTCTAGATAAAtaaagtaaacacacacacacacacatttctgggaatacattttggtttagtGTGGCTTACACAACAGATGGTAGGGGAATCCATTGCTTTTTGTGTGATGCAGCTTTTTTAGCACactcatttattaaaaaattaaataaaaaaagtccatCCTAGATTTCAACACAGCATCTTCTCAAAGATAAAAACTCTGATTTTAGCATGCCACTGATATAGACCATATGTGGCAGGCTTAAGCCACAAATATTTAACCTCAACCCTTTTCAGTATAGACAGTCTGTTTGTATTATAAACTCAAAAATATATAGCATATAAGAAACCTGAAGACCATGATGTCTACATCACATCTGATTCTGTCTGTATCATTAGTGTACAGTGTTCTTTATAGAGAATAGTATACAGTAACAAAATGTGTAAGCATTTCCATGCACAATTTGACATGtccaaaaaatataaatctgcATTTGGTTTCAGTGAAATCGACAAAATTGCACAATGTCTTTGGAAAAATGTGAAACAACTAAAAAGTTACAATTATTAAGTTTATTTGAGCAAGTCAACATTCTCATCttagtttttttcgattgctaaacgacagtgggcataactggagtcacatgtgcaaaactcaaactacagtctccacagcagcagttcatgtggaccaaactctagttcgtttttcattgcttgaacacagttttcaaaactctacacacttatcccatgactttaaccacaacgtgcacaacactgtagatttacagcactttgttcaaatgctaacacactgctgtcaaaactgtaaaccacacattcaaaacagaatagatttcagtctggtgcctatcaaacactgctgattgcaattttacctgaaagcctaagcaagtgtcttattttagactagttagtgaacatatatggtatttatacaaagaaagctcagaaagccttttttttgtatacaaacaccaaataagaatgaaacaattctacactgtactgtttgagagaaacgggtaaaagagcaaagataccaatatgtccaggtaagatgtctgagg
>TU141531
CTTACTGTTTGTTTTCAATGGAAGTGCTGATATTGACCAAATAAAACTAAGCTGATATTCTTTAGGTAAAAATGGCTCTAGATAAAtaaagtaaacacacacacacacacatttctgggaatacattttggtttagtGTGGCTTACACAACAGATGGTAGGGGAATCCATTGCTTTTTGTGTGATGCAGCTTTTTTAGCACactcatttattaaaaaattaaataaaaaaagtccatCCTAGATTTCAACACAGCATCTTCTCAAAGATAAAAACTCTGATTTTAGCATGCCACTGATATAGACCATATGTGGCAGGCTTAAGCCACAAATATTTAACCTCAACCCTTTTCAGTATAGACAGTCTGTTTGTATTATAAACTCAAAAATATATAGCATATAAGAAACCTGAAGACCATGATGTCTACATCACATCTGATTCTGTCTGTATCATTAGTGTACAGTGTTCTTTATAGAGAATAGTATACAGTAACAAAATGTGTAAGCATTTCCATGCACAATTTGACATGtccaaaaaatataaatctgcATTTGGTTTCAGTGAAATCGACAAAATTGCACAATGTCTTTGGAAAAATGTGAAACAACTAAAAAGTTACAATTATTAAGTTTATTTGAGCAAGTCAACATTCTCATCttagtttttttcgattgctaaacgacagtgggcataactggagtcacatgtgcaaaactcaaactacagtctccacagcagcagttcatgtggaccaaactctagttcgtttttcattgcttgaacacagttttcaaaactctacacacttatcccatgactttaaccacaacgtgcacaacactgtagatttacagcactttgttcaaatgctaacacactgctgtcaaaactgtaaaccacacattcaaaacagaatagatttcagtctggtgcctatcaaacactgctgattgcaattttacctgaaagcctaagcaagtgtcttattttagactagttagtgaacatatatggtatttatacaaagaaagctcagaaagccttttttttgtatacaaacaccaaataagaatgaaactgatacactgtactgtttgagagaaacaggtaaaagagcaaagataccaatatgtcctggtaagatgtctgagggtatgtacacagctataaaaaaaagtgaaaaacactatatctttacaatagtaaaactgcgttcttactgtttttcagaaagtaatggaggtgaaagcaatagaaacacaacattcatttgtatttagagatgatgcagacatccaatgtgatgaagaaaacttgccacatgatgctggattagtcacactattctttggtactgttatgtacctttagtttttttctcctcagtgtgttctgagtgacagtgtgtgttatctcagtgaggcttgtgcatagtgtttggctgcactgagcctgttttgagacgtatgttaagagttgtgttgctttaaatGAGTTTTGCaggtgatgtgaactgtttagctcaggtgactgtaggtagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141525 False 1153 lncRNA 0.34 2 16467051 16506278
TU141531 True 1541 lncRNA 0.35 2 16466448 16506278

Neighbor

gene id symbol gene type direction distance location
ergic1 ergic1 coding downstream 52117 16395235 ~ 16414331 (-)
npy7r LOC104967498,LOC104930063,LOC103356978 coding downstream 136937 16324573 ~ 16329511 (-)
prelid1a prelid1 coding downstream 143071 16316611 ~ 16323377 (-)
fam193b fam193b coding downstream 157032 16298820 ~ 16309416 (-)
LOC120567264 ddx41 coding downstream 169086 16287081 ~ 16297362 (-)
LOC120567053 LOC103356970,LOC107093447 coding upstream 3080 16509358 ~ 16513111 (-)
gjb1b LOC107093452,LOC101485490,LOC102291952 coding upstream 7283 16513561 ~ 16518060 (-)
LOC120567296 NA coding upstream 11876 16518154 ~ 16526951 (-)
LOC120567142 LOC104959287 coding upstream 23992 16530270 ~ 16533180 (-)
LOC120567144 LOC104923178 coding upstream 27004 16533282 ~ 16537447 (-)
G105337 LOC103356977,LOC104930064,LOC102195804 non-coding downstream 127430 16334273 ~ 16339018 (-)
G105332 NA non-coding downstream 202029 16264201 ~ 16264419 (-)
G105331 NA non-coding downstream 202585 16263231 ~ 16263863 (-)
G105292 NA non-coding downstream 410420 16055583 ~ 16056028 (-)
G105289 NA non-coding downstream 506269 15959119 ~ 15960179 (-)
G105433 NA non-coding upstream 181201 16687479 ~ 16687729 (-)
G105435 NA non-coding upstream 181778 16688056 ~ 16688590 (-)
G105436 NA non-coding upstream 182805 16689083 ~ 16689305 (-)
G105443 NA non-coding upstream 249058 16755336 ~ 16755558 (-)
G105549 NA non-coding upstream 546227 17052505 ~ 17055622 (-)
unc5a unc5a,LOC102788949 other downstream 362654 15960197 ~ 16103794 (-)
hnrnph1 hnrnph1,LOC102791917 other downstream 594499 15866060 ~ 15871949 (-)
tspan17 tspan17,LOC103361971 other downstream 847340 15598343 ~ 15619108 (-)
G105086 NA other downstream 1331712 15133530 ~ 15134736 (-)
rnf44 rnf44 other downstream 1357850 15089404 ~ 15108598 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other upstream 18078 16524356 ~ 16674855 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other upstream 451365 16957643 ~ 16963536 (-)
tmsb1 NA other upstream 635804 17142082 ~ 17151616 (-)
frmpd3 frmpd3 other upstream 660618 17166896 ~ 17256932 (-)
nexmifb kiaa2022 other upstream 1015863 17522141 ~ 17577811 (-)

Expression


Co-expression Network