G105435


Basic Information

Item Value
gene id G105435
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 16688056 ~ 16688590 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU141553
aaactacagtctgcactacctacagtcacctgagctaaacagttcacatcacctgcaaaactcatttaaagcaacacaactcttaacatacgtctcaaaacaggctcagtgcagccaaacactatgcacaagcctcactgagataacacacactgtcactcagaacacactgaggggaaaaaaactaaaggtacataacagtaccaacgaatagtgtgactaatcctgcctctctccagcatcatgtggcaagttctcttcatcacattggatgtctgcatcatctctaaatacaaatgaatgtggtgtttctattgctttcacttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141553 True 328 lncRNA 0.42 2 16688056 16688590

Neighbor

gene id symbol gene type direction distance location
eda NA coding downstream 138083 16537733 ~ 16549973 (-)
LOC120567144 LOC104923178 coding downstream 150609 16533282 ~ 16537447 (-)
LOC120567142 LOC104959287 coding downstream 154876 16530270 ~ 16533180 (-)
LOC120567296 NA coding downstream 161105 16518154 ~ 16526951 (-)
gjb1b LOC107093452,LOC101485490,LOC102291952 coding downstream 169996 16513561 ~ 16518060 (-)
si:dkey-27i16.2 LOC103370713,LOC104948504,LOC103391155,LOC108242049,LOC101171753 coding upstream 249750 16938340 ~ 16942236 (-)
znf185 NA coding upstream 282582 16971172 ~ 16988999 (-)
nsdhl nsdhl coding upstream 301227 16989817 ~ 16995549 (-)
gcna NA coding upstream 312820 17001410 ~ 17007394 (-)
ogt.1 ogt coding upstream 319538 17008128 ~ 17024727 (-)
G105433 NA non-coding downstream 327 16687479 ~ 16687729 (-)
G105417 NA non-coding downstream 181778 16466448 ~ 16506278 (-)
LOC120567052 NA non-coding downstream 190734 16496457 ~ 16497322 (-)
G105337 LOC103356977,LOC104930064,LOC102195804 non-coding downstream 349038 16334273 ~ 16339018 (-)
G105332 NA non-coding downstream 423637 16264201 ~ 16264419 (-)
G105436 NA non-coding upstream 493 16689083 ~ 16689305 (-)
G105443 NA non-coding upstream 66746 16755336 ~ 16755558 (-)
G105549 NA non-coding upstream 363915 17052505 ~ 17055622 (-)
G105577 NA non-coding upstream 429161 17117751 ~ 17118264 (-)
G105578 NA non-coding upstream 463581 17152171 ~ 17153593 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other downstream 13201 16524356 ~ 16674855 (-)
unc5a unc5a,LOC102788949 other downstream 584262 15960197 ~ 16103794 (-)
hnrnph1 hnrnph1,LOC102791917 other downstream 816107 15866060 ~ 15871949 (-)
tspan17 tspan17,LOC103361971 other downstream 1068948 15598343 ~ 15619108 (-)
G105086 NA other downstream 1553320 15133530 ~ 15134736 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other upstream 269053 16957643 ~ 16963536 (-)
tmsb1 NA other upstream 453492 17142082 ~ 17151616 (-)
frmpd3 frmpd3 other upstream 478306 17166896 ~ 17256932 (-)
nexmifb kiaa2022 other upstream 833551 17522141 ~ 17577811 (-)
kif3a kif3a other upstream 979494 17668084 ~ 17748547 (-)

Expression


Co-expression Network