G105577


Basic Information

Item Value
gene id G105577
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 17117751 ~ 17118264 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU141766
catacatacatacatacatacatacatacatacatacataacaaaCCCTAGATAATAAACAATTGCAGAACATTGTGAGTTGGTAAAGGTAAAAATAGTTTTGAGTGTTATCTCTAGCAAATGAGCACGATCCATTACTGCATCAAAACTGAAATGTCATTGAAAGTGGTGGGTGAAaccatattttgttttgttctatGGCTAagtgatttggttttgtgttttgtttgtgctcACTAACAAGTTTCCCAGACCCTCGTCCTCCAGTCCTAAATAATCCCAATAACCCAATCCCAAACGTGGGATTATTCCCGTGAAGTCAGTGGTCATCATATTGGCATTAGTCTTTAAAGTATGCACATATGCTGTCTCCATGAAATTAATTGTGGTATATATTAAAAATCCCCGCATTTCGTGTACCTTTAGTCTATATTTTCTTTCAGTCTGATTGTGGATAAACTACTGGTGGGGAAGAaccaaaata
>TU141767
catacatacatacatacatacatacatacatacatacataacaaaCCCTAGATAATAAACAATTGCAGAACATTGTGAGTTGGTAAAGGTAAAAATAGTTTTGAGTGTTATCTCTAGCAAATGAGCACGATCCATTACTGCATCAAAACTGAAATGTCATTGAAAGTGGTGGGTGAAaccatattttgttttgttctatGGCTAagtgatttggttttgtgttttgtttgtgctcACTAACAAGTTTCCCAGACCCTCGTCCTCCAGTCCTAAATAATCCCAATAACCCAATCCCAAACGTGGGATTATTCCCGTGAAGTCAGTGGTCATCATATTGGCATTAGTCTTTAAAGTATGCACATATGCTGTCTCCATGAAATTAATTGTGGTATATATTAAAAATCCCCG
>TU141769
tatatatatatatatatatatatacacatacatacatacatacatacatacatacatacatacatacataacaaaCCCTAGATAATAAACAATTGCAGAACATTGTGAGTTGGTAAAGGTAAAAATAGTTTTGAGTGTTATCTCTAGCAAATGAGCACGATCCATTACTGCATCAAAACTGAAATGTCATTGAAAGTGGTGGGTGAAaccatattttgttttgttctatGGCTAagtgatttggttttgtgttttgtttgtgctcACTAACAAGTTTCCCAGACCCTCGTCCTCCAGTCCTAAATAATCCCAATAACCCAATCCCAAACGTGGGATTATTCCCGTGAAGTCAGTGGTCATCATATTGGCATTAGTCTTTAAAGTATGCACATATGCTGTCTCCATGAAATTAATTGTGGTATATATTAAAAATCCCCGCATTTCGTGTACCTTTAGTCTATATTTTCTTTCAGTCTGATTGTGGATAAACTACTGGTGGGGAAGAaccaaaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141766 False 484 lncRNA 0.36 1 17117751 17118234
TU141767 False 408 lncRNA 0.36 1 17117827 17118234
TU141769 True 514 lncRNA 0.34 1 17117751 17118264

Neighbor

gene id symbol gene type direction distance location
kctd12b LOC107396469,LOC101170105,LOC102309695,LOC106928388 coding downstream 4170 17098532 ~ 17113581 (-)
ogt.1 ogt coding downstream 93024 17008128 ~ 17024727 (-)
gcna NA coding downstream 110357 17001410 ~ 17007394 (-)
nsdhl nsdhl coding downstream 122202 16989817 ~ 16995549 (-)
znf185 NA coding downstream 128752 16971172 ~ 16988999 (-)
znf711 znf711,zfx coding upstream 201 17118465 ~ 17125904 (-)
zgc:66447 LOC103370289,LOC101476930 coding upstream 8081 17126345 ~ 17138211 (-)
LOC120566760 NA coding upstream 35874 17154138 ~ 17158517 (-)
prps1b prps1,LOC104923196,LOC103391169,LOC101476181 coding upstream 41235 17159499 ~ 17164212 (-)
LOC120566998 LOC103359155,LOC104923198,LOC101474624,LOC106953605 coding upstream 223877 17342141 ~ 17343959 (-)
G105549 NA non-coding downstream 62129 17052505 ~ 17055622 (-)
G105443 NA non-coding downstream 362193 16755336 ~ 16755558 (-)
G105436 NA non-coding downstream 428446 16689083 ~ 16689305 (-)
G105435 NA non-coding downstream 429161 16688056 ~ 16688590 (-)
G105433 NA non-coding downstream 430022 16687479 ~ 16687729 (-)
G105578 NA non-coding upstream 33907 17152171 ~ 17153593 (-)
G105598 NA non-coding upstream 206196 17324460 ~ 17324955 (-)
G105597 LOC104923197,LOC104943958 non-coding upstream 216140 17334404 ~ 17335952 (-)
G105749 NA non-coding upstream 636950 17755214 ~ 17755915 (-)
G105759 NA non-coding upstream 710358 17828622 ~ 17831148 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other downstream 154215 16957643 ~ 16963536 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other downstream 442896 16524356 ~ 16674855 (-)
unc5a unc5a,LOC102788949 other downstream 1013957 15960197 ~ 16103794 (-)
hnrnph1 hnrnph1,LOC102791917 other downstream 1245802 15866060 ~ 15871949 (-)
tspan17 tspan17,LOC103361971 other downstream 1498643 15598343 ~ 15619108 (-)
tmsb1 NA other upstream 23818 17142082 ~ 17151616 (-)
frmpd3 frmpd3 other upstream 48632 17166896 ~ 17256932 (-)
nexmifb kiaa2022 other upstream 403877 17522141 ~ 17577811 (-)
kif3a kif3a other upstream 549820 17668084 ~ 17748547 (-)
LOC120567448 LOC103359144,LOC108240510,LOC107375047,LOC100701092,LOC102792911,LOC102297680,LOC101469512 other upstream 665296 17783560 ~ 17795391 (-)

Expression


Co-expression Network