G105578


Basic Information

Item Value
gene id G105578
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 17152171 ~ 17153593 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU141770
catttcctggttcttattctccataaacaacatgaaatcaaggagagggttaacttctcctgctacatATTTCCCACTGtagtcagaaagaacagaggagacactttgtttctctcactatgactctagagtcgctactcgctccgagcTCCGAAGGTAATCGccggcactctctcacttctctctaccacacactccccacacacacacacacgcagctcgacgcacacaccagcgcacaagtataaacatcaggccactttttaaggctacggcgagagctctgcgtggagccgacgcacaactataaaaaggcctttagtatgtgccatttctgagagaggggggggcaaggtggagagtgggggtgtggccttgaccaactgccactttgctcgtttgaaagccatgatgcctctctcttatgggtgggctaaattctctgggcgggcaaagcagagaaaggggaggtaaccttgctcctcatgacctcataaggagcaagattccagatcggcccatctgagctttcattttctcaaaggcagagcaggatacccagggctcggtttacacctatcgccatttctagccactgggggaccataggcaggctgggggaactcctattaatgttaaaaataaagtgaaatcataaagtgaaattttcatgccatgggccCTTTAATGGCTGGGatctattcaagtgtcccagtaagacgTAAACATTTAGCCAACATGAAGAATACCAGGAACCTGAAACTGATACAACTAAATAGAATTCAGCCATCCATTCATTCGCACctgggcttttcctactgtgacatgtcaaaatgccTTCTGTGAAACAAGGACATAATCCATCACCTGGTTCAAACCAATACACACAGCAAATTCTGTGTGTCAGAAAGCACGAGCAAGTTGAAGGCACCACTGCCGGGACTTGAACCTCAGTCCCTGAGGTGGTGGCCGAGTATTTGTCATGAACCAAAGttacatataataatataaatatggtGCAGGTGAATAGGTGCCTTGTATTGTCtcaaagggaaatttcaccaaTTTAACATAGTCAGTTTACTAATCAAGGGAAGTACGACTCAGCCTATGAAAGCAGTTTTATAATGTCATCTCCGGTTCGGGATGAACTTTGCTTTTTGCAATTATTTTTGGAAATTTTTGCTTTCAACATGTAGAAGAAATTACAGGAGACTATAATTTATAACAGAAACCAGTACAAATTGGGGCGTGAATTTTGTAAAAGGCGATTATTTAACAGCCAGACAGGGTCTAAAAAAATGGGTTACTGTATGGAAAAAGTAGAAACcataattttttgggcttgACCCATATAAGGGACAACAATTCAGGATATTAGCCTCTTGATCTGACTCTTTTGAAGTGCAATactaaaatgctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141770 True 1423 lncRNA 0.44 1 17152171 17153593

Neighbor

gene id symbol gene type direction distance location
zgc:66447 LOC103370289,LOC101476930 coding downstream 13960 17126345 ~ 17138211 (-)
znf711 znf711,zfx coding downstream 26267 17118465 ~ 17125904 (-)
kctd12b LOC107396469,LOC101170105,LOC102309695,LOC106928388 coding downstream 38590 17098532 ~ 17113581 (-)
ogt.1 ogt coding downstream 127444 17008128 ~ 17024727 (-)
gcna NA coding downstream 144777 17001410 ~ 17007394 (-)
LOC120566760 NA coding upstream 545 17154138 ~ 17158517 (-)
prps1b prps1,LOC104923196,LOC103391169,LOC101476181 coding upstream 5906 17159499 ~ 17164212 (-)
LOC120566998 LOC103359155,LOC104923198,LOC101474624,LOC106953605 coding upstream 188548 17342141 ~ 17343959 (-)
LOC120566521 LOC103359160,LOC108240568 coding upstream 197661 17351254 ~ 17357300 (-)
LOC120567258 LOC103359155,LOC104923198,LOC101474624 coding upstream 289629 17443222 ~ 17445060 (-)
G105577 NA non-coding downstream 33907 17117751 ~ 17118264 (-)
G105549 NA non-coding downstream 96549 17052505 ~ 17055622 (-)
G105443 NA non-coding downstream 396613 16755336 ~ 16755558 (-)
G105436 NA non-coding downstream 462866 16689083 ~ 16689305 (-)
G105435 NA non-coding downstream 463581 16688056 ~ 16688590 (-)
G105598 NA non-coding upstream 170867 17324460 ~ 17324955 (-)
G105597 LOC104923197,LOC104943958 non-coding upstream 180811 17334404 ~ 17335952 (-)
G105749 NA non-coding upstream 601621 17755214 ~ 17755915 (-)
G105759 NA non-coding upstream 675029 17828622 ~ 17831148 (-)
G105768 NA non-coding upstream 721243 17874836 ~ 17876295 (-)
tmsb1 NA other downstream 555 17142082 ~ 17151616 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other downstream 188635 16957643 ~ 16963536 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other downstream 477316 16524356 ~ 16674855 (-)
unc5a unc5a,LOC102788949 other downstream 1048377 15960197 ~ 16103794 (-)
hnrnph1 hnrnph1,LOC102791917 other downstream 1280222 15866060 ~ 15871949 (-)
frmpd3 frmpd3 other upstream 13303 17166896 ~ 17256932 (-)
nexmifb kiaa2022 other upstream 368548 17522141 ~ 17577811 (-)
kif3a kif3a other upstream 514491 17668084 ~ 17748547 (-)
LOC120567448 LOC103359144,LOC108240510,LOC107375047,LOC100701092,LOC102792911,LOC102297680,LOC101469512 other upstream 629967 17783560 ~ 17795391 (-)
LOC120566288 NA other upstream 703491 17857084 ~ 17859755 (-)

Expression


Co-expression Network