kif3a (kif3a)


Basic Information

Item Value
gene id kif3a
gene name kif3a
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 17668084 ~ 17748547 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU141942
TCACAGGAAAAGATCTGCAAAGCCAGATGCTGTGATCGAATCCCTTCTGCAGTGAAGACAGCGCAGAGGACACCTTGGTTTCACTGCAACTTCCATGTTACTTTAGGAAACAAATTCATTAGTCGAGTCTGAAGAATTTATTGTTCAACATtatttaaaagattaactgaataCACTGTATAGCTGGTATGGTTTTAAATGTGAATGAGCTGCACCTATGATAGGATTAAGACCTCTTGGCCAAGGGGACCTGTTATTTGGAACGCATTTCGGTGGCAGCAGCTTCTGTTCGAATAAAGCTCTTTTACCTTAGCACCTCTAGCATTAAGGAGGAATCAAGCATAAACATTTCACTTGCAAATTCATTGGTTTTTCAAATGAGCAACACTCTGAAATAAGATGTTGAAAATAGAAATTGTGGACCTATAAACTGCGTTCATATGCTCTGAAATGGGTTGAGTGTATTGAACACACTAAGTGTTTCGCAATGAACACCACTTTAGTTAAGTTGTAACTTCTGTATTACTGATTTCCTGCTTTCATACTAAACAGCCCATTCTGATATGAACACATTATAATTGAATTCTAATTAATGGTTTATTTTCACTTAAATTACAGGAAATGATTATACTCTGAGCACGAGTTGTAGCCTTAGTGgtattaaataaaagaaatcattaacatgaaagCGGAAAAAAGATACAAACACTAATGTGGAGGGAACAAGTAGAGGGGGATATGTAGTATCAAGTATGTAACTGAATAATGCATTTTATACTTTTTCTCCCTTATGAAGCATAGGGGCATGCATGCCAGCCAGCTCTTATGTTAGTGCCATTCGCTATTCTAAGCaagtctttttatttattgtcaaaTATCCGAACCCTTTGTGTTACATTCATTTCcactaaacatactgtatgcctTAGTTTAATGCACTAGTATGAGGTTTTTGTGGGTGATGATTTCATTTTATGATATTCTGTAGTGGAGGCAAACTGTAGtggagttttattttgtatcataatttatgtcaaatgtttacaTCCACCAAACCCCTGGA
>TU141943
TCACAGGAAAAGATCTGCAAAGCCAGATGCTGTGATCGAATCCCTTCTGCAGTGAAGACAGCGCAGAGGACACCTTGGTTTCACTGCAACTTCCATGTTACTTTAGGAAACAAATTCATTAGTCGAGTCTGAAGAATTTATTGTTCAACATtatttaaaagattaactgaataCACTGTATAGCTGGTATGGTTTTAAATGTGAATGAGCTGCACCTATGATAGGATTAAGACCTCTTGGCCAAGGGGACCTGTTATTTGTATTATAGTGTAAGACTGGATGTCATTTTAATGTCGCTCTGGAACGCATTTCGGTGGCAGCAGCTTCTGTTCGAATAAAGCTCTTTTACCTTAGCACCTCTAGCATTAAGGAGGAATCAAGCATAAACATTTCACTTGCAAATTCATTGGTTTTTCAAATGAGCAACACTCTGAAATAAGATGTTGAAAATAGAAATTGTGGACCTATAAACTGCGTTCATATGCTCTGAAATGGGTTGAGTGTATTGAACACACTAAGTGTTTCGCAATGAACACCACTTTAGTTAAGTTGTAACTTCTGTATTACTGATTTCCTGCTTTCATACTAAACAGCCCATTCTGATATGAACACATTATAATTGAATTCTAATTAATGGTTTATTTTCACTTAAATTACAGGAAATGATTATACTCTGAGCACGAGTTGTAGCCTTAGTGgtattaaataaaagaaatcattaacatgaaagCGGAAAAAAGATACAAACACTAATGTGGAGGGAACAAGTAGAGGGGGATATGTAGTATCAAGTATGTAACTGAATAATGCATTTTATACTTTTTCTCCCTTATGAAGCATAGGGGCATGCATGCCAGCCAGCTCTTATGTTAGTGCCATTCGCTATTCTAAGCaagtctttttatttattgtcaaaTATCCGAACCCTTTGTGTTACATTCATTTCcactaaacatactgtatgcctTAGTTTAATGCACTAGTATGAGGTTTTTGTGGGTGATGATTTCATTTTATGATATTCTGTAGTGGAGGCAAACTGTAGtggagttttattttgtatcataatttatgtcaaatgtttacaTCCACCAAACCCCTGGATATtctatttattaaattattttacacattttataaaaaaaaaaaaaaa
>XM_039813689.1
GCATGCGCAGTCTGACATAGACCTGACAACAAGCTATCGGATGTGAGAGCCCTTGATGATATGGGCATTGCGCTGGCATTTCAATTCTTCGGATTAGCTACCTAGCTAGAGTCAAATGAACAACGCCTTACAAATATTGAATTGTCAATTTTAGATGCTATAATCGCCTTTCTGTATTCTCACTATGCCGagcaataagctTGAGAAACCTGACAAGCAGGAGGTCAATGATAATGTCAAGGTGGTGGTGAGATGTCGTCCCTTCAACCAGAAAGAGAAGATGATGAGCCACAAACAGGCCGTCATTGTGGACGAGAATCGTGGGACCATAACGGTTAACAAACTGGAGACGCCCCATGAGCCTCCTAAGACTTTCACATTTGACACTGTGTTTGGACCAGACAGCAAACAGCTGGATGTCTACAATCTCACTGCCCGCCCCATAATTGACTCCGTATTAGAGGGATACAATgGCACGATTTTTGCATATGGGCAAACTGGCACAGGAAAAACGTTCACCATGGAGGGTGTGAGAGCAGTGCCAGAACTCCGAGGGATAATCCCAAACTCCTTTGCTCATGTTTTTGGTCACATTGCCAAGGCAGAGGGTGACACAAGGTTTTTGGTTCGTGTTTCATACCTGGAGATTTACAATGAGGAAGTGCGAGACCTGTTGGGCAAGGACCAGATGCAGAGGCTAGAGGTCAAAGAAAGACCAGATGTTGGCGTGTATATCAAAGACCTCTCTGGTTACGTCGTGAACAATGCAGATGACATGGACAGGATTATGACCATGGGCCACAAAAACCGTTCTGTCGGGGCCACAAACATGAATGAACACAGCTCCCGTTCTCATGCTATCTTCACCATCACCATCGAGTGCAGCGAGAAGGGTGTGGATGGAAACCAGCATGTGCGCATGGGAAAGCTTCATCTGGTTGATCTTGCGGGCTCGGAAAGACAGGGCAAGACTGGAGCAACAGGTCAGCGTTTAAAGGAAGCGACAAAgattaatctctctctctccacgctGGGTAACGTCATCTCTGCCCTGGTGGACGGCAAGAGTACACACGTGCCCTACAGGAACTCTAAACTAACCCGTCTGCTGCAGGATTCACTAGGAGGAAACTCCAAGACCATGATGTGTGCAAATATAGGACCTGCAGACTATAACTATGATGAGACCATCAGTACCCTGCGCTACGCTAATAGGGCTAAAAACATCAAGAACAAAGCCAGGATCAATGAGGATCCAAAGGATGCCCTTTTGCGCCAGTTTCAGAAGGAGATTGAGGAGCTAAAGAAGAAACTGGTGGAAGGTGAAGAGATATCTGGATCAGAGGGAAGTGGATCAGAAGAGATGGATGAGGGTGATGATGAAGGAGGGGTGGCAGGAGAAGGCCGCAGAAAAAGAAGAGacagtggcagcagcagcagcagcaatagcTCAGAATTTGCCTGCTCCTCCTCAGTGCCACCACCCACTGAGACAGAGGATAAACCTCAGAATAAAGAAAGAGGGAGGAAGAAGGTTTCTCCAGACAAGATGGTGGAGATGCAGGCAAAGATTGAAGAGGAAAGGAAGGCGTTGGAGGCCAAGCTggacatggaggaggaggagaggaacaaGGCAAGGGCAGAGCTGGAGAAGAGGGAGAAGGACCTACTTAAAGCTCAGCAGGAGCATCACCTTTTGCTGGATAAATTGTCGGCCTTGGAGAAGAAGGTGATCGTGGGTGGGGTGGATCTCTTGGCCAAGGCTGAGGAGCAGGAGAAGCTTTTGCAGGAGTCCAACAATGAACTGGAAGAACGTCGCAGGAGAGCGGAGCGGCTGCGAAGGGAGctggaggagaaagagCAAGAACGTCTGGACATAGAAGAGAAGTACACTAGTCTGCAGGAGGAGGCTCAAGGAAAGACCAAGAAGCTGAAGAAAGTATGGACCATGCTGATGGCTGCCAAATCAGAAATGGCAGATCTGCAGCAAGAGCATCACAGAGAGATTGAGGGCCTCCTGGAGAACATCCGCCAGCTGAGTCgagagctgcgtctccagatgcTCATCATAGACAACTTTATTCCCCAGGAATACcagGAGATGATAGAGAATTACGTGCACTGGAATGAAGACATTGGAGAATGGCAGCTGAAATGTGTGGCATACACTGGCAACAATATGAGAAAACAGACCCCTGCTccagacaaaaaagaaaaagatCCATTTGAGGTGGATTTGTCCCATGTGTATCTGGCCTACACAGAGGAAAGcatgggattgtCACTGATGAAACTCAAAAAACAAAGAAcccaaaaaaagggaaaaggggccccccaaaaaaCTCCTCACAGGAAAAGATCTGCAAAGCCAGATGCTGTGATCGAATCCCTTCTGCAGTGAAGACAGCGCAGAGGACACCTTGGTTTCACTGCAACTTCCATGTTACTTTAGGAAACAAATTCATTAGTCGAGTCTGAAGAATTTATTGTTCAACATtatttaaaagattaactgaataCACTGTATAGCTGGTATGGTTTTAAATGTGAATGAGCTGCACCTATGATAGGATTAAGACCTCTTGGCCAAGGGGACCTGTTATTTGTATTATAGTGTAAGACTGGATGTCATTTTAATGTCGCTCTGGAACGCATTTCGGTGGCAGCAGCTTCTGTTCGAATAAAGCTCTTTTACCTTAGCACCTCTAGCATTAAGGAGGAATCAAGCATAAACATTTCACTTGCAAATTCATTGGTTTTTCAAATGAGCAACACTCTGAAATAAGATGTTGAAAATAGAAATTGTGGACCTATAAACTGCGTTCATATGCTCTGAAATGGGTTGAGTGTATTGAACACACTAAGTGTTTCGCAATGAACACCACTTTAGTTAAGTTGTAACTTCTGTATTACTGATTTCCTGCTTTCATACTAAACAGCCCATTCTGATATGAACACATTATAATTGAATTCTAATTAATGGTTTATTTTCACTTAAATTACAGGAAATGATTATACTCTGAGCACGAGTTGTAGCCTTAGTGgtattaaataaaagaaatcattaacatgaaagCGGAAAAAAGATACAAACACTAATGTGGAGGGAACAAGTAGAGGGGGATATGTAGTATCAAGTATGTAACTGAATAATGCATTTTATACTTTTTCTCCCTTATGAAGCATAGGGGCATGCATGCCAGCCAGCTCTTATGTTAGTGCCATTCGCTATTCTAAGCaagtctttttatttattgtcaaaTATCCGAACCCTTTGTGTTACATTCATTTCcactaaacatactgtatgcctTAGTTTAATGCACTAGTATGAGGTTTTTGTGGGTGATGATTTCATTTTATGATATTCTGTAGTGGAGGCAAACTGTAGtggagttttattttgtatcataatttatgtcaaatgtttacaTCCACCAAACCCCTGGATATtctatttattaaattattttacacattttatctCA

Function

symbol description
kif3a Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Acts upstream of or within several processes, including Notch signaling pathway; cilium assembly; and photoreceptor cell outer segment organization. Part of kinesin complex. Is expressed in several structures, including eye; heart; integument; liver; and pleuroperitoneal region. Orthologous to human KIF3A (kinesin family member 3A).

NR:

description
PREDICTED: kinesin-like protein KIF3A isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0007018 microtubule-based movement biological_process
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005524 ATP binding molecular_function
GO:0003777 microtubule motor activity molecular_function
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K10394 KIF3A; kinesin family member 3A

RNA

RNA id representative length rna type GC content exon number start site end site
TU141942 False 1063 lncRNA 0.36 2 17729591 17730694
TU141943 False 1153 lncRNA 0.35 2 17668084 17730694
XM_039813689.1 True 3488 mRNA 0.44 20 17729553 17748547

Neighbor

gene id symbol gene type direction distance location
zdhhc15b zdhhc15 coding downstream 38187 17625557 ~ 17629897 (-)
abcb7 abcb7,LOC102795903 coding downstream 49537 17587676 ~ 17618547 (-)
rlim rlim,LOC104950806 coding downstream 148608 17510949 ~ 17519476 (-)
glod5 glod5 coding downstream 157542 17507123 ~ 17510542 (-)
LOC120566359 LOC106925651,LOC106940816,LOC108240559 coding downstream 169348 17494973 ~ 17498736 (-)
sh3rf2 LOC104943536 coding upstream 1116 17749663 ~ 17769267 (-)
LOC120566774 LOC104938341,LOC103359140,LOC104943540,LOC100701639 coding upstream 86170 17834717 ~ 17843371 (-)
gnpda1 LOC104943541,LOC104938351,LOC101467942,LOC102791355,LOC102296048 coding upstream 95336 17843883 ~ 17846554 (-)
hspa4b hspa4 coding upstream 99229 17847776 ~ 17856376 (-)
gdf9 gdf9 coding upstream 112313 17860860 ~ 17864154 (-)
G105597 LOC104923197,LOC104943958 non-coding downstream 332132 17334404 ~ 17335952 (-)
G105598 NA non-coding downstream 343129 17324460 ~ 17324955 (-)
G105578 NA non-coding downstream 514491 17152171 ~ 17153593 (-)
G105577 NA non-coding downstream 549820 17117751 ~ 17118264 (-)
G105549 NA non-coding downstream 612462 17052505 ~ 17055622 (-)
G105749 NA non-coding upstream 6667 17755214 ~ 17755915 (-)
G105759 NA non-coding upstream 80075 17828622 ~ 17831148 (-)
G105768 NA non-coding upstream 126289 17874836 ~ 17876295 (-)
G105769 sept8 non-coding upstream 128485 17877032 ~ 17881994 (-)
G105784 gabrb2,LOC102788768 non-coding upstream 180285 17928832 ~ 17933470 (-)
nexmifb kiaa2022 other downstream 90273 17522141 ~ 17577811 (-)
frmpd3 frmpd3 other downstream 411152 17166896 ~ 17256932 (-)
tmsb1 NA other downstream 516468 17142082 ~ 17151616 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other downstream 704548 16957643 ~ 16963536 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other downstream 993229 16524356 ~ 16674855 (-)
LOC120567448 LOC103359144,LOC108240510,LOC107375047,LOC100701092,LOC102792911,LOC102297680,LOC101469512 other upstream 35013 17783560 ~ 17795391 (-)
LOC120566288 NA other upstream 108537 17857084 ~ 17859755 (-)
sfxn1 sfxn1,LOC103359221,LOC100705454,LOC106517750,LOC103471194 other upstream 238649 17987196 ~ 17995350 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other upstream 318878 18067425 ~ 18068492 (-)
reep2 reep2,LOC102782871 other upstream 537411 18285958 ~ 18314415 (-)

Expression


Co-expression Network