G105759


Basic Information

Item Value
gene id G105759
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 17828622 ~ 17831148 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142028
CAAGTGCTTGctgtgataataataattaaaaaaaaaagtgtcttacGAGCTTACCGTTTCCATAATCAAGTATCATCGAGTTAACATCACAGCAAACATCAGCATACAGTTCTTTGTTTCGAGAAGTACCACACAAAGACATACAGTTCCACCTTTAATCAACGGAGGAAAAGATCAACACTACAGAAGAAAAATAATACAGAGGGGTGggtaggtatatatatatataaaaaagcatTATTTGGAGACAAATACACCACATTTTCTTTACAATGGATTATATGTACATATTCTATTTTTTTAAGCAAagcaaatgtttttcttttgtagaGAAAGCCTATACCAGTGAAACGATCTGCCCTTGATAATTCTGAAAAGTTAATGTCTGCATATGCTATATATAAAATAGATTTTCAAACAAAATTTGGGTAGTGCAAATCTTTTCTTAGATTCAAGCTGGTTGATTACTTTCACAAacagtttgtgtgtgaaaaagaCTGACTCCTATCCTATTCACAGTATTACACAATTTGACcaaagctgtaaaaaaaaaaaagaaaaagaaaaaaagtgtttaaaaaaacaaaacaaagaactgAACATTTGACTTCTAGGAGCTAGTTAGTTTAAAATCGCACGTGTTGAATTTGTCTGTGCTTGCTTTGGTCACCTTGTAGTCAAACGTTAAATaggcttttttttgtgtgtgcagattAATTACTGACTAAGTGTATCTTTTCCTGAAAATCTGGCCTGCAGAGATAATGTGAATATCCTGTACGCAAATAGCTtatactggaaaaaaaaactgaaataatactgaaataaaaaaggaagcaaCAACATCCTGTTATGCGATGGTGACATATGATCTGTCGTTTCTATTGCATATTCAGTTGTCCTCAAAAATGTACAAGAAAGTATGCAAGGATACATTTTTTGAGCAAGAAGAGGCAAGTGTGCGATTTCatacacataatatatacacatatacatatatacacacatatatatatatatacacatatatatatctgtTTAAATGAACAGCAGCAGATATTTGGATACACTGAATGTGAAAGTAACCCATGAGTAAACCCTATACAGTTAATGAAGATGGTTTTCAACTATTTTGAATTAAACATCATAGAGAAAAATAACAAGTATTCTTTTGCTGAGCCTGGGAATGAATGACGAGAGTTTTGCACAACATTCCTAAAACTTTTCTAatcctgacaaaaaaaaaaaaaacatcataaatcACAGAAGTAGACACATTATGGGAATTCAAACTGACCGTTTTTTGGTTCTTGAAGTCAGGACATAAAACCAGTGAGTGAACCAGACATTAAGTTTCAACAACCTGAGCACGGGAGCGGTTCTAAATCTATAAAGGAGTGCTGTATATTTGTTGGGATAGTTAAGCAACACAATTTGACATTTTGCATATTTAAATGAGCACTTGACACATTTATCCAATTATTTTTTAACTGGCAGGGCATCATCTTTAATCTGTCAAGCTTTTCTTCTTTTGAATTAAATGAATTCCTCTTTAAGGTTAACATTCATGTCAAAAACCTTGGTTTTGTTTTGTGCTTTGAACACACTACGTGACAATCTGAGCTGGGAACTGATGAAAATGTTGCAGCACATTTTCCCACTTACTTGCACAACACAAAGGGTTACTGACAGACCTACATTATTTTGTGTGATTACACAACACATCTGTGAGTGCCTTGTGTTAAAATACAGCTCAGTTATCACTCATTAATAATGACCTCAATCCAGTGGGCAGAATCGATTTGAGGATATATGTATAAACTTCAATACTGGGACTAGGTTCCCTCATCTGATAGAAACACTGACCCAACTTTCAGCATCACTGAAAACAGACAAAACCGGAGTTTGGCACTGAAATTGTTCCCAGAGAATAAAGGACCCATTTTGCCTGCCTCCCCAGTCAGTGACGCTACACTTTCACTGTCACATGACTCCATGAGGTGAATGATGCTAAGAGCTTTTAAACATTTGGGCTCGACTAcctaacagacagacacagaaacatgtcAATGTACTAAAGACACACGGACATTAAGACAAGGTGCCGACAGGGCGCTAAAGGAGCAGAAGGCAAAACCGGAGGGGTCAAAGGTAATCAGCAGCGGTGGGAGGTTTATAGGGTAATGAATCTGCCGACGCCTGATCCAAAGAGCTGTATACACAAGCAGTCCGTCACGCAAACCGTTCATTGTAAAGGAATAGTTCCACAATTTGGGAAATGCGCCTACTCACTTTCTTTTCAAGAAAACTGATACCACTTACTAGGTATGTAAAGCTACAGTCAggagccagttagcttagcataaaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142028 True 2369 lncRNA 0.36 2 17828622 17831148

Neighbor

gene id symbol gene type direction distance location
sh3rf2 LOC104943536 coding downstream 59355 17749663 ~ 17769267 (-)
atrx atrx coding downstream 105608 17679700 ~ 17723014 (-)
zdhhc15b zdhhc15 coding downstream 198725 17625557 ~ 17629897 (-)
abcb7 abcb7,LOC102795903 coding downstream 210075 17587676 ~ 17618547 (-)
rlim rlim,LOC104950806 coding downstream 309146 17510949 ~ 17519476 (-)
LOC120566774 LOC104938341,LOC103359140,LOC104943540,LOC100701639 coding upstream 3569 17834717 ~ 17843371 (-)
gnpda1 LOC104943541,LOC104938351,LOC101467942,LOC102791355,LOC102296048 coding upstream 12735 17843883 ~ 17846554 (-)
hspa4b hspa4 coding upstream 16628 17847776 ~ 17856376 (-)
gdf9 gdf9 coding upstream 29712 17860860 ~ 17864154 (-)
sowahab NA coding upstream 39054 17870202 ~ 17871569 (-)
G105749 NA non-coding downstream 72707 17755214 ~ 17755915 (-)
G105597 LOC104923197,LOC104943958 non-coding downstream 492670 17334404 ~ 17335952 (-)
G105598 NA non-coding downstream 503667 17324460 ~ 17324955 (-)
G105578 NA non-coding downstream 675029 17152171 ~ 17153593 (-)
G105577 NA non-coding downstream 710358 17117751 ~ 17118264 (-)
G105768 NA non-coding upstream 43688 17874836 ~ 17876295 (-)
G105769 sept8 non-coding upstream 45884 17877032 ~ 17881994 (-)
G105784 gabrb2,LOC102788768 non-coding upstream 97684 17928832 ~ 17933470 (-)
G105806 atp7a non-coding upstream 147164 17978312 ~ 17980298 (-)
G105820 NA non-coding upstream 184303 18015451 ~ 18015927 (-)
LOC120567448 LOC103359144,LOC108240510,LOC107375047,LOC100701092,LOC102792911,LOC102297680,LOC101469512 other downstream 33231 17783560 ~ 17795391 (-)
kif3a kif3a other downstream 80075 17668084 ~ 17748547 (-)
nexmifb kiaa2022 other downstream 250811 17522141 ~ 17577811 (-)
frmpd3 frmpd3 other downstream 571690 17166896 ~ 17256932 (-)
tmsb1 NA other downstream 677006 17142082 ~ 17151616 (-)
LOC120566288 NA other upstream 25936 17857084 ~ 17859755 (-)
sfxn1 sfxn1,LOC103359221,LOC100705454,LOC106517750,LOC103471194 other upstream 156048 17987196 ~ 17995350 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other upstream 236277 18067425 ~ 18068492 (-)
reep2 reep2,LOC102782871 other upstream 454810 18285958 ~ 18314415 (-)
LOC120566257 NA other upstream 856640 18687788 ~ 18691410 (-)

Expression


Co-expression Network