LOC120567448 (LOC103359144,LOC108240510,LOC107375047,LOC100701092,LOC102792911,LOC102297680,LOC101469512)


Basic Information

Item Value
gene id LOC120567448
gene name LOC103359144,LOC108240510,LOC107375047,LOC100701092,LOC102792911,LOC102297680,LOC101469512
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 17783560 ~ 17795391 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142030
TCCTCTCCGCCAGCTGCACGCCGCCCGTGACTAGATTTTCATGAAAAACTGTACAGATGAACCAACATCAGTCCGCTTTGTGTCGATCGTCTGCAAATGTCATTTTCCTTTAAGATGATGTAAGACATTACTTCATGGGacgatttctctctctctctctctctctctctctctctctctctctctctgcaagaGAACAGCTTGGAGCAACATTATCTTAAAGCTTCTGCCGGGCCAAACGTTTCCGCACTCAGCAGTTTGGAGAGATGGGTGCGCACAGGAGTCCCACTTCCATCCTCCTCTCTGCGAGCAACCTCGGAGAATGTTTCAGCATCCCAGTTGTCAAGAGCGACGCTTAGTAGCAGAATGATGGGATGCATGCACATTATTCAGTTGCTCCTGGACTGATGTGACTGAACCAGAAGCCAGACGCAAGACCTTTCCAcagaaaacttaaaacaaaaaacaaaaaaaggtgGGTCCTCAAGGTGGTTGTCATCACACTGTGACTGCTGCTGCAAGAGCCACAAAAGTGAGCGTGAAGGAGAGAGCGGCACTTCCTTCAATGAGCTCTCCACTTCCTGTTCTGAGACCCAGTCGGAGGCCAGTTCCCCTCAAGGAACCGTGATCTGTGGTCCCGTGAGCCGGCGCGCCAATGTCCAGACGCTGGACCGTCCCATGCCCAAAGGACCAGTTCACATGCTGCAGCAGGCAGAGATGCGCCGCAAGACTGACATGCTACGAGTGAGAACCTTCGGGGTCCGAGAACGAGAGGCCGCAAAAAGGAAAGCCAACAAGGAGAAGATGACTCCAGAGCAGGAGCTGGAGAAATGCATCCAGGAGTTCCGGCGCATCAGAATTCCTGATCGCTTTCCGGAGAGGAAGTACATGTGGCAATCAGAGCTCCTGAGAAAGTACCGTCTCTAAATATGAgtgggaagaagaagaaagagatggAAGTATCATGTCACCATCAATGGAGAGTATTAACTGCTTAGGCAATAGACTGCACTCTCTAAGGCACATACTGTATTAGAAAAAAACTATGGCCACTTTCCCGCCAGCATGACTAGCTGAGCACACAAAGTACAAGGCAGTGTGAGTCATTGATTTGTAAAGTATGCACAGTGTTGTGGATGATATGCACATGTGTAAATCAGGTTACTCCTGTTGGGGCTTACATCACTGACCCTGTTCTCACTTCAGATAGCAGACAGTGTACTAACTACTATTATATCACTAGTTGAAGCAACAAAGCAACCTCAGGGGCAACATCATTTCAAATCATCAACCTATCACATACTTTATGTGCAATTGCCCACAATAGCGAATTTTTTAAAATGGATGTACCCATATGGTGCTGAGAGTTAGCAATGGAATATCACTATAGCCTACTCCACTGATAACACATATACTTAAACAAGGCTTTGATATCGGCACTGCATGTCATTTCACCCTTAGCATAATTATGCAAtatcaaacaaactttaaattcACTGTTTTGTGTGATGGGTAAAAATGGTGTGTTGTGACTGGGGCTAACTTAAATGAGGAAAGCACTGCCTAGACCTGTTTGCCATTGTAAAACGTTTTGTCCAATGTTGTCATTATGTGTTGGATAGATGATGTTGTGTAGGAGATAGAGTAATGTCAATGGATATTTGACTAATCCTTGATTGTAAATGtgcaaaaaaactaataaatggGTTTGAATTGTA
>XM_039814419.1
CGATGAGtctctgagcaagacactgCATGGGACCTAACCCCTCACCCGTCTCTCGGGATAAGCGCGTCAGCTAAAAGCGTTAAATGTAAATGCGAAAGCCTCTGTGAAGACTCAGAAGAAGGGATTAAAATCCGCAACGCTGGATGTTAAAACTGCATTAGACCTGAATCCTCTCCGCCAGCTGCACGCCGCCCGTGACTAGATTTTCATGAAAAACTGTACAGATGAACCAACATCAGTCCGCTTTGTGTCGATCGTCTGCAAATGTCATTTTCCTTTAAGATGATGTAAGACATTACTTCATGGGacgatttctctctctctctctctctctctctctctctctctctctctctgcaagaGAACAGCTTGGAGCAACATTATCTTAAAGCTTCTGCCGGGCCAAACGTTTCCGCACTCAGCAGTTTGGAGAGATGGGTGCGCACAGGAGTCCCACTTCCATCCTCCTCTCTGCGAGCAACCTCGGAGAATGTTTCAGCATCCCAGTTGTCAAGAGCGACGCTTAGTAGCAGAATGATGGGATGCATGCACATTATTCAGTTGCTCCTGGACTGATGTGACTGAACCAGAAGCCAGACGCAAGACCTTTCCAcagaaaacttaaaacaaaaaacaaaaaaaggtttgtttgactttttttgatggAGGGAAATTTGAGAGTGACGTGAGGATTGTATTTCTTTGAAGTCACAGTAATGACCCATTGCAGTGGATGTGTGTTACATGATGCGCTCACTTAGGATAATCGATTCTGTTCAAAAAGCATGCACCGTGGACAGGCACATTTACGCATGGAGTTAAAGGATATACTGTAGGCCCACATTGGGATTGTTTGTCATAAGACATTGTATGCAAGGACTGCAGCTTGAATCAACACTATGCTTTGGGTCTGAGGGCATTAACACCATGCAGCTGCATCCCACACCCTGAACTTCTGGGACGTTTGCGCTCCGTGATCGAAGCTCAGATTTcgtgctgaaaaaaaaatggcacTGAGCGAAAACTGCAAAACGCAACCTGCAACGGGGCAAACCCCTCCATCGGATGTTATTGAGCTAAACGTAGGTGGACAGGTGTATTACACTCGCCATGCCACCTTGACAAGCTTTCCAAATTCCTTACTTGGGAATCTGTTCTCTAACAAGAAGGGGTCCTCAAATGACTTGTCCCGGGACCTCAGAGGACGTTATTTTATTGACAGAGATGGCTTTTTGTTTCGGTATGTATTGGATTATCTTAGAGACAAGCAAGTTGTCCTCCCTGACCACTTCCCCGAGAGAGGAAGGTTGAAACGAGAGGCGGAATACTTCCAGCTGCCAGATTTGGCCAAACTTTTATCTTCCGATGATTCTAAACTATTTCCAGACGACTTGTGCTACAGTGATTTTGATGATGAGTCGCAGGGCAGCGACCAGAGGTTTTACCCCCCTTACTCACTGGACAGGAGGTATGGCTACATAACGGTCACTTTCAAAAGCGCTTGCGCTGACGGAGGCAGAGAAAGTCAAATTGATGTCAAGGCCAAAAAGTTACCGAGGATCTTCATCAGCAGTAGAATTGGCTTGGCGAAAGAGGTATTTGGAGACGCCCTGAATGAGAACAGGGACTCGGACAGACCACCGGACCGTTACACCTCCAGGTTTTACCTCAAGTTCAGGCACCTGGAGAGAGCATTTGACATGCTGTCAGAGAGCGGCTTTCACATTGTGGCCTGCAATTCGTCCCTGACTGCGTCCTCCATCGCTCATTACGCGGATGACAGGGTCTGGTCCAATTACGCACAGTACATCTTCTACCgtgGGTCCTCAAGGTGGTTGTCATCACACTGTGACTGCTGCTGCAAGAGCCACAAAAGTGAGCGTGAAGGAGAGAGCGGCACTTCCTTCAATGAGCTCTCCACTTCCTGTTCTGAGACCCAGTCGGAGGCCAGTTCCCCTCAAGGAACCGTGATCTGTGGTCCCGTGAGCCGGCGCGCCAATGTCCAGACGCTGGACCGTCCCATGCCCAAAGGACCAGTTCACATGCTGCAGCAGGCAGAGATGCGCCGCAAGACTGACATGCTACGAGTGAGAACCTTCGGGGTCCGAGAACGAGAGGCCGCAAAAAGGAAAGCCAACAAGGAGAAGATGACTCCAGAGCAGGAGCTGGAGAAATGCATCCAGGAGTTCCGGCGCATCAGAATTCCTGATCGCTTTCCGGAGAGGAAGTACATGTGGCAATCAGAGCTCCTGAGAAAGTACCGTCTCTAAATATGAgtgggaagaagaagaaagagatggAAGTATCATGTCACCATCAATGGAGAGTATTAACTGCTTAGGCAATAGACTGCACTCTCTAAGGCACATACTGTATTAGAAAAAAACTATGGCCACTTTCCCGCCAGCATGACTAGCTGAGCACACAAAGTACAAGGCAGTGTGAGTCATTGATTTGTAAAGTATGCACAGTGTTGTGGATGATATGCACATGTGTAAATCAGGTTACTCCTGTTGGGGCTTACATCACTGACCCTGTTCTCACTTCAGATAGCAGACAGTGTACTAACTACTATTATATCACTAGTTGAAGCAACAAAGCAACCTCAGGGGCAACATCATTTCAAATCATCAACCTATCACATACTTTATGTGCAATTGCCCACAATAGCGAATTTTTTAAAATGGATGTACCCATATGGTGCTGAGAGTTAGCAATGGAATATCACTATAGCCTACTCCACTGATAACACATATACTTAAACAAGGCTTTGATATCGGCACTGCATGTCATTTCACCCTTAGCATAATTATGCAAtatcaaacaaactttaaattcACTGTTTTGTGTGATGGGTAAAAATGGTGTGTTGTGACTGGGGCTAACTTAAATGAGGAAAGCACTGCCTAGACCTGTTTGCCATTGTAAAACGTTTTGTCCAATGTTGTCATTATGTGTTGGATAGATGATGTTGTGTAGGAGATAGAGTAATGTCAATGGATATTTGACTAATCCTTGATTGTAAATGtgcaaaaaaactaataaatggGTTTGAATTGTA

Function

NR:

description
PREDICTED: BTB/POZ domain-containing protein KCTD16-like

GO:

id name namespace
GO:0051260 protein homooligomerization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142030 False 1718 TUCP 0.45 2 17783560 17795223
XM_039814419.1 True 3061 mRNA 0.46 2 17783560 17795391

Neighbor

gene id symbol gene type direction distance location
sh3rf2 LOC104943536 coding downstream 14293 17749663 ~ 17769267 (-)
atrx atrx coding downstream 60546 17679700 ~ 17723014 (-)
zdhhc15b zdhhc15 coding downstream 153663 17625557 ~ 17629897 (-)
abcb7 abcb7,LOC102795903 coding downstream 165013 17587676 ~ 17618547 (-)
rlim rlim,LOC104950806 coding downstream 264084 17510949 ~ 17519476 (-)
LOC120566774 LOC104938341,LOC103359140,LOC104943540,LOC100701639 coding upstream 39326 17834717 ~ 17843371 (-)
gnpda1 LOC104943541,LOC104938351,LOC101467942,LOC102791355,LOC102296048 coding upstream 48492 17843883 ~ 17846554 (-)
hspa4b hspa4 coding upstream 52385 17847776 ~ 17856376 (-)
gdf9 gdf9 coding upstream 65469 17860860 ~ 17864154 (-)
sowahab NA coding upstream 74811 17870202 ~ 17871569 (-)
G105749 NA non-coding downstream 27645 17755214 ~ 17755915 (-)
G105597 LOC104923197,LOC104943958 non-coding downstream 447608 17334404 ~ 17335952 (-)
G105598 NA non-coding downstream 458605 17324460 ~ 17324955 (-)
G105578 NA non-coding downstream 629967 17152171 ~ 17153593 (-)
G105577 NA non-coding downstream 665296 17117751 ~ 17118264 (-)
G105759 NA non-coding upstream 33231 17828622 ~ 17831148 (-)
G105768 NA non-coding upstream 79445 17874836 ~ 17876295 (-)
G105769 sept8 non-coding upstream 81641 17877032 ~ 17881994 (-)
G105784 gabrb2,LOC102788768 non-coding upstream 133441 17928832 ~ 17933470 (-)
G105806 atp7a non-coding upstream 182921 17978312 ~ 17980298 (-)
kif3a kif3a other downstream 35013 17668084 ~ 17748547 (-)
nexmifb kiaa2022 other downstream 205749 17522141 ~ 17577811 (-)
frmpd3 frmpd3 other downstream 526628 17166896 ~ 17256932 (-)
tmsb1 NA other downstream 631944 17142082 ~ 17151616 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other downstream 820024 16957643 ~ 16963536 (-)
LOC120566288 NA other upstream 61693 17857084 ~ 17859755 (-)
sfxn1 sfxn1,LOC103359221,LOC100705454,LOC106517750,LOC103471194 other upstream 191805 17987196 ~ 17995350 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other upstream 272034 18067425 ~ 18068492 (-)
reep2 reep2,LOC102782871 other upstream 490567 18285958 ~ 18314415 (-)
LOC120566257 NA other upstream 892397 18687788 ~ 18691410 (-)

Expression


Co-expression Network