G105820


Basic Information

Item Value
gene id G105820
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 18015451 ~ 18015927 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142111
ACTCAATGGATACTCAACGGTTACAAGGCTATAGATTATTTTCCTCTTCGATGGATGACCAATGTCTTATTATCCGAACAATACAACATGCACACCTCAGGTTTGGGAGTTCCAGTGTGTACATTTTGTTTCTCTTCAGTGCTGCAGGCCTCCACCTCAGCCTCCTGCTTGGGGGTCTTAGATCCTGGAAGGCTGGGAGGCCTGTTTGGAGTGAGGACCACGGGGAGATCTTTGCTTTCTGAGTGCTGGGGGGCAGCAGCAGGGGCAGAGGATGTGCTCGGTACAGGCTTCTCTTTTTTCACAGATTCAACCTATCCACTGAGTTTTCTTGGCTAACACTTTCACCTCTGAGGTAACTGCACTGTGTCGCTTTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142111 True 376 lncRNA 0.49 2 18015451 18015927

Neighbor

gene id symbol gene type direction distance location
LOC120567416 LOC104938463,LOC103391208,LOC103359220,LOC100705713,LOC105026079 coding downstream 14622 17995975 ~ 18000829 (-)
fbxl3l NA coding downstream 46671 17959879 ~ 17968780 (-)
sowahab NA coding downstream 143882 17870202 ~ 17871569 (-)
gdf9 gdf9 coding downstream 151297 17860860 ~ 17864154 (-)
hspa4b hspa4 coding downstream 159075 17847776 ~ 17856376 (-)
LOC120566259 adra1b,LOC104967953 coding upstream 65277 18081204 ~ 18090466 (-)
egr1 egr1 coding upstream 177290 18193217 ~ 18197415 (-)
kdm3b kdm3b coding upstream 299886 18315813 ~ 18343775 (-)
spon2a LOC103359201,LOC104954676,LOC104922704 coding upstream 329466 18345393 ~ 18361658 (-)
ctbp1 LOC107375331,LOC102204710,LOC101481404,LOC102780827,LOC100707048,LOC104922705,LOC103359200 coding upstream 351244 18367171 ~ 18382380 (-)
G105806 atp7a non-coding downstream 35153 17978312 ~ 17980298 (-)
G105784 gabrb2,LOC102788768 non-coding downstream 81981 17928832 ~ 17933470 (-)
G105769 sept8 non-coding downstream 133457 17877032 ~ 17881994 (-)
G105768 NA non-coding downstream 139156 17874836 ~ 17876295 (-)
G105759 NA non-coding downstream 184303 17828622 ~ 17831148 (-)
G105827 LOC108238064 non-coding upstream 6510 18022437 ~ 18023896 (-)
G105834 c1qtnf2,LOC103471225 non-coding upstream 17480 18033407 ~ 18035248 (-)
G105835 NA non-coding upstream 19455 18035382 ~ 18035757 (-)
G105967 LOC100708117 non-coding upstream 534183 18550110 ~ 18551684 (-)
G106057 NA non-coding upstream 694115 18710042 ~ 18729032 (-)
sfxn1 sfxn1,LOC103359221,LOC100705454,LOC106517750,LOC103471194 other downstream 20101 17987196 ~ 17995350 (-)
LOC120566288 NA other downstream 155696 17857084 ~ 17859755 (-)
LOC120567448 LOC103359144,LOC108240510,LOC107375047,LOC100701092,LOC102792911,LOC102297680,LOC101469512 other downstream 220060 17783560 ~ 17795391 (-)
kif3a kif3a other downstream 266904 17668084 ~ 17748547 (-)
nexmifb kiaa2022 other downstream 437640 17522141 ~ 17577811 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other upstream 51498 18067425 ~ 18068492 (-)
reep2 reep2,LOC102782871 other upstream 270031 18285958 ~ 18314415 (-)
LOC120566257 NA other upstream 671861 18687788 ~ 18691410 (-)
rgs14b rgs14 other upstream 1001825 19017752 ~ 19044951 (-)
LOC120566717 LOC102215832 other upstream 1200062 19215989 ~ 19250436 (-)

Expression


Co-expression Network