reep2 (reep2,LOC102782871)


Basic Information

Item Value
gene id reep2
gene name reep2,LOC102782871
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 18285958 ~ 18314415 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142250
GAGCAGAGCAGCTTGGAGCCAGACTGCAGAAGCACATCCTCAGCTGCTGCGAGCCCACCCAACAGCTCAGCAGGGCGGACAGGCAGCACCGGGCAGCCTCACGGTTCACATCGCATCACACCGCGTCCTAGAGGGGAATGGGGGGCACCCAGCCCGCTAGCTAACTTACTAGATTTCTCTAGAAGCGGTGAAGGCTCACGGCCGGCGCTCCAAAAAGATGGTATCCTGGATGATTTCGAGGATAGTCGTCCTTGCCTTTGGGACGCTCTACCCAGCATACTCCTCATACAAGGCTGTCAAAACGAAGAACGTTAAGGAATATCCCGCTCTCTAGCGGCCATGTCCCTTGCTGACGACGCGTCATCTCAACACAGCTCTGACCAATCGGACACAAGGACTGAacactctgatgaagatgtaggaGACAAAGCCCCCAAACGCACTACCAGCGTCAAGGCAACCAAgaaacctgctgctgctgctgctaagaCAGAGATTCAAACCAAGACTGTGAAGAAGCCCACCAAGAAAAAGGCCACGACTAACAATGCAGAGACGCCACCATGAGACCTGCTGTCCACATCCACCGGCCTATACTCTCTTGACCCACAGCCTGCGGGCCCTTCGTCCTCTGTTTAgtctccacacaaacacacatacactgtgtATATTAAGCACTGAAATTGTGTCACTCCTGCTGGTTTTTAGAGAAAAGTGCAGGTTTTGGTTTAGGGAACCCTTAGGTAGGGAACAGTTCTTTTACACAGACTGAGTTGCATATTTTGCCTCACTCTTTACTTACTGTGAGCTAATCACAGATTTAACAGTTGGGTTCATTGTTGGATATTTTTTTGTCCGATAATGGTCAGTGATACATCCATAAATGCTCCTTTTTCCTTTAACCCCTAGACATATACGTCCCTATAGTAGGTGAGAACATAACTGTTTTTGGTTAAAGTATCACCAGTAAAATATCACATTCTTCACTCCTAGTTCTCTAGATAAGGATCCCTTATGTGTCCTCTGAACTACTCCTGCATGGTTCCAGTTGAAAGTAAAAATCACAACCTCTCTGTGTGTACAGGCTACAATTCTGGGTCCTCATCTGGACCTGACCCCGATGgtagaaatccagagagagacagttgGCTTTAAGTTTATTGTgcctgaggttttttttttttttactgaggaATAAGAAGGTAGTTCAAATCAACTTTAAAGCATTGGTTGATAGTTGTAGACATCCATATTACTGTTTCAGACCTAATAGTTCCCACTTTTGACAAATACCACCACTATGTCCTAGCTCATGCAACTGTCTAGTTTTACAGGATGACCTGTGATCAAACCGGTTTTGGTTCTCTATTTTACCTTAGTTTTAACCTCTTTGACTGCATCTTAGGCCTCACAGCTTGTGGAAGAGTTTAGCTTCTCCTCATTTGGTCTATATAGTGAGTCTGGCTCTGCTAAGTCCAGGTCTCACTTTCAGCAACTTACTTCCTCACAGCTTTTAATGTGACTTTCACGTCATGTACAGTACTGGTGATGGAGTGGTTTGCTTAGTGTTGGCTGAGTTATCCTTTACTAAGACTTCACTCTCTTATTTATTATGCTTCTGGTTTAGCCAACTTCTTTTGGTCATATAATGTTAGTAATAGGTATGATCAGTTGTGCAAAGCCAGGCCTCTTAAGGTAATGCTGCAACTCCACAAAACATAAATGCAGTAGTCATTAAAGAGTTTCTGGGGTTTGTGAGGCAACATATCTGCTTTCACCACAGTAGTGATGTCTgtatattgtttgtgtttaacatTAGAAAGTCATGGAGTAGCTCTGCACTTTCTCACTCCTTCTACCCAGCTGTGCGGGGACACTCTGCCTTTTTGGAATGTTTATCTCAGAAGCCAGGATAAAGCATAGCAATATGGAACAAAATTAAACCAACATCAGGAGACTGTGAGGAAGTATTTTCTCAATCCCGTGCTGTTGTTCTAGATGTGGAGGAAGTGTCAGTCCAGACTCGGGTGTTTCTAAACACACTGGACTTTTGTTCTGGGATGGGCTCTTCTGGTTGCCGGCCACTGCATTGGGTGTAGTTTATCCTAGTGCTCTAATGAGAGATTTAAAAGCATGAGACTACATCAACCCTCATTACTGTTGTCTGCAGTGTGACACTATTTTGAACCAGTAGGTGGAGACAAACCCCACCTCAACTGTTGGCATAGTTATTAAACAATATTTAAACAGAATGTAAATAGTAACCTTGACTGAAAATACAGTATGAGCTTGCTTGCCTTATACATTCTGTGGGCTTGAATCCATTGACATTTTTACTCATTTGTGTGCTTTTTTAAAATTCTTAGTTCTGACAAATCCTCTATGTTCTGAAACTGGAAGAACCTCCGACTCCACCAGTGTGGAATTCTGGTGTTAGAAgtgatttttgtattttacagactttaactttttttttctgtccttagtcattcattttaacttttcttTATCACAAAGTAGGGAATCTTCTGACGGagtatattttttgtttgtacatTCACATCCTGCTGTGTACTCTACTCACTGGCGAAAAAATATATTAGGGCCAAAAGTTGAAAATAGACTTTTCTGTCTTTAAATTTAAGAAGACCGCACATAATAGAGACATTTTGTCTTTTACAACCCTGCTATTCTTGTGTTTATGCCATTTTTCTATATTTATTCTTCGTTAAAATCCATATTGTGTACAGGGATGTTCATTTGTTTGTGCCAATTGTCAAAGCTCCATGTCAAAAAGGGTTACAATGTGTGTACTGGGACAATAGTATCTTAAAAAGGTCATATATCAGTAATAAAAACTACCAATAAAGTGTTaaaaaaaaaaaaaa
>TU142254
AGGGGCAGGGCGTGCTGTCGGACAAGCTGCGGAGTTTCAGCATGCAGGACCTGACTCTGATCAACGCTGAGGATGAGCTGGATCTGCACACCTCAGACGCCCGCATGAGACGGGAGCCCAAGGACGATTTGAGCTCAGGATCCAGCACGCTGCCCCGGGCCAAGAGCTCCGCTGCACGGCAGACCCCAGAGTCCCTTTGGGGTCCAGAGTGTTTACAGCAGCAGGCGGCGACCAAAGCGCTCTCTGCTGCTCATGTAGCATCGATGTGAGTGCACTGAAATGGATGCAACGCTGATGACCCTGTCTGAATTTTTATTAACCC
>XM_039813723.1
AGCAGTGTTACAGAGCAGAGCAGCTTGGAGCCAGACTGCAGAAGCACATCCTCAGCTGCTGCGAGCCCACCCAACAGCTCAGCAGGGCGGACAGGCAGCACCGGGCAGCCTCACGGTTCACATCGCATCACACCGCGTCCTAGAGGGGAATGGGGGGCACCCAGCCCGCTAGCTAACTTACTAGATTTCTCTAGAAGCGGTGAAGGCTCACGGCCGGCGCTCCAAAAAGATGGTATCCTGGATGATTTCGAGGATAGTCGTCCTTGCCTTTGGGACGCTCTACCCAGCATACTCCTCATACAAGGCTGTCAAAACGAAGAACGTTAAGGAATATgtgaAGTGGATGATGTACTGGATAGTGTTTGCGTTGTTCTCTACAGCAGAGACAGCCACAGACCTGCTCCTATCATGGTTTCCATTTTACTTTGAGCTGAAGATTGCCTTTGTGATCTGGCTCCTGTCCCCGTACACCAAGGGCTCCAGTGTCCTCTACCGCAAGTTTGTCCACCCAACGCTGTCCAACAAAGAGAAGGAGATAGATGAGTACATTGCGCAGGCCAAAGACAGGAGTTATGAGACCATGATGAAGTTTGGAAAGAGGGGTCTCAACCTGGCTGCTAATGCTGCTGTCACCGCAGCCGCCAAGGGGCAGGGCGTGCTGTCGGACAAGCTGCGGAGTTTCAGCATGCAGGACCTGACTCTGATCAACGCTGAGGATGAGCTGGATCTGCACACCTCAGACGCCCGCATGAGACGGGAGCCCAAGGACGATTTGAGCTCAGGATCCAGCACGCTGCCCCGGGCCAAGAGCTCCGCTGCACGGCAGACCCGCTCTCTAGCGGCCATGTCCCTTGCTGACGACGCGTCATCTCAACACAGCTCTGACCAATCGGACACAAGGACTGAacactctgatgaagatgtaggaGACAAAGCCCCCAAACGCACTACCAGCGTCAAGGCAACCAAgaaacctgctgctgctgctgctaagaCAGAGATTCAAACCAAGACTGTGAAGAAGCCCACCAAGAAAAAGGCCACGACTAACAATGCAGAGACGCCACCATGAGACCTGCTGTCCACATCCACCGGCCTATACTCTCTTGACCCACAGCCTGCGGGCCCTTCGTCCTCTGTTTAgtctccacacaaacacacatacactgtgtATATTAAGCACTGAAATTGTGTCACTCCTGCTGGTTTTTAGAGAAAAGTGCAGGTTTTGGTTTAGGGAACCCTTAGGTAGGGAACAGTTCTTTTACACAGACTGAGTTGCATATTTTGCCTCACTCTTTACTTACTGTGAGCTAATCACAGATTTAACAGTTGGGTTCATTGTTGGATATTTTTTTGTCCGATAATGGTCAGTGATACATCCATAAATGCTCCTTTTTCCTTTAACCCCTAGACATATACGTCCCTATAGTAGGTGAGAACATAACTGTTTTTGGTTAAAGTATCACCAGTAAAATATCACATTCTTCACTCCTAGTTCTCTAGATAAGGATCCCTTATGTGTCCTCTGAACTACTCCTGCATGGTTCCAGTTGAAAGTAAAAATCACAACCTCTCTGTGTGTACAGGCTACAATTCTGGGTCCTCATCTGGACCTGACCCCGATGgtagaaatccagagagagacagttgGCTTTAAGTTTATTGTgcctgaggttttttttttttttactgaggaATAAGAAGGTAGTTCAAATCAACTTTAAAGCATTGGTTGATAGTTGTAGACATCCATATTACTGTTTCAGACCTAATAGTTCCCACTTTTGACAAATACCACCACTATGTCCTAGCTCATGCAACTGTCTAGTTTTACAGGATGACCTGTGATCAAACCGGTTTTGGTTCTCTATTTTACCTTAGTTTTAACCTCTTTGACTGCATCTTAGGCCTCACAGCTTGTGGAAGAGTTTAGCTTCTCCTCATTTGGTCTATATAGTGAGTCTGGCTCTGCTAAGTCCAGGTCTCACTTTCAGCAACTTACTTCCTCACAGCTTTTAATGTGACTTTCACGTCATGTACAGTACTGGTGATGGAGTGGTTTGCTTAGTGTTGGCTGAGTTATCCTTTACTAAGACTTCACTCTCTTATTTATTATGCTTCTGGTTTAGCCAACTTCTTTTGGTCATATAATGTTAGTAATAGGTATGATCAGTTGTGCAAAGCCAGGCCTCTTAAGGTAATGCTGCAACTCCACAAAACATAAATGCAGTAGTCATTAAAGAGTTTCTGGGGTTTGTGAGGCAACATATCTGCTTTCACCACAGTAGTGATGTCTgtatattgtttgtgtttaacatTAGAAAGTCATGGAGTAGCTCTGCACTTTCTCACTCCTTCTACCCAGCTGTGCGGGGACACTCTGCCTTTTTGGAATGTTTATCTCAGAAGCCAGGATAAAGCATAGCAATATGGAACAAAATTAAACCAACATCAGGAGACTGTGAGGAAGTATTTTCTCAATCCCGTGCTGTTGTTCTAGATGTGGAGGAAGTGTCAGTCCAGACTCGGGTGTTTCTAAACACACTGGACTTTTGTTCTGGGATGGGCTCTTCTGGTTGCCGGCCACTGCATTGGGTGTAGTTTATCCTAGTGCTCTAATGAGAGATTTAAAAGCATGAGACTACATCAACCCTCATTACTGTTGTCTGCAGTGTGACACTATTTTGAACCAGTAGGTGGAGACAAACCCCACCTCAACTGTTGGCATAGTTATTAAACAATATTTAAACAGAATGTAAATAGTAACCTTGACTGAAAATACAGTATGAGCTTGCTTGCCTTATACATTCTGTGGGCTTGAATCCATTGACATTTTTACTCATTTGTGTGCTTTTTTAAAATTCTTAGTTCTGACAAATCCTCTATGTTCTGAAACTGGAAGAACCTCCGACTCCACCAGTGTGGAATTCTGGTGTTAGAAgtgatttttgtattttacagactttaactttttttttctgtccttagtcattcattttaacttttcttTATCACAAAGTAGGGAATCTTCTGACGGagtatattttttgtttgtacatTCACATCCTGCTGTGTACTCTACTCACTGGCGAAAAAATATATTAGGGCCAAAAGTTGAAAATAGACTTTTCTGTCTTTAAATTTAAGAAGACCGCACATAATAGAGACATTTTGTCTTTTACAACCCTGCTATTCTTGTGTTTATGCCATTTTTCTATATTTATTCTTCGTTAAAATCCATATTGTGTACAGGGATGTTCATTTGTTTGTGCCAATTGTCAAAGCTCCATGTCAAAAAGGGTTACAATGTGTGTACTGGGACAATAGTATCTTAAAAAGGTCATATATCAGTAATAAAAACTACCAATAAAGTGTTTATGAgtg
>XM_039813724.1
CCAGCAGTGTTACAGAGCAGAGCAGCTTGGAGCCAGACTGCAGAAGCACATCCTCAGCTGCTGCGAGCCCACCCAACAGCTCAGCAGGGCGGACAGGCAGCACCGGGCAGCCTCACGGTTCACATCGCATCACACCGCGTCCTAGAGGGGAATGGGGGGCACCCAGCCCGCTAGCTAACTTACTAGATTTCTCTAGAAGCGGTGAAGGCTCACGGCCGGCGCTCCAAAAAGATGGTATCCTGGATGATTTCGAGGATAGTCGTCCTTGCCTTTGGGACGCTCTACCCAGCATACTCCTCATACAAGGCTGTCAAAACGAAGAACGTTAAGGAATATgtgaAGTGGATGATGTACTGGATAGTGTTTGCGTTGTTCTCTACAGCAGAGACAGCCACAGACCTGCTCCTATCATGGTTTCCATTTTACTTTGAGCTGAAGATTGCCTTTGTGATCTGGCTCCTGTCCCCGTACACCAAGGGCTCCAGTGTCCTCTACCGCAAGTTTGTCCACCCAACGCTGTCCAACAAAGAGAAGGAGATAGATGAGTACATTGCGCAGGCCAAAGACAGGAGTTATGAGACCATGATGAAGTTTGGAAAGAGGGGTCTCAACCTGGCTGCTAATGCTGCTGTCACCGCAGCCGCCAAGGGGCAGGGCGTGCTGTCGGACAAGCTGCGGAGTTTCAGCATGCAGGACCTGACTCTGATCAACGCTGAGGATGAGCTGGATCTGCACACCTCAGACGCCCGCATGAGACGGGAGCCCAAGGACGATTTGAGCTCAGGATCCAGCACGCTGCCCCGGGCCAAGAGCTCCGCTGCACGGCAGACCCGCTCTCTAGCGGCCATGTCCCTTGCTGACGACGCGTCATCTCAACACAGCTCTGACCAATCGGACACAAGGACTGAacactctgatgaagatgtaggaGACAAAGCCCCCAAACGCACTACCAGCGTCAAGGCAACCAAgaaacctgctgctgctgctgctaagaCAGAGCCGGCTCCGGCGAATTTGCATGTTGTGGAGACTTTCTGACCTCTCCAGCGACGCACTTTAGAACTCAGTaatcaacacaaaacacagagatgGTTAAGGTGATATATTGTGTAAGTtttatgtaattaatcacaGGGAAGttacagaggacagaggaaaaaGGAACAAGTCTCACCGGATCAGTTTTCCCCCAGAGCTCCCACAGAACACAAAGAACA

Function

symbol description
reep2 Predicted to enable microtubule binding activity and taste receptor binding activity. Predicted to be involved in endoplasmic reticulum tubular network organization. Predicted to be integral component of membrane. Predicted to be active in cytoplasmic microtubule; endoplasmic reticulum membrane; and endoplasmic reticulum tubular network. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 72. Orthologous to human REEP2 (receptor accessory protein 2).

NR:

description
receptor expression-enhancing protein 2-like

GO: NA

KEGG:

id description
K17338 REEP1_2_3_4; receptor expression-enhancing protein 1/2/3/4

RNA

RNA id representative length rna type GC content exon number start site end site
TU142250 False 2888 lncRNA 0.42 5 18285958 18314401
TU142254 False 322 TUCP 0.58 2 18303269 18305695
XM_039813723.1 True 3387 mRNA 0.44 8 18299320 18314413
XM_039813724.1 False 1220 mRNA 0.53 8 18302253 18314415

Neighbor

gene id symbol gene type direction distance location
egr1 egr1 coding downstream 88543 18193217 ~ 18197415 (-)
LOC120566259 adra1b,LOC104967953 coding downstream 195492 18081204 ~ 18090466 (-)
LOC120567416 LOC104938463,LOC103391208,LOC103359220,LOC100705713,LOC105026079 coding downstream 285129 17995975 ~ 18000829 (-)
fbxl3l NA coding downstream 317178 17959879 ~ 17968780 (-)
sowahab NA coding downstream 414389 17870202 ~ 17871569 (-)
kdm3b kdm3b coding upstream 1398 18315813 ~ 18343775 (-)
spon2a LOC103359201,LOC104954676,LOC104922704 coding upstream 30978 18345393 ~ 18361658 (-)
ctbp1 LOC107375331,LOC102204710,LOC101481404,LOC102780827,LOC100707048,LOC104922705,LOC103359200 coding upstream 52756 18367171 ~ 18382380 (-)
LOC120567275 fam53c coding upstream 68455 18382870 ~ 18389453 (-)
LOC120567277 hnrnpab,LOC103359197 coding upstream 84013 18398428 ~ 18402180 (-)
G105835 NA non-coding downstream 250201 18035382 ~ 18035757 (-)
G105834 c1qtnf2,LOC103471225 non-coding downstream 250710 18033407 ~ 18035248 (-)
G105827 LOC108238064 non-coding downstream 262062 18022437 ~ 18023896 (-)
G105820 NA non-coding downstream 270031 18015451 ~ 18015927 (-)
G105806 atp7a non-coding downstream 305660 17978312 ~ 17980298 (-)
G105967 LOC100708117 non-coding upstream 235695 18550110 ~ 18551684 (-)
G106057 NA non-coding upstream 395627 18710042 ~ 18729032 (-)
G106066 NA non-coding upstream 684125 18998540 ~ 18999875 (-)
G106068 NA non-coding upstream 687357 19001772 ~ 19002114 (-)
G106073 NA non-coding upstream 732849 19047264 ~ 19047863 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other downstream 217466 18067425 ~ 18068492 (-)
sfxn1 sfxn1,LOC103359221,LOC100705454,LOC106517750,LOC103471194 other downstream 290608 17987196 ~ 17995350 (-)
LOC120566288 NA other downstream 426203 17857084 ~ 17859755 (-)
LOC120567448 LOC103359144,LOC108240510,LOC107375047,LOC100701092,LOC102792911,LOC102297680,LOC101469512 other downstream 490567 17783560 ~ 17795391 (-)
kif3a kif3a other downstream 537411 17668084 ~ 17748547 (-)
LOC120566257 NA other upstream 373373 18687788 ~ 18691410 (-)
rgs14b rgs14 other upstream 703337 19017752 ~ 19044951 (-)
LOC120566717 LOC102215832 other upstream 901574 19215989 ~ 19250436 (-)
tomm5 NA other upstream 1121424 19435839 ~ 19436927 (-)
tlr1 LOC104951710,LOC102197886 other upstream 1163515 19477930 ~ 19482625 (-)

Expression


Co-expression Network