G106085


Basic Information

Item Value
gene id G106085
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19072063 ~ 19072742 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142463
ATCCCTCCACAGGGGGTACAGTTCCAGACTGGCTGGCAGAAACTAAGGGATTGACAGCCTTAATTGAGTAAAGTCTGAGTTTGTCTTTCATATATTCTTCATCTGCCCAAGCTTAACCTTTGGACTGCCTTGCTTGTGTGATGCAATTCCTTGTGTGCCATGAGAAAGGTGATTCCCTTCCATGCGTAATTTGTCTTGTGAGCATTTAAAGCTGGCAGCACCCCAGTGGATCATCTTTCAAGAGCCAGCCGAGTTCAAAATAGCCATCGTGCAGCCACACTCCAAGGATGTGCAAGCCAGAGATTAATTTTGAAACTGTGGAAACATGGAGTGGAGCCGAGGGAAGTGATGATAGTGATGGATAGCATGGTTAGGTCATCTGTGGGTCTATTTGAAGATGGGTGGGTCTCAGCACCTGTGCTTCCAACTTGAATAGGATTTAACCTGATTCATTTGGGTGAACAGCAGCAGATGTGGAAAGGCAGATTTACCTGTTGAAGCACCTGTAGTTGGAAGGCTGTAGTCTTTGTGGGAGCTGGGGCAGCTGGGTGTTGAGGGCGTTCAGGAGCTCTGTGTTGTCTCCCAGAGCTTGGCTCCATGGGGAGCTGTAGGATTTGGGGATTATTGTTGTGTTGAACTTCTCATGAGGAATTTCCTTCAGAGGGCCAGAATATCCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142463 True 680 lncRNA 0.48 1 19072063 19072742

Neighbor

gene id symbol gene type direction distance location
LOC120566723 LOC103354395,LOC101073614 coding downstream 3992 19059277 ~ 19068071 (-)
slc34a1b LOC102798292 coding downstream 56724 19002512 ~ 19015339 (-)
simc1 NA coding downstream 120530 18935651 ~ 18951533 (-)
cnot6a cnot6 coding downstream 137624 18915363 ~ 18934439 (-)
LOC120566918 LOC103354394 coding downstream 163768 18706095 ~ 18908295 (-)
rbm22 rbm22,LOC102796909 coding upstream 1240 19073982 ~ 19079321 (-)
slc35a4 slc35a4 coding upstream 70967 19143709 ~ 19145147 (-)
LOC120567311 NA coding upstream 72496 19145238 ~ 19147027 (-)
LOC120567146 csf1r coding upstream 89006 19161748 ~ 19175741 (-)
pdgfrb pdgfrb coding upstream 103505 19176247 ~ 19203101 (-)
G106084 NA non-coding downstream 880 19070848 ~ 19071183 (-)
G106074 LOC103135527,LOC103354384,LOC104927064,LOC106905160,LOC100709097,LOC107094991,LOC102235273,LOC106517448 non-coding downstream 16369 19049374 ~ 19055694 (-)
G106073 NA non-coding downstream 24200 19047264 ~ 19047863 (-)
G106068 NA non-coding downstream 69949 19001772 ~ 19002114 (-)
G106066 NA non-coding downstream 72188 18998540 ~ 18999875 (-)
G106128 NA non-coding upstream 56544 19129286 ~ 19134013 (-)
G106164 NA non-coding upstream 142058 19214800 ~ 19215918 (-)
LOC120566722 NA non-coding upstream 189288 19262030 ~ 19262872 (-)
LOC120566720 NA non-coding upstream 190171 19262913 ~ 19265476 (-)
LOC120566721 LOC102291516,LOC101487913,LOC102195901 non-coding upstream 214334 19287076 ~ 19288469 (-)
rgs14b rgs14 other downstream 27112 19017752 ~ 19044951 (-)
LOC120566257 NA other downstream 380653 18687788 ~ 18691410 (-)
reep2 reep2,LOC102782871 other downstream 757648 18285958 ~ 18314415 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other downstream 1003571 18067425 ~ 18068492 (-)
sfxn1 sfxn1,LOC103359221,LOC100705454,LOC106517750,LOC103471194 other downstream 1076713 17987196 ~ 17995350 (-)
LOC120566717 LOC102215832 other upstream 143247 19215989 ~ 19250436 (-)
tomm5 NA other upstream 363097 19435839 ~ 19436927 (-)
tlr1 LOC104951710,LOC102197886 other upstream 405188 19477930 ~ 19482625 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other upstream 899091 19971833 ~ 19981633 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other upstream 1158166 20230908 ~ 20233924 (-)

Expression


Co-expression Network