G106164


Basic Information

Item Value
gene id G106164
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19214800 ~ 19215918 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142574
TGCAGTCTTAGATAATACATAGTCTAAGCAAATTATATCTCAGGATTGCCtgcaacagtaggctacatgcaGGTTGCTTACTGAGTTAGCAGTAAAAGGAGGAACACCTTCTAAAggtgtttttctatttttctcctTTACTGAAACAAGAGGGGACAATGTAGTGTGAGAAAATTAACTACGTGTCAGATTCTAAGAATGCACTATTTATCTTTTAGCAACATCAGGTATTTTCTATATTTAGTTTGACACGTTTCCTGTCTTAGTCGCTTCCAGTTTTAAAGGTTTCACAACTGAAATATAGATACCTGTAGTAAAACCTTAAACATTGTGATGTTTAATACTTGTAATAACTCAGGGTTTGAGTAATTTTAGGGCTCTGACTTTCAAGTCTGGAGAATAAACTATTCTACATTGTGGATATCTATGCTCCCAGTTTGTGAGTTGAACGCATTGCTGACTTGTTATGTTTCATGATCTAATGTTAACCAGTTAGTCAACTATCTAAAaggtttaaaattaaaaaaacaaacatggccATTTGTCTGGAATTAAATTGAACTACATGCAAACGAGGACCTAAACAGACAATAATGCACAAGAAAATTTAATTTCTTAGGTATTGGCTCTGACCCTACTCTGACTTGGAAATGATCAGTGTATTCTGACCATTAACTAATCTAAATATCCCTGACACTTTGGTTTTCCTGCCTCTTCTCAAAGACCCAATCTTTTCTAACCATTGTGCAGCTGACATGCTCCAGCCTGTAGGAGTAAGTGCTCGACTGCACAAGACGTAATAATAAACGGCGAGGGGAGAAACATATAGTTCAATACTGGAAGGCATCGGCTAGAATAAGGTCACTTGGATTAAGTTAatttaaagtttgtttaaaCCTTTGCTTTTCTGAGTTGACTTCATAACTCTTAGACAGTGGATAATTTGCAAAGCAACCTATAATGGACATTTTGGAGAAATAACTTTTCATATTATCAAAGGTGCTCTTGCATCTGCTACAGTCTTTTGGTACGGACTGGGTCAGGAAGTGAAATGTCAAACCTTTGATCCTCAGGAAGAGCACCCTTCTTGTCTCAGCTCAGAATCTCCCTCTGAAACCC

Function

GO:

id name namespace
GO:0042611 MHC protein complex cellular_component
GO:0042613 MHC class II protein complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142574 True 1119 lncRNA 0.37 1 19214800 19215918

Neighbor

gene id symbol gene type direction distance location
pdgfrb pdgfrb coding downstream 11699 19176247 ~ 19203101 (-)
LOC120567146 csf1r coding downstream 39059 19161748 ~ 19175741 (-)
LOC120567311 NA coding downstream 67773 19145238 ~ 19147027 (-)
slc35a4 slc35a4 coding downstream 69653 19143709 ~ 19145147 (-)
rbm22 rbm22,LOC102796909 coding downstream 135479 19073982 ~ 19079321 (-)
LOC120566716 LOC102215832 coding upstream 61213 19277131 ~ 19282674 (-)
arsia arsi,LOC104927051 coding upstream 85887 19301805 ~ 19305065 (-)
aldob aldob coding upstream 115788 19331706 ~ 19334698 (-)
LOC120567398 NA coding upstream 149902 19365820 ~ 19373983 (-)
LOC120567397 NA coding upstream 160286 19376204 ~ 19384972 (-)
G106128 NA non-coding downstream 80787 19129286 ~ 19134013 (-)
G106085 NA non-coding downstream 142058 19072063 ~ 19072742 (-)
G106084 NA non-coding downstream 143617 19070848 ~ 19071183 (-)
G106074 LOC103135527,LOC103354384,LOC104927064,LOC106905160,LOC100709097,LOC107094991,LOC102235273,LOC106517448 non-coding downstream 159106 19049374 ~ 19055694 (-)
G106073 NA non-coding downstream 166937 19047264 ~ 19047863 (-)
LOC120566722 NA non-coding upstream 46112 19262030 ~ 19262872 (-)
LOC120566720 NA non-coding upstream 46995 19262913 ~ 19265476 (-)
LOC120566721 LOC102291516,LOC101487913,LOC102195901 non-coding upstream 71158 19287076 ~ 19288469 (-)
G106243 NA non-coding upstream 96891 19312809 ~ 19314416 (-)
G106248 NA non-coding upstream 104345 19320263 ~ 19321306 (-)
rgs14b rgs14 other downstream 169849 19017752 ~ 19044951 (-)
LOC120566257 NA other downstream 523390 18687788 ~ 18691410 (-)
reep2 reep2,LOC102782871 other downstream 900385 18285958 ~ 18314415 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other downstream 1146308 18067425 ~ 18068492 (-)
sfxn1 sfxn1,LOC103359221,LOC100705454,LOC106517750,LOC103471194 other downstream 1219450 17987196 ~ 17995350 (-)
LOC120566717 LOC102215832 other upstream 71 19215989 ~ 19250436 (-)
tomm5 NA other upstream 219921 19435839 ~ 19436927 (-)
tlr1 LOC104951710,LOC102197886 other upstream 262012 19477930 ~ 19482625 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other upstream 755915 19971833 ~ 19981633 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other upstream 1014990 20230908 ~ 20233924 (-)

Expression


Co-expression Network