G106248


Basic Information

Item Value
gene id G106248
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19320263 ~ 19321306 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142699
GTGAACTTGGTGCTCTGGCCAGACAGGTAGGTGAGCAGGTAGGGGGTGGCAGGCAGAAAGGCTGGTGCCACGTTGGTGTGGGGAGAATGAGACAGCTCATGAAGACACCGAACAGCCTGCAGACGGCACGTAGCATCTGAGCCGGTGAGGAGACCAACCAGAAGATGCATACTATTCTCCTGCCTATTGATGAAGGTGAGCTGTGCTGATGGGTCGCGGAGAGCTTTACTCAAAGCTTTCAGGTGGGCCTCCCTCTCCGGCCCGCTGTGTTGAAGTTTGTGGAACAAACTGGCCACGTCCTGGGGAAATGAGGAGCAGATTCAGATGGGAACCCAAACATTATCAATCACAACGTCTGTCTCACCTGTTCCCCTGAGTAAGTGTCCATGGTGACCCCTGGCTGGTCCTCATCGTCATTCAGCAGGAGTCTCTTGCTCAcaagctgtctgtctctgcggGCTTGTCTCAGTGCTACGGCATTTAACGTAGAGAAATATTACATCACCTTCAGCAAAGAAGAAAGTCATCTGAGAGTAGCCCATTATACTTAGCTCTTCATTGTAAAGATACCCTACAAGTAGGGTTGGGCGGTATCCAAATTTTGAAACCGTCAAACCTCCTCCCTATTTTACCGCGGTATACGGTATTACCGTGACTAATTAAAAATGATGACTTGTGCACCGTTCAGAAACTGAATACCAATACTAATactgaaacaataataacaaaaaaactactttcTCCTCCACACTGTGATGTGATGACAACCACacataattacataaattatatttaatatttaatccttGCCTCCTATATAAGTGCATTGCATTTGTTTTAATGACGGTATTGAAACTGATACCGTTGctatttttaagaccccgcggtaAACCTATTGCCGATGTAATTTTAACATCATGACTAGACTAGATCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142699 True 936 lncRNA 0.46 2 19320263 19321306

Neighbor

gene id symbol gene type direction distance location
arsia arsi,LOC104927051 coding downstream 15198 19301805 ~ 19305065 (-)
LOC120566716 LOC102215832 coding downstream 37589 19277131 ~ 19282674 (-)
pdgfrb pdgfrb coding downstream 117162 19176247 ~ 19203101 (-)
LOC120567146 csf1r coding downstream 144522 19161748 ~ 19175741 (-)
LOC120567311 NA coding downstream 173236 19145238 ~ 19147027 (-)
aldob aldob coding upstream 10400 19331706 ~ 19334698 (-)
LOC120567398 NA coding upstream 44514 19365820 ~ 19373983 (-)
LOC120567397 NA coding upstream 54898 19376204 ~ 19384972 (-)
si:ch211-203d1.3 ssh3 coding upstream 93362 19414668 ~ 19426862 (-)
LOC120566441 LOC100707887 coding upstream 111010 19432316 ~ 19435195 (-)
G106243 NA non-coding downstream 5847 19312809 ~ 19314416 (-)
LOC120566721 LOC102291516,LOC101487913,LOC102195901 non-coding downstream 31794 19287076 ~ 19288469 (-)
LOC120566720 NA non-coding downstream 54787 19262913 ~ 19265476 (-)
LOC120566722 NA non-coding downstream 57391 19262030 ~ 19262872 (-)
G106164 NA non-coding downstream 104345 19214800 ~ 19215918 (-)
G106259 NA non-coding upstream 19188 19340494 ~ 19450124 (-)
G106276 NA non-coding upstream 73504 19394810 ~ 19395994 (-)
G106303 NA non-coding upstream 155862 19477168 ~ 19557572 (-)
G106349 NA non-coding upstream 535790 19857096 ~ 19857367 (-)
G106378 LOC108242387 non-coding upstream 624349 19945655 ~ 20052690 (-)
LOC120566717 LOC102215832 other downstream 69827 19215989 ~ 19250436 (-)
rgs14b rgs14 other downstream 275312 19017752 ~ 19044951 (-)
LOC120566257 NA other downstream 628853 18687788 ~ 18691410 (-)
reep2 reep2,LOC102782871 other downstream 1005848 18285958 ~ 18314415 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other downstream 1251771 18067425 ~ 18068492 (-)
tomm5 NA other upstream 114533 19435839 ~ 19436927 (-)
tlr1 LOC104951710,LOC102197886 other upstream 156624 19477930 ~ 19482625 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other upstream 650527 19971833 ~ 19981633 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other upstream 909602 20230908 ~ 20233924 (-)
LOC120566885 ppp2r2c other upstream 1754451 21075757 ~ 21110067 (-)

Expression


Co-expression Network