G106276


Basic Information

Item Value
gene id G106276
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19394810 ~ 19395994 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142731
tccCTACTTCTCGTTTTTCAGTTGTGatgaaaaaaaaccccaaaaaactcTTTTATGTGACAGTGAATTTAATATTAGGACATTGTGACTgccatttttcattattttcttacAATGTATAAACTAAGGGCTTTgtagagaaataaaaaatgaaaataatcgttagttgcagcactGTTAATCGCTATCCTAATGATGGCTGGTAAGGTTACAAATAATAccgacatattttttttaagccttctcTCAGTTGTGCCACGTTATCAGGTAACGTTACACCTCGCTATAACTAACGCAGTTTCATACAACAACCCTGCAACTGATCCTACTTTCACGAAGGTTATAATGTCCGGTTTTGCTGAAACCGCTTTAAGAAACGTTCGttcgttcattcattcattcgttTTGGGGCCGGTAGTTTGTGTTGCAGTTGAATATCAATTTCTTATAGTAATTAAACTGCATTAGTTTAAGTTAGGTGTAACATTAATCTAAatctaataaactggcaacagGGTGTAGATCTGCAGCTGCTCCCAGTAGTTTTACCTTTGATATCTACGAGCTGCTCCTCAGACAGGGGTTGTCCGTTCATCGGGTCGGTCCCATTCTCTGCGATGTACTTCTCGATCAGCCTGCGCTCAAACACCTGGCTGGATACCGGGGAGACGCACGGGTGCTCCGGCACCTCGTTGGAGATTGCACAAACCAAAGACATCTTCCCGACGAAGTCCTTATAGTCTCTTCTGAAAGTGAAATTATGCTCGTCCTGTGGTTTGATAGTTATTATCGCTAATGTACACTTAACTTATGTTTTGCTCAAATTTGAAGTAGCACGCTGTCCTTTCATTGCCGCTACAAACGGgtctccttcttcttctacGCTTTCTTCCAGTCTCTCCGAGCGCCAAAGCCTCACATGCGCTCCACTGCCCTCTACTGCCGGAAAGAAACGGTGCTGAAATGATGAGTTGAAAGACCAGATAGACA

Function

NR:

description
PREDICTED: ubiquitin conjugation factor E4 A-like

GO:

id name namespace
GO:0008276 protein methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142731 True 990 lncRNA 0.42 2 19394810 19395994

Neighbor

gene id symbol gene type direction distance location
LOC120567397 NA coding downstream 9838 19376204 ~ 19384972 (-)
LOC120567398 NA coding downstream 20827 19365820 ~ 19373983 (-)
aldob aldob coding downstream 60112 19331706 ~ 19334698 (-)
arsia arsi,LOC104927051 coding downstream 89745 19301805 ~ 19305065 (-)
LOC120566716 LOC102215832 coding downstream 112136 19277131 ~ 19282674 (-)
si:ch211-203d1.3 ssh3 coding upstream 18674 19414668 ~ 19426862 (-)
LOC120566441 LOC100707887 coding upstream 36322 19432316 ~ 19435195 (-)
slc25a51b slc25a51 coding upstream 68477 19464471 ~ 19469408 (-)
LOC120566455 LOC100699740 coding upstream 132428 19528422 ~ 19569097 (-)
dele1 kiaa0141 coding upstream 173541 19569535 ~ 19577846 (-)
G106248 NA non-coding downstream 73504 19320263 ~ 19321306 (-)
G106243 NA non-coding downstream 80394 19312809 ~ 19314416 (-)
LOC120566721 LOC102291516,LOC101487913,LOC102195901 non-coding downstream 106341 19287076 ~ 19288469 (-)
LOC120566720 NA non-coding downstream 129334 19262913 ~ 19265476 (-)
LOC120566722 NA non-coding downstream 131938 19262030 ~ 19262872 (-)
G106303 NA non-coding upstream 81174 19477168 ~ 19557572 (-)
G106349 NA non-coding upstream 461102 19857096 ~ 19857367 (-)
G106378 LOC108242387 non-coding upstream 549661 19945655 ~ 20052690 (-)
G106367 NA non-coding upstream 565960 19961954 ~ 20007579 (-)
G106375 NA non-coding upstream 644103 20040097 ~ 20055141 (-)
LOC120566717 LOC102215832 other downstream 144374 19215989 ~ 19250436 (-)
rgs14b rgs14 other downstream 349859 19017752 ~ 19044951 (-)
LOC120566257 NA other downstream 703400 18687788 ~ 18691410 (-)
reep2 reep2,LOC102782871 other downstream 1080395 18285958 ~ 18314415 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other downstream 1326318 18067425 ~ 18068492 (-)
tomm5 NA other upstream 39845 19435839 ~ 19436927 (-)
tlr1 LOC104951710,LOC102197886 other upstream 81936 19477930 ~ 19482625 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other upstream 575839 19971833 ~ 19981633 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other upstream 834914 20230908 ~ 20233924 (-)
LOC120566885 ppp2r2c other upstream 1679763 21075757 ~ 21110067 (-)

Expression


Co-expression Network