G106375


Basic Information

Item Value
gene id G106375
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 20040097 ~ 20055141 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142882
GTTCTGGTCCACAATGATGATGTGGACCGTCACGTTACTGCTGAGTGGAGGAGAGCCAGAGTCTCTGGCCTCGATGTGGAAAAGAAACTCCTTCTCGATCTCATAGTCAAACGTTTTTAGTGCGTAAAGATTACCGTTCTCTGGATTGATGGAGAACAGCATGGACATGGAGGTGTTGGCTATCTCCTTCTCTAGGATGAAGTAAACTAGGTACTGGTTTTCGTGGAGGTCAGGGTCAAACGCAGTGAGGGAACTGAGCAAGGCCCCAGGTGCGTTATTCTCCATTACGCGTATGGTATAAAATGACTGAGGGAACTGTGGGACATTGTCATTAACATCCAGCAGCTCTAACGTCATAGTTTCATTGTCCGATAAAGGAGGAGAACCTCTGTCTGTCACAGTGAACGTGATGTCATATTCTGGAACCTTCTCACGGTCTAATGGCTCTGACACTACTAATTCATAATAGTTATCTGAGGACTCCCTCAGTTTGAAAGGCATATTATCTGGAATATGAAGATCAACCACTCCATTGTCACCTGAGTCTTTATCACTGACACTAACTACTGCTATCACTGTGTCTAACTCTGTGTTTTCATTGACTGGACTCTGAAATGATTTAATAGATAATTCTGGATGGTTGTCGTTCATGTCTTCAACCAGAATCTTTATAGTACATTGTCCTGATAAACTATTGGCTCCTTTATCAGTAGCTATAACTTCCATATCATAAATCCTGAAATCCTCATAATTTAACAATCCCTTGACAGTAATTTCACCAGTGGAAGGATTCAAACTAAATGTTTCTTGCGTTTTCTCTGACGTATATAGACTATATGAGTACGTTACATCAGAATTTGACCCCTCATCTAAGTCTGTTGCATTGAGATGAACAACGAGGCTTCCTATTGGAAaattttccatttatttttttacactcaAATTAACTTTGTCAAAAGTAGGTGCATTGTCATTTGTGTCCAAAACACGAACAATTACACTTGCAGTGCCCGAACGAGCAGGTGTGCCTCCATCTACAGCTGTGAGTATTAAATTATGAACAGCCTGCTGCTCCCGATCTAAAGTCTTTTTCAAGATCAAATCGGCAAACTTCGACCCATCTCTGCCAGTCTGAACTTCAATATTAAAATGTTCACTTTCAGTCAGATGGTATGTTTTCACTGAATTGCTTCCAACATCCGGATCAACTGCATTGCTGAGAGAGAATCTCTCCCCTTTCGGCGTTGCTTCAGATATATCTAGATGTATGACGTCTCGTCGAAATTGTGGGGCGTTGTCGTTCATATCCAAAATCTCTACTTCTATGTTAAATATTCGTACTGGATTTTCTAGTATTATTTCCAGTTTCAGATAGCAAGACGCTGACGACTTGGTTGTGCAAATATTTTCCCTGTCAATCTTCTCAACAATATACAGCTCACCAGTCTCTTTGTTCACATTCAGGTATTTCTTATTTGCAATGATGTCCAGACGCATCTTCCTCTGATTCAGTGTTTTAACATCCAGGCTGAGATCGGTAGCAAGGTTAGCGACGACTGATCCTTCTTTCATCTCCTCTGGTATTGAATAATGAGTCACTGATGTCGAAATATTGTGAACGAAAGACAAAAGAATAAGAATACCTAACAACACGTACCTTTTGCAAGACTGCATTGTTACAAAGGACCTCATTGTTGTGTGGGTTCACCGCGCTTTAAACGATATAATTTACGTTTCCAGTAATATTGAATTTAGCTGTAAAGCCCTTAATCCCAAACATATTCACGCAGTTTTAATCCAGAAGATTTTTCCGCTCTAAAAGGAAAGCTGCGTTTTTGGAGTGGAGTTTCAGCTCCACGGAGCTCTCCGGTTGTTTCACGAGCTGCCCTGATGACGGCGATTCACTGTCATGGCGTTCATGTACCGTTCTTTCATTGAGAAAACAGCGCCACCTTTATATTTTGTGGTTAACGTGAAg
>TU142883
GTTCTGGTCCACAATGATGATGTGGACCGTCACGTTACTGCTGAGTGGAGGAGAGCCAGAGTCTCTGGCCTCGATGTGGAAAAGAAACTCCTTCTCGATCTCATAGTCAAACGTTTTTAGTGCGTAAAGATTACCGTTCTCTGGATTGATGGAGAACAGCATGGACATGGAGGTGTTGGCTATCTCCTTCTCTAGGATGAAGTAAACTAGGTACTGGTTTTCGTGGAGGTCAGGGTCAAACGCAGTGAGGGAACTGAGCAAGGCCCCAGGTGCGTTATTCTCCATTACGCGTATGGTATAAAATGACTGAGGGAACTGTGGGACATTGTCATTAACATCCAGCAGCTCTAACGTCATAGTTTCATTGTCCGATAAAGGAGGAGAACCTCTGTCTGTCACAGTGAACGTGATGTCATATTCTGGAACCTTCTCACGGTCTAATGGCTCTGACACTACTAATTCATAATAGTTATCTGAGGACTCCCTCAGTTTAAAAGGCATATTATCTGGAATATGAAGATCAACCACTCCATTGTCACCTGAGTCTTTATCACTGACACTAACTACTGCTATCACAGTGTCTATTggttcattttcttttattggactTTGAAATGATTTTATGGATATTTCTGGGTGGTTGTCATTCATATCTGTCACCTGTATTGTCAGTTTACTGTCACGTCAGATAAGGAAGTTAGGCCCCTTATCACTGGCAATAACCTCCATTTCATAAAGCTTTAAATCTTCATAATTTATCATCTCTTTCACTCTGATTTCGCCATTTTCTGGATTCAAGTTAAACATCTGTTGTGGTCTCTCTGATGTATACAAACTATATGAATAAACGATGTCGGAATTTGAGCCTTCATCTAAATCAGTGGCGTTTACTTTTACTACTAGACTGCCAATCGGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142882 True 1978 lncRNA 0.41 3 20040097 20055141
TU142883 False 918 lncRNA 0.42 2 20050812 20055141

Neighbor

gene id symbol gene type direction distance location
LOC120566486 NA coding downstream 288390 19741886 ~ 19751707 (-)
LOC120566528 NA coding downstream 312806 19723502 ~ 19727291 (-)
spock1 spock1,LOC102785053 coding downstream 341328 19598361 ~ 19698769 (-)
dele1 kiaa0141 coding downstream 462251 19569535 ~ 19577846 (-)
LOC120566455 LOC100699740 coding downstream 471000 19528422 ~ 19569097 (-)
LOC120566601 diaph1 coding upstream 530841 20585982 ~ 20699203 (-)
LOC120566290 LOC104961544 coding upstream 646401 20701542 ~ 20703679 (-)
trpc7b trpc7,LOC101475915,LOC100711831,LOC102778756 coding upstream 660686 20715827 ~ 20770031 (-)
dock2 NA coding upstream 759337 20814478 ~ 20834647 (-)
LOC120567463 dock2 coding upstream 817716 20872857 ~ 20924459 (-)
G106367 NA non-coding downstream 32518 19961954 ~ 20007579 (-)
G106349 NA non-coding downstream 182730 19857096 ~ 19857367 (-)
G106303 NA non-coding downstream 482525 19477168 ~ 19557572 (-)
G106259 NA non-coding downstream 589973 19340494 ~ 19450124 (-)
G106276 NA non-coding downstream 644103 19394810 ~ 19395994 (-)
G106414 LOC103375287 non-coding upstream 24905 20080046 ~ 20092084 (-)
G106426 LOC104959913,LOC104952413,LOC102308212,LOC102796308 non-coding upstream 101195 20156336 ~ 20160484 (-)
G106428 NA non-coding upstream 125077 20180218 ~ 20182153 (-)
LOC120567246 NA non-coding upstream 185347 20240488 ~ 20241710 (-)
LOC120567248 NA non-coding upstream 216098 20271239 ~ 20272407 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other downstream 58464 19971833 ~ 19981633 (-)
tlr1 LOC104951710,LOC102197886 other downstream 557472 19477930 ~ 19482625 (-)
tomm5 NA other downstream 603170 19435839 ~ 19436927 (-)
LOC120566717 LOC102215832 other downstream 789661 19215989 ~ 19250436 (-)
rgs14b rgs14 other downstream 995146 19017752 ~ 19044951 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other upstream 175767 20230908 ~ 20233924 (-)
LOC120566885 ppp2r2c other upstream 1020616 21075757 ~ 21110067 (-)
G106728 mif other upstream 1072697 21127838 ~ 21130970 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other upstream 1123711 21178852 ~ 21187653 (-)
G106988 NA other upstream 1735112 21790253 ~ 21790725 (-)

Expression


Co-expression Network