G106414 (LOC103375287)


Basic Information

Item Value
gene id G106414
gene name LOC103375287
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 20080046 ~ 20092084 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142939
AGATGTCCCTCTCCTGTCAGGGAGCACTAGTGTGTTTGCATGGCTGCCCGGGACTATAGTAGATCCTATACTCATTCTGGGTCCTACTAGCATGTACCGTTTGTCTCCAGATCTGTACTGGATGCTGTGACACAGTGTCCCATCATAATTAGTCTcttgtagatatttagaagtatagTCTGTGGTTTTGGAGCACTGCATTGCAATCAGCACGATGATACTGAtgagaaaaagtgttgaaaCGGAGCCCAAAGTTATCATCAGGTAAAAAGTCACATTATTCTCCTCCTCATTCTTTGTTGCACTTTTAACATCAGAAGCAGCAAAAGCCTCTTTGGGCTCCACCACTTTGACAAGCACAGTAGCTGTTGCTGAGAGCGAAACGTTCCCATTGTCTTTCACCAGTATGACCAGTTTATGCTCAGCCTCGTCTGTCTCTGTGAATGAGCGAAGTGTTCTGATCTGTCCTGTATAGCGGTCCAAACCAAAGAGACTGTGGTCAGTAAcgtcctgcagtgaaaacagTAACCAGCCGTTATATCCTATATCAGCGTCATAGGCTCTGACTTTAGTCACCAAGTGTCCTGCGTTCACATTGCGGGGAATCTCCTCCACACCTTCAGCAGAACCGTTAGAGCTGACTGGATACAGGATGACTGGAGCGTTGTCGTTCTGATCCAGAATGAACACGTTCACTGTGACGTTGCTGCTTAGTGACGGAGTTCCAGAATCTGTGGCAACAACTTGGAACTGGAACGTTTTCAGAGTTTCAAAATCAAAACTCTTTAGTGCTGAAATGTGTCCATTATCAGAATTTACATTTAGGAAAGacattatgtcattttgacTCCCTCCTCTCACTATATGGTATGAAATAGCTGCATTGTCATTCAAATCATTGTCTGTTGCGCttacagaaaaaataaaatttccGGGAACATTATTTTCTACCAGATAAAACTGTAAGGGGGTTTGGTCGAAATGTGGACTGTTGTCATTTACGTCTGATATCTGGATGTTGAGAGTTTTAACAGTAGATAAGGGAGGTTCACCACAATCGGTGgcttttattgttatttcatAATGTGACACCTCCTCTCGATCCAAAAATCCCTTCGTGACAACTGAGTACGTGTTCTCCTTATAGGAGGGCTTTAATTCAAAAGGCACGTCATTCGATATGTATGAAATAATTTTTCCATTGATACCGGAGTCTTTATCTGTCACACTAAGTAGTGAAATAACTGTGCCAGGTTTTGAGTCTTCAGACACTGTATTTGACAGTGATGTCACTTCTATTTCCGGTGGATTATCATTAACGTCTTTTATCTTTATAATGACTCTACACTCACCGGTCAGTGGAGGTGTTCCTTTATCGGATGCCTCAACATCCAGTTTATAAACGTCGTTTTCTTCATAGTCCACTGCTCCTTTAACTCTAATCTCTCCGGTTAATTTGTCCAATTCAAAAATGTCATAGACTTTTTTCTTCAGAGTTTTTCCGAGGCTGTATTCAATTTCGCTATTGGTGCCTTCATCGGGATCTGTCGCATT

Function

NR:

description
PREDICTED: protocadherin alpha-8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142939 True 1554 lncRNA 0.42 3 20080046 20092084

Neighbor

gene id symbol gene type direction distance location
LOC120566486 NA coding downstream 328339 19741886 ~ 19751707 (-)
LOC120566528 NA coding downstream 352755 19723502 ~ 19727291 (-)
spock1 spock1,LOC102785053 coding downstream 381277 19598361 ~ 19698769 (-)
dele1 kiaa0141 coding downstream 502200 19569535 ~ 19577846 (-)
LOC120566455 LOC100699740 coding downstream 510949 19528422 ~ 19569097 (-)
LOC120566601 diaph1 coding upstream 493898 20585982 ~ 20699203 (-)
LOC120566290 LOC104961544 coding upstream 609458 20701542 ~ 20703679 (-)
trpc7b trpc7,LOC101475915,LOC100711831,LOC102778756 coding upstream 623743 20715827 ~ 20770031 (-)
dock2 NA coding upstream 722394 20814478 ~ 20834647 (-)
LOC120567463 dock2 coding upstream 780773 20872857 ~ 20924459 (-)
G106375 NA non-coding downstream 24905 20040097 ~ 20055141 (-)
G106378 LOC108242387 non-coding downstream 27356 19945655 ~ 20052690 (-)
G106367 NA non-coding downstream 72467 19961954 ~ 20007579 (-)
G106349 NA non-coding downstream 222679 19857096 ~ 19857367 (-)
G106303 NA non-coding downstream 522474 19477168 ~ 19557572 (-)
G106426 LOC104959913,LOC104952413,LOC102308212,LOC102796308 non-coding upstream 64252 20156336 ~ 20160484 (-)
G106428 NA non-coding upstream 88134 20180218 ~ 20182153 (-)
LOC120567246 NA non-coding upstream 148404 20240488 ~ 20241710 (-)
LOC120567248 NA non-coding upstream 179155 20271239 ~ 20272407 (-)
LOC120567247 NA non-coding upstream 201068 20293152 ~ 20296043 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other downstream 98413 19971833 ~ 19981633 (-)
tlr1 LOC104951710,LOC102197886 other downstream 597421 19477930 ~ 19482625 (-)
tomm5 NA other downstream 643119 19435839 ~ 19436927 (-)
LOC120566717 LOC102215832 other downstream 829610 19215989 ~ 19250436 (-)
rgs14b rgs14 other downstream 1035095 19017752 ~ 19044951 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other upstream 138824 20230908 ~ 20233924 (-)
LOC120566885 ppp2r2c other upstream 983673 21075757 ~ 21110067 (-)
G106728 mif other upstream 1035754 21127838 ~ 21130970 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other upstream 1086768 21178852 ~ 21187653 (-)
G106988 NA other upstream 1698169 21790253 ~ 21790725 (-)

Expression


Co-expression Network