G106428


Basic Information

Item Value
gene id G106428
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 20180218 ~ 20182153 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142953
ctcacttgcaaagtttctgctctcggatttctcctgcgcgcttggattttttgtgtgttataaccctatcaaaagtcaacaaccaatagaatgccagctgtagtgttgaccaatgaaatgatcccaaccctgttgagggtgcgttcactttactttagaacgtctgttgagggcggctgcactgtaacctgactgtaaccaagtttatatatccccgcgccgtttatagctttattataagtatatgtcaacaatgtgcacagaatggtcgacgcactttcacctgcacccgtcaggaaacgggagaaagctttgaagtgggacgtatgaagttatgtccacaactacgagggtgtgacttaagtacccgttgagctgcatcacagctgcactatgtgcatggacctgtgccagtcagaacatcactcacctgtgtgcagaggacaggcagcagtagcacaaaccaagaagggtgcacaaccaggcctgggagagaaaattactgatgtccacaaaaccaaatcagagaaggagcatactatacaaagacaacagtggagagttcctggatcggtctgtcctcaaagtgccagagatctacaaggacttcacccttttctgcaccatcagcgtataatcaaagtgataaaagagagaacaaattattgttttctctgttgacatgaataggtgcctgtaatgtctgtccat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142953 True 711 lncRNA 0.45 4 20180218 20182153

Neighbor

gene id symbol gene type direction distance location
LOC120566486 NA coding downstream 428511 19741886 ~ 19751707 (-)
LOC120566528 NA coding downstream 452927 19723502 ~ 19727291 (-)
spock1 spock1,LOC102785053 coding downstream 481449 19598361 ~ 19698769 (-)
dele1 kiaa0141 coding downstream 602372 19569535 ~ 19577846 (-)
LOC120566455 LOC100699740 coding downstream 611121 19528422 ~ 19569097 (-)
LOC120566601 diaph1 coding upstream 403829 20585982 ~ 20699203 (-)
LOC120566290 LOC104961544 coding upstream 519389 20701542 ~ 20703679 (-)
trpc7b trpc7,LOC101475915,LOC100711831,LOC102778756 coding upstream 533674 20715827 ~ 20770031 (-)
dock2 NA coding upstream 632325 20814478 ~ 20834647 (-)
LOC120567463 dock2 coding upstream 690704 20872857 ~ 20924459 (-)
G106426 LOC104959913,LOC104952413,LOC102308212,LOC102796308 non-coding downstream 19734 20156336 ~ 20160484 (-)
G106414 LOC103375287 non-coding downstream 88134 20080046 ~ 20092084 (-)
G106375 NA non-coding downstream 125077 20040097 ~ 20055141 (-)
G106378 LOC108242387 non-coding downstream 127528 19945655 ~ 20052690 (-)
G106367 NA non-coding downstream 172639 19961954 ~ 20007579 (-)
LOC120567246 NA non-coding upstream 58335 20240488 ~ 20241710 (-)
LOC120567248 NA non-coding upstream 89086 20271239 ~ 20272407 (-)
LOC120567247 NA non-coding upstream 110999 20293152 ~ 20296043 (-)
G106512 NA non-coding upstream 154212 20336365 ~ 20342662 (-)
G106520 LOC102792811 non-coding upstream 217184 20399337 ~ 20399613 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other downstream 198585 19971833 ~ 19981633 (-)
tlr1 LOC104951710,LOC102197886 other downstream 697593 19477930 ~ 19482625 (-)
tomm5 NA other downstream 743291 19435839 ~ 19436927 (-)
LOC120566717 LOC102215832 other downstream 929782 19215989 ~ 19250436 (-)
rgs14b rgs14 other downstream 1135267 19017752 ~ 19044951 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other upstream 48755 20230908 ~ 20233924 (-)
LOC120566885 ppp2r2c other upstream 893604 21075757 ~ 21110067 (-)
G106728 mif other upstream 945685 21127838 ~ 21130970 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other upstream 996699 21178852 ~ 21187653 (-)
G106988 NA other upstream 1608100 21790253 ~ 21790725 (-)

Expression


Co-expression Network