G106465 (LOC104955902)


Basic Information

Item Value
gene id G106465
gene name LOC104955902
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 20351721 ~ 20352167 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU143018
CTCTCTGCCACCTGTTCCATGTATTTACTTATTTCTGATAACTTGGCTGAGGTGCCGGAACTGAAGGATATTTCATATGATGAGAAGAACTCCAAACTGACCTCTTACCTGATCATCGCGCTGGTGTCTGTGTCCACCTTTTTTCTGACCTTCATTATCATCATCCTGGGTGTGAGGTTTTGTCGCAGTAGAAAGCCCAGACTGTTGTTTGATGGAGCGGTTGCCATCCCCAGCGCTTATCTCCCTCCTAATTACGCAGATGTTGACGGCACAGGAACTTTACGCAGCGCTTACAATTATGACGCCTACCTGACAACAGGTTCTAGAACCAGTGACTTTAAGTTTGTGACGTCTTACAATGACAACACACTGCCTGCTGACCAGACTCTGAGGAAAAGTCCATCAGACTTTGCTGAAGTGTTTGGAGATTGTGATGTCTCTCCTGAG

Function

NR:

description
PREDICTED: protocadherin gamma-A11-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143018 True 447 TUCP 0.46 1 20351721 20352167

Neighbor

gene id symbol gene type direction distance location
LOC120567352 NA coding upstream 13434 20335723 ~ 20338287 (+)
LOC120567211 NA coding upstream 72422 20276737 ~ 20279299 (+)
LOC120567189 LOC101076589,LOC107376492,LOC103375150,LOC102305013,LOC101074748,LOC101075026,LOC107989589,LOC106514196,LOC107373859,LOC102308212,LOC106604881,LOC106604828,LOC103390873,LOC101161607,LOC102780923,LOC101465246,LOC101074087,LOC104937910,LOC103366336,LOC104959671 coding upstream 95308 20103023 ~ 20256413 (+)
LOC120567219 LOC104952413,LOC106456187,LOC105416208,LOC101076589,LOC106956704 coding upstream 148635 20200583 ~ 20203086 (+)
LOC120567347 LOC102308212,LOC107395890 coding upstream 162005 20186609 ~ 20189716 (+)
LOC120567209 LOC104943259,LOC103373949,LOC102209292,LOC102779498 coding downstream 33511 20385678 ~ 20389057 (+)
LOC120567196 LOC102208358,LOC101080210,LOC101061082,LOC105417360 coding downstream 43353 20395520 ~ 20398540 (+)
LOC120567207 LOC101080210,LOC106516811,LOC107396860 coding downstream 46543 20398710 ~ 20401503 (+)
LOC120567205 NA coding downstream 50236 20402403 ~ 20405468 (+)
LOC120567198 NA coding downstream 55395 20407562 ~ 20430473 (+)
LOC120567249 NA non-coding upstream 75810 20273833 ~ 20275911 (+)
LOC120567444 NA non-coding upstream 352920 19973785 ~ 19998801 (+)
LOC120566743 NA non-coding upstream 396758 19950757 ~ 19954963 (+)
G106351 NA non-coding upstream 410006 19940938 ~ 19941715 (+)
LOC120566488 NA non-coding upstream 503443 19844839 ~ 19848278 (+)
G106577 NA non-coding downstream 358342 20710509 ~ 20731673 (+)
G106679 NA non-coding downstream 748317 21100484 ~ 21100835 (+)
G106684 NA non-coding downstream 755331 21107498 ~ 21108359 (+)
G106707 NA non-coding downstream 840899 21193066 ~ 21194849 (+)
G106708 NA non-coding downstream 844012 21196179 ~ 21196654 (+)
LOC120566323 LOC102781894,LOC101481808 other upstream 290383 20028863 ~ 20061338 (+)
G106237 spock1 other upstream 699247 19604840 ~ 19652474 (+)
adra2db LOC102798575,LOC100708556,LOC101479598,LOC102300678 other upstream 1381775 18963934 ~ 18969946 (+)
gabra6a gabra6,LOC102779400,LOC100710435,LOC102294139 other upstream 2451990 17890170 ~ 17899731 (+)
G105677 NA other upstream 2666022 17682919 ~ 17685699 (+)
hrh2a LOC103354784,LOC104948895 other downstream 582562 20934729 ~ 20947415 (+)
selenoh selenoh other downstream 927520 21279687 ~ 21283229 (+)
zdhhc5b zdhhc5 other downstream 937364 21289531 ~ 21350978 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other downstream 1096633 21448800 ~ 21468827 (+)
G107163 LOC103356264 other downstream 2510023 22862190 ~ 22865676 (+)

Expression


Co-expression Network