G106712 (LOC103354767)


Basic Information

Item Value
gene id G106712
gene name LOC103354767
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 21204689 ~ 21205376 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU143312
GCGGTCTCCCACTCCAGATGGCGTGGTTTGcagctctcctctcctccattgCTCCCACGCTCCCAGCCGGAGTGAGGAACAACCACCTCGTCAACTAGGGCGTGCAGGGCGTGGTCCACAATCTCCATCTTTACGGAGTCATGGGATGAGAGGTTCCACAAGGTGCCTGTGATAGTGTCAGTGAGGTCCTGGTCGTGGGTTTTTCTCAGTAACCTAACCAGAGCAGGCACTCCATCGCAGTTCTTGATGGCAATCTTGTTTTCTTGGTCTCGCCCATATGAAATGTTCTTCAGTGCTCCGCAGGCCGAGTGGTGCACATCCTTGCTGGGGTGGTCCAGCAGTGACACCAAGGATGGGATGCCTTTCAGGCGACGCACCTCCGACTTAACCTAGACACA

Function

NR:

description
PREDICTED: catenin delta-1-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143312 True 398 lncRNA 0.56 2 21204689 21205376

Neighbor

gene id symbol gene type direction distance location
LOC120566636 LOC104961169,LOC103354768,LOC101069382 coding upstream 22139 21179991 ~ 21182550 (+)
cabp2b cabp2,LOC103354773,LOC101063225,LOC104961167,LOC100691085,LOC101481420,LOC107101015,LOC105932663,LOC106516609,LOC102297131 coding upstream 30918 21158895 ~ 21173771 (+)
LOC120566628 LOC104961166,LOC103390920,LOC102076832,LOC103354772 coding upstream 49861 21146681 ~ 21154828 (+)
si:dkeyp-121d2.7 LOC103354771 coding upstream 68242 21132215 ~ 21136447 (+)
LOC120567251 NA coding upstream 136969 21060005 ~ 21067720 (+)
slc43a3b slc43a3 coding downstream 37078 21242454 ~ 21259046 (+)
rtn4rl2b LOC104945075,LOC103358608 coding downstream 59616 21264992 ~ 21271131 (+)
clp1 clp1,LOC102795812 coding downstream 78642 21284018 ~ 21287806 (+)
si:dkey-6i22.5 NA coding downstream 102716 21308092 ~ 21310959 (+)
med19a med19 coding downstream 105661 21311037 ~ 21314140 (+)
G106709 ctnnd1 non-coding upstream 2519 21196804 ~ 21202170 (+)
G106708 NA non-coding upstream 8035 21196179 ~ 21196654 (+)
G106707 NA non-coding upstream 9840 21193066 ~ 21194849 (+)
G106684 NA non-coding upstream 96330 21107498 ~ 21108359 (+)
G106679 NA non-coding upstream 103854 21100484 ~ 21100835 (+)
G106851 NA non-coding downstream 241506 21446882 ~ 21447096 (+)
G106972 NA non-coding downstream 555622 21760998 ~ 21761444 (+)
G106975 NA non-coding downstream 557991 21763367 ~ 21763641 (+)
G106992 NA non-coding downstream 638286 21843662 ~ 21843950 (+)
G107025 LOC104954424,LOC103390732 non-coding downstream 1125636 22331012 ~ 22378340 (+)
hrh2a LOC103354784,LOC104948895 other upstream 257274 20934729 ~ 20947415 (+)
G106465 LOC104955902 other upstream 852522 20351721 ~ 20352167 (+)
LOC120566323 LOC102781894,LOC101481808 other upstream 1143351 20028863 ~ 20061338 (+)
G106237 spock1 other upstream 1552215 19604840 ~ 19652474 (+)
adra2db LOC102798575,LOC100708556,LOC101479598,LOC102300678 other upstream 2234743 18963934 ~ 18969946 (+)
selenoh selenoh other downstream 74311 21279687 ~ 21283229 (+)
zdhhc5b zdhhc5 other downstream 84155 21289531 ~ 21350978 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other downstream 243424 21448800 ~ 21468827 (+)
G107163 LOC103356264 other downstream 1656814 22862190 ~ 22865676 (+)
ubxn1 ubxn1,LOC103374193 other downstream 1698379 22903755 ~ 22909562 (+)

Expression


Co-expression Network