G106972


Basic Information

Item Value
gene id G106972
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 21760998 ~ 21761444 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU143754
GGACGTTCGatgcctgttgtgcagcagcagaacatctcccagctgcccggaattatctccccttcacttttcagtaatcttaactttttgttttggtgcttaacccaccttttgtcgggttaatttagctaaccgtaaagaccgctaaacgcgaaggggggagaaattcggcagggaggagattttcggcacatacaccggtagcgctacggagatgtagctaacgctatggatggccgctgttgtgactcggtgctgggtctgatatggtccaTTTCCCGACATTTAATTAACACTAGAAGTGCCGGAATTTCATAACTACTAGAACTGCCGTGAGCGGTCATTTTGACCACCAGATTCCAAACTCTATAATCTCTCATGATAAATACCTAATTGTGATACTGTATTATGTATTGTGTTAGGATATCTTTAGAAAAACGTAATaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143754 True 447 lncRNA 0.44 1 21760998 21761444

Neighbor

gene id symbol gene type direction distance location
ahnak NA coding upstream 777 21724428 ~ 21760221 (+)
eef1g eef1g coding upstream 49523 21701403 ~ 21711475 (+)
polr2g polr2gl,rpb7,POLR2G,polr2g,LOC106604162 coding upstream 59691 21698086 ~ 21701307 (+)
LOC120566253 LOC108261232 coding upstream 78936 21678714 ~ 21682062 (+)
LOC120566695 LOC103358586,LOC106920854,LOC103471386,LOC103147504,LOC106946609 coding upstream 88138 21629753 ~ 21672860 (+)
klhl4 klhl4,LOC103356419,LOC102308013 coding downstream 10278 21771722 ~ 21799995 (+)
mid2 mid2,LOC101473971,LOC102306025 coding downstream 673834 22435278 ~ 22603271 (+)
pmt LOC106930518,LOC102210468 coding downstream 888574 22650018 ~ 22660250 (+)
zgc:152774 NA coding downstream 903446 22664890 ~ 22684172 (+)
f8 LOC104960537 coding downstream 923842 22685286 ~ 22705021 (+)
G106851 NA non-coding upstream 313902 21446882 ~ 21447096 (+)
G106712 LOC103354767 non-coding upstream 555622 21204689 ~ 21205376 (+)
G106709 ctnnd1 non-coding upstream 558828 21196804 ~ 21202170 (+)
G106708 NA non-coding upstream 564344 21196179 ~ 21196654 (+)
G106707 NA non-coding upstream 566149 21193066 ~ 21194849 (+)
G106975 NA non-coding downstream 1923 21763367 ~ 21763641 (+)
G106992 NA non-coding downstream 82218 21843662 ~ 21843950 (+)
G107025 LOC104954424,LOC103390732 non-coding downstream 569568 22331012 ~ 22378340 (+)
LOC120566464 NA non-coding downstream 628909 22390353 ~ 22397051 (+)
G107050 NA non-coding downstream 653558 22415002 ~ 22415335 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other upstream 292171 21448800 ~ 21468827 (+)
zdhhc5b zdhhc5 other upstream 410020 21289531 ~ 21350978 (+)
selenoh selenoh other upstream 477769 21279687 ~ 21283229 (+)
hrh2a LOC103354784,LOC104948895 other upstream 813583 20934729 ~ 20947415 (+)
G106465 LOC104955902 other upstream 1408831 20351721 ~ 20352167 (+)
G107163 LOC103356264 other downstream 1100746 22862190 ~ 22865676 (+)
ubxn1 ubxn1,LOC103374193 other downstream 1142311 22903755 ~ 22909562 (+)
rom1b rom1,LOC102779683 other downstream 1189151 22950595 ~ 22997038 (+)
G107168 NA other downstream 1193528 22954972 ~ 22973761 (+)
flrt1b LOC103374305,LOC102200053 other downstream 1338581 23100025 ~ 23132685 (+)

Expression


Co-expression Network