G107072 (mid2)


Basic Information

Item Value
gene id G107072
gene name mid2
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 22601140 ~ 22605668 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU143869
TATGATATACATTCCTCTCTGGCTAAAATTATCTCTCATATCTACGGAAACAGAAAGCCTTGCATGAATGCAACGCAGCTCTTTTGTGCTGTTTATCAAGGTACAAATGCCAAAATGAGAGGAGCATTTCTCATGAGttgtaaaaaataatttcccaagttacacaaacagaaaagcaAAAAAGGAGAGTCTATTGCATTGTCTCTAGGGTATTACACTGCACTACAAGGAGTGGGTAGCTATTGAAAATCATTCACTGTATATATTCTACTGTATTGACTTGtgacacaaagaaagaaagagcacTGCAAACTGTTTGATATGCATGGCAATATCTACGTGTTCATGGTTcctttttttgcaaaaaaaagagGATATGCTTGACTCAAGATAAGAAACCGCATCATAAAGATAAGGAAAGAATTATGAACCTGTAGCAAGGTCACGTAATCATGCAGTGACCCAGCCAAGCACGCTTGCACAGATGAGTTGAGCTTGTCAGTCTGGATCACAAATCAACACATGGCCGTTTCGAGCCTGTGACCGACATTATTCAACAAGATGGGTGGATATCTGGAAGTCAGGAAACATTCATTAATCTCCCTGACAGAAAAAACATAACCCTCCCCCCTTATACTGGAGCGCCTCCTGCGTTGTCTTTGACCAGTGGATTATCTCTGTTGCCTGTAGCGCTCATGCAATCAATACCTCCATCACACAATCATGACTGACGCATCACCACACAGTTGCACTAAGTAAACACTGCAGGTTGAAAGGTGCACTGGGAGGTCATCACATGTCATATTTTCACTACCTTTCCATAGCTGAGAGTTTATCACTGAAACTTTGCTTTAATTCATGATTAAGTAACCAAGTTACTAGCAAATGATTGAAATCAGTTTGCCTGTATTTTTTATGTCAAGGAAATCATATCTTGTCAATACAAATGTTACATGACATTCAACATTATAAGTACATACCTGGTGATGTGTTAAGAGATTGAAAATGGCCATGAGGTGACAAATCTAACAAGACGGTATGTAAAACATCAGCTTTTTTATCACAATCCCTCCCTACTGCTTCCTGCTACACACTCTCTTAAATCTGCATAAACTATGATACACATTTGATTGTCTGAATCAGAGCCGCTACCTGAATATCAAACCAGAGAGAAACTGTCACTGTCACCCACACCAGGCCTTCAAATCCAAATAAAAAGCAAATAATGGATCCGGCTACAGCTGCTATGTGAATAGTGATGGGTGACAAACAGAGGTCAGGTCTGTTGTAAGCGAAGGTGAGTCAGTATTTGATGAAAAACAAGATTTAGTGAACTTGAAAAAGCTACTTAAAATACCCAGTAAACTGGTGTGGGATCCTACAATGTTTCATGCATTTATCATGACAAGGCCAACTTAAACGAAACATGACgtgtgttggtttgtgtgtatatgtgcctgtgtgtgtgtgtgtgtgtgttaacaaatcacagagaaaaacacaatCATGCCATGACATTGCGACAGACAGCAAGTTAAAGTGTTAAGCCCCTCCTTCTCTGAATAGTCGACAACAgagcaaagtttttttttttaaacttctatTAGTTTATCATAATTTCATCATGATAAAAATCGCATAAACATCATCATAATCGTATCCCTTTTCTAAACAAGATAAAGTTACTAGGTGCTGTTGAAAAGAGCCATGGGGAGGGAAAGTCACTTGTGTTCAAAGCACAGTGCAAAAACCTTTTAACTTTACAGCAGGGGCTTCTGTTTCATTACACTAGATTAGGTGTtagcacattttttttaaactacagtgtTTTATTGCAATACTTTATTATGGTTAATATCCTGTAACCATTATTAATTTTAGACTATAAATCAATTTTGAAAtatgcaacacattctcacacccaactcgtaaaataaggacgttcggtcaggagcctttctcgttcttattgacgttaaaagtctcctttagcgtctcatgtaaacgtgcttggtcgccactattgccgtcccttttgacgtgcttggtcgggatggttgggtttaggaaagggtcgtgggtgggcgtatggttctgtgacacgcgggaggaaagaaaaaagcgacTCTATAAAGCGACTCCAGCAAGgtggggaggacgcctcacacgccgggagacggccgcgggtgaagcgcgacaatgacggaatcgcggaggttgggtttaggagaaaaacaacggggaaaggacgcctcaaaagccgggaaacacacgccggagacgggggaaacaaaacgccacacgcgggacgcgaacccgggaaggacgcctcaaaagccgagAAACACACggcggagacggggaaacaaaacgccacacgcgggacgcgaacccgagtctcctgagtgaaagtccggtgtttcaCCCATCCACCACAACCAACCTCCTCATGCAACAATTTctccttacataccactcgctaaatctcatccaactgcggctctccccagtacgttacacaaatacgccgaagggtgcctttttcgtcgcatcagacgctgaaggccactgaccaaacgtacttattttacgagtttggaatgagaacgggttgaaatATAAGTAGGAAAATAAGGTGATGTATATTTTTCAGAGGAGGCTTTCACAGCCAGCAGTAGTGCTAGTTGTCACTTTGCCTCCCCATTACATCCCTGCCTCTCAGCTCCATCTACTTTAATACTCATAGAGGGGAAATAGTGTTAATCAAAAAGTGCATCATGAATATGTTGAGattaataataaaagtaaaCGATCTTTTTTGTCATAAATAACACTTTTTTCCTATAATATTCAATAAACCTCTTATTATACAAGTCGAGTAGTCACATGAACATCTTGTTCATATCTGGGAGCAAAGTTAACACTTCCTGATACTCGGAAGCTACAACCAGCCAACACAAACAGGACCGCTGTGTCAAAACTAGCAGGAAGATCAAGGAAAAGACTTTAGCAACGACCACTTACAGCTACTGAGGCTACAACACATGAACAGTGATGTGAAGCAATACAAAATGTCCACAGCTAGCATGTATTTGCGTTAGCAAGATGGTAGCATGTAGTTCACACATTAAAGTGGATTCAAAGAAGGCACATCCTCATTTAAAGGAAGATATGTTTTGGGACACATGCTTATTCCCTTTCTTGTCAAGAGTTAGATTAGAAGAATATTTGCACGCTAATAAAGCTAGCAGTTAGCTTAGTTTATAAGAAAGGCGGGAAACACAGGGAAACTGCTAGTCTGGCTCAGTCCAAAGGTAAAAAACCATTGTACACAtaatatctcatttgtttactGAGAAATGTAAAATCGACACTAGTTTTACAGGAAGTTATGTGCTGGAACTAGACTGGAGGCCgcccagtctttatgctatgcTAAACTAACCTGGCTGCTGGCTCTAGCTTCATGTAcaaatatgagagtggtattgatcttctcatatAACTCTTGCCAAGAAAACAGATAACTGACATATCAGTTAAAATGTCTGCAGTCTTCATTGGATTTTTGGATctgcattgttttgttttttaatctacCACAGCTGAGAAGTAATCTCACTGTTCAAATGTTGTAACTTCAAACTCTAAATGGAAGATGAGAATATTCCTTCCTTGGTCTTCAGCCTAGGGTCAATTCAGGAGGAAGATAAATCAAAAAGGAAGACCTTAAATGGTCATTAAAACCAGATGCCCAGCCCTGCCCTGAGTGACGCTAGGACATCAGATGATTTTAGGTCTACTGATGTTTGTGGTCAAGAGACCTTGTTCCCACTGATGGATTAGCAAAGCATTGGATCGCTACAAACTAACAGGACTGACATTTTTCCAGACTGGTGTGCATATCTTCAACACTTTCTAAATCCATAAGAAAGTAACTGGTCCTCGCTAAATGCAGAGAATAGAACTCAGTCGCACTGTCAACGTCTTTCAGCTCCCAATCAACCAGTCACCGGGCCCTTGGTGGGCCTTTTCTCAGTGGCAGGTCTTCATCCCGGTCAAGTATGGAGACTCTTGTCGGCACAGGCCcatctgctgctgttgctgctctTGAAGATCTGaggccaaaccatcaacaaAGTCGGGGACGGGTAGCCCTGAGAGTATCATGACTGACTTGTTCCAGATCATGAAAGTGGGTACAACGGGCAGGAGGAAGGAGATTTCAAAGGTGTGAATGTGCTGGGAGTTCATGGCATCATAGAAGGACAGTGAATTGTTGTCGTAGTCCAGCAGGACACCCAGCCGCCTCAGCTGCAGGCTTGCCTCCACCAGCATCTCCTTGCCGTCATGGCGCACCATAAAGTTGTTGTTGCAGCGCGAGAACACCCATGAGGATGAGTTCTTGCCACTCCATTCATTTTTCGGGGCTGATTTGTAAGCAACGCCGAT

Function

symbol description
mid2 Predicted to enable zinc ion binding activity. Predicted to be located in cytoplasm and microtubule. Is expressed in brain; female organism; ovary; and testis. Human ortholog(s) of this gene implicated in non-syndromic X-linked intellectual disability 101. Orthologous to human MID2 (midline 2).

NR:

description
PREDICTED: probable E3 ubiquitin-protein ligase MID2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143869 True 4452 lncRNA 0.42 2 22601140 22605668

Neighbor

gene id symbol gene type direction distance location
tsc22d3 LOC103390732,LOC104954424,LOC101161414,LOC103356417,LOC102306956,LOC102786303 coding downstream 192929 22375266 ~ 22408211 (-)
pcdh11 LOC104946172,LOC103356418,LOC101473199 coding downstream 585387 21884772 ~ 22015753 (-)
si:ch211-175m2.5 LOC104942593,LOC103358585,LOC101471829 coding downstream 904057 21692687 ~ 21697083 (-)
LOC120566697 NA coding downstream 979532 21619863 ~ 21621608 (-)
LOC120566537 LOC104958700,LOC103358614 coding downstream 1091137 21507069 ~ 21510003 (-)
slc16a2 slc16a2 coding upstream 113226 22718894 ~ 22743071 (-)
LOC120567161 NA coding upstream 172737 22778405 ~ 22783217 (-)
dpf2l dpf2 coding upstream 224742 22830410 ~ 22840569 (-)
si:ch211-168f7.5 LOC103356264,LOC104942684 coding upstream 256480 22862148 ~ 22874782 (-)
ehd1a LOC104934092,LOC103356238,LOC105928696,LOC102204816,LOC101482200,LOC100701452,LOC104942686 coding upstream 278417 22884085 ~ 22899160 (-)
G107070 NA non-coding downstream 6259 22592660 ~ 22594881 (-)
LOC120566739 NA non-coding downstream 8894 22590860 ~ 22592246 (-)
LOC120566740 NA non-coding downstream 122682 22453589 ~ 22478458 (-)
G107022 NA non-coding downstream 288102 22312806 ~ 22313038 (-)
G107020 NA non-coding downstream 289297 22311620 ~ 22311843 (-)
G107097 NA non-coding upstream 78065 22683733 ~ 22685458 (-)
G107102 NA non-coding upstream 107369 22713037 ~ 22718770 (-)
G107160 NA non-coding upstream 250457 22856125 ~ 22856346 (-)
G107215 NA non-coding upstream 269828 22875496 ~ 22876459 (-)
G107220 NA non-coding upstream 323186 22928854 ~ 22973760 (-)
G107015 NA other downstream 481073 22119685 ~ 22120067 (-)
G106988 NA other downstream 810415 21790253 ~ 21790725 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other downstream 1413487 21178852 ~ 21187653 (-)
G106728 mif other downstream 1470170 21127838 ~ 21130970 (-)
LOC120566885 ppp2r2c other downstream 1491073 21075757 ~ 21110067 (-)
G107117 NA other upstream 85492 22691160 ~ 22692831 (-)
G107235 rom1,LOC103366586,LOC102779683 other upstream 385319 22990987 ~ 22993229 (-)
trpt1 trpt1,LOC102777684 other upstream 486897 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other upstream 524041 23129709 ~ 23134785 (-)
rnaseh2c rnaseh2c other upstream 578524 23184192 ~ 23187058 (-)

Expression


Co-expression Network