G107161


Basic Information

Item Value
gene id G107161
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 22856655 ~ 22856868 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU143988
gttgagaaacctcagatttgattgtagtttttgcaagttcaacatgggttataggtcgaaagttgaatgaatgagtacttatgtccttttgatttcttacagggtgagtcgttgtagcccataacacgctagcattctgctaatgaatgctgattggtcagtgaaggagtgattacgatcggagatcccgcttgacggcatccgaagcagagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143988 True 214 lncRNA 0.43 1 22856655 22856868

Neighbor

gene id symbol gene type direction distance location
LOC120566951 LOC102310073,LOC103356241,LOC104942682 coding upstream 954 22847118 ~ 22855701 (+)
LOC120567435 NA coding upstream 33625 22815142 ~ 22823030 (+)
LOC120567165 LOC100699826,LOC104947027,LOC103356244 coding upstream 50832 22794685 ~ 22805823 (+)
LOC120567166 NA coding upstream 62447 22789614 ~ 22794208 (+)
zdhhc24 zdhhc24 coding upstream 67936 22784610 ~ 22788719 (+)
ttc9c ttc9c coding downstream 1757 22858625 ~ 22862079 (+)
map1lc3cl LOC103356239,LOC101159112,LOC100701181,LOC102781115,LOC101482496 coding downstream 20929 22877797 ~ 22879471 (+)
LOC120566913 LOC107377419,LOC103374189,LOC100712009,LOC106536320 coding downstream 85594 22942462 ~ 22949531 (+)
LOC120566541 LOC102082053,LOC102202526,LOC101485142 coding downstream 122451 22979319 ~ 22987555 (+)
ccdc88b LOC103366585 coding downstream 141658 22998526 ~ 23039438 (+)
G107149 NA non-coding upstream 32793 22823601 ~ 22823862 (+)
LOC120567160 NA non-coding upstream 131002 22723025 ~ 22725653 (+)
G107073 NA non-coding upstream 225285 22631079 ~ 22631370 (+)
G107050 NA non-coding upstream 441320 22415002 ~ 22415335 (+)
LOC120566464 NA non-coding upstream 459604 22390353 ~ 22397051 (+)
G107164 NA non-coding downstream 9100 22865968 ~ 22866201 (+)
LOC120566955 NA non-coding downstream 10211 22867079 ~ 22875098 (+)
G107170 LOC103356238,LOC104934092,LOC105928696,LOC104942686,LOC106516021 non-coding downstream 27209 22884077 ~ 22887891 (+)
G107182 LOC102781801,LOC102213887,LOC101468765,LOC100701998,LOC103374192 non-coding downstream 58426 22915294 ~ 22916077 (+)
G107185 NA non-coding downstream 62985 22919853 ~ 22956899 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other upstream 1387828 21448800 ~ 21468827 (+)
zdhhc5b zdhhc5 other upstream 1505677 21289531 ~ 21350978 (+)
selenoh selenoh other upstream 1573426 21279687 ~ 21283229 (+)
hrh2a LOC103354784,LOC104948895 other upstream 1909240 20934729 ~ 20947415 (+)
G106465 LOC104955902 other upstream 2504488 20351721 ~ 20352167 (+)
G107163 LOC103356264 other downstream 5322 22862190 ~ 22865676 (+)
ubxn1 ubxn1,LOC103374193 other downstream 46887 22903755 ~ 22909562 (+)
rom1b rom1,LOC102779683 other downstream 93727 22950595 ~ 22997038 (+)
G107168 NA other downstream 98104 22954972 ~ 22973761 (+)
flrt1b LOC103374305,LOC102200053 other downstream 243157 23100025 ~ 23132685 (+)

Expression


Co-expression Network