G107170 (LOC103356238,LOC104934092,LOC105928696,LOC104942686,LOC106516021)


Basic Information

Item Value
gene id G107170
gene name LOC103356238,LOC104934092,LOC105928696,LOC104942686,LOC106516021
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 22884077 ~ 22887891 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU143999
ACCACGAGTCAGATGGTACAGTATTCCTTTTTATTTACCtggcaaaataataaaaagggaaGCATTTGGAAAGTCCAAGTTAACAGTcaggaaatacaaaaatatagatgacacaattataatagctgtttttatttatttcctctctctctctccaaatggaaaaagaaaactATATTTCTTTGGATCAACATATAATAATATGGACTGTATACTTAGAAGACATCTTTTACACAGGATGCACAAATCCATGTTCAGCCCCATCATGCGACTTCCAACTACCCATCAGTTCATGATCCGGTAATGTCCTTTCATCCATTTGCAAATCAACCTCACTCATTTATTTCTAACAGATACCTAAATATTATTCCCTAATGCACAAAGATGGACATTTGTCTGAAGAGTCCTAAACATGATGCAAAAGCATTGACATGGCTAgCCTCCAGGGCTGTCCCACGTTTGGACGGTGGCACCAGGTGTTCAGGCAGCGCGGGCGGCAACTCGTGACCCTCCAGCTTCACTTTGATCAGGTGGTTGGCCAGGGCGAACTCCTCATCATCGAGGAGGCCATCTTTATCCACGTCTGCTAGCTTCCAGATTTTTCCCAGGACCGTGTTGGGCAGCTTGGACTTCAGCATCTCCTTCTTGGCTGCAGCGCCGGACACTTTGCCGTTGATGGGTGAGAGGGTGTAGAAGATCTCATCATATGTAGGCTTGTCACGACCCACCACCCACTCCAGCTCATCGATGCCTTCGCTGGCACCCTCTCCATAGCCATGACCAAAGGGACCATTCATGGTTCCCTCAAAGGCTCCACCCTTGACGGACTGGCTGGGCATGGCGGCTTCTTCCTGGCGCACCATCGCCATGAGACGTGCAATGTCGTTGGCGAGCATGTCCTCCACCGCCTCCAGCAGCTTTGGCTTCAGCGCTGCGAACTTAGAGAAGTCCTGGCCATTCAGCAGCTCCTGCATCTTGGCGAGGTTGGGGAAGTCTCCAGGTGAGATCTGGTGCTCCTTCTCGATCTTATGGTAGATTTCTCCCAGGTTGGCTATCAGCTCCTTCTTCTTGGATTCCTTTCCAAACACACTTGGCATGTCCTTTTTCAGAGAGCTGATAATGTAGGCCTGTACCTTGGCAAGGCGTGCTCGTTTGATGAGGTCATTGAGTTTGCGTAGAGCGGCGTTACGTGGCAACGACTGGATATCTAAGAACAGGTCCTGCTCCTCTGCCTCAAACAGCTTCCTGTTGTCTGGGACCAACAGGGGCTGGGCCCAGAACGACCCAATGTACACACGCACAACCTGGAATCAAGTTAGTTTAATGAGTTAACCTCCAATAACCTCAACTGATCATCAGGTTACACTTTACTACCCACACAAGAGGAAAATATTTCACAAGTCACATACATGACACCGCAATCTGGCTAGAAAGtttaaaacagacacaaaaataaatttgcATACTCAAAATAGACATACAGGATATGAAATAATGCAATACAGGACTGTGAGGTTGACAGTGAAGCAACAATAAAAGTTTTAAGCGTATGTGC

Function

NR:

description
PREDICTED: EH domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143999 True 1555 lncRNA 0.46 5 22884077 22887891

Neighbor

gene id symbol gene type direction distance location
map1lc3cl LOC103356239,LOC101159112,LOC100701181,LOC102781115,LOC101482496 coding upstream 4606 22877797 ~ 22879471 (+)
ttc9c ttc9c coding upstream 21998 22858625 ~ 22862079 (+)
LOC120566951 LOC102310073,LOC103356241,LOC104942682 coding upstream 28376 22847118 ~ 22855701 (+)
LOC120567435 NA coding upstream 61047 22815142 ~ 22823030 (+)
LOC120567165 LOC100699826,LOC104947027,LOC103356244 coding upstream 78254 22794685 ~ 22805823 (+)
LOC120566913 LOC107377419,LOC103374189,LOC100712009,LOC106536320 coding downstream 54571 22942462 ~ 22949531 (+)
LOC120566541 LOC102082053,LOC102202526,LOC101485142 coding downstream 91428 22979319 ~ 22987555 (+)
ccdc88b LOC103366585 coding downstream 110635 22998526 ~ 23039438 (+)
fermt3b fermt3 coding downstream 270478 23158369 ~ 23173854 (+)
zbtb3 LOC105026702 coding downstream 288947 23176838 ~ 23182934 (+)
LOC120566955 NA non-coding upstream 8979 22867079 ~ 22875098 (+)
G107164 NA non-coding upstream 17876 22865968 ~ 22866201 (+)
G107161 NA non-coding upstream 27209 22856655 ~ 22856868 (+)
G107149 NA non-coding upstream 60215 22823601 ~ 22823862 (+)
LOC120567160 NA non-coding upstream 158424 22723025 ~ 22725653 (+)
G107182 LOC102781801,LOC102213887,LOC101468765,LOC100701998,LOC103374192 non-coding downstream 27403 22915294 ~ 22916077 (+)
G107185 NA non-coding downstream 31962 22919853 ~ 22956899 (+)
G107187 ganab non-coding downstream 37918 22925809 ~ 22926736 (+)
G107191 ganab non-coding downstream 41378 22929269 ~ 22932162 (+)
G107203 NA non-coding downstream 70267 22958158 ~ 22958580 (+)
G107163 LOC103356264 other upstream 18401 22862190 ~ 22865676 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other upstream 1415250 21448800 ~ 21468827 (+)
zdhhc5b zdhhc5 other upstream 1533099 21289531 ~ 21350978 (+)
selenoh selenoh other upstream 1600848 21279687 ~ 21283229 (+)
hrh2a LOC103354784,LOC104948895 other upstream 1936662 20934729 ~ 20947415 (+)
ubxn1 ubxn1,LOC103374193 other downstream 15864 22903755 ~ 22909562 (+)
rom1b rom1,LOC102779683 other downstream 62704 22950595 ~ 22997038 (+)
G107168 NA other downstream 67081 22954972 ~ 22973761 (+)
flrt1b LOC103374305,LOC102200053 other downstream 212134 23100025 ~ 23132685 (+)
tgfb5 LOC104925539,LOC103374198,LOC102800105,LOC105920438,LOC102314494,LOC101466107,LOC100690458 other downstream 364864 23252755 ~ 23262261 (+)

Expression


Co-expression Network