G107220


Basic Information

Item Value
gene id G107220
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 22928854 ~ 22973760 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU144063
AGACTGCATTGATACGAATTCGGCGTTCTTTGAGGCGTAGCAGGTTAAACCGGTCttgtttatttccttttaataCTGAGTTTCGGTCGTTGGAGATGAAAATATGTAGATTTAATCTACTTAATTtgatatttgtgtgttttgggaatgaagtgtgttttgatTAGCTAGAGACCGTAAGAATTAGGCCCTGCCTCGAacgcttagctagctagctgacattaACATACGTTAACTTCAAGATTGAATTGTACCTTCTATTGTCTTTTTAAGCAGTCTTTCTCTTTAATTTTTACTATTCAACGGGCAAAAATGTCAATGAAAGTCCGCCTTGATCCGaaacctagctagctaagcgtaacttttttttttgtcgacactagctagtaacgttaAATATCCGCTAACGGCAGGCCTAGCGAGCCAAATATAGGCTCATTTTAATGCCAACATTAGGACGTCACGCTTTCGTTTTTCGTCACGCTCGTCTTTTTGGCCTGACAAAATAACgttaacttttttcttttcttccagtaactgttaTATTTTTGTCAAAGGTTAAcgttagtattttttttttttctatgagtCGAATCCAAGTTGGTGCTTGTAACGGTAGTTGGCTCAAGATGGGAGCCGTGACGTAGCAGCCTGCAACGGCTATTGGTTGATTTGAATAACTCGTCACGCAACTAGAGATGGAAAGGGAGTGGTCTGTATTTTTACCAGCTGCGGGTCAGGTACGGTGCTCAAAGCTACACCGAGAGACAAGTGTAACCACTAACTGTATTAGAAGCCTTGAATAGTAATTTAATGATGGGCTGCGACTAGATTACTGTGAACTTAACAAGACATTGAAACGATACTGAGGGTTAGGACTTGCTCGTAAACAGATCTTGGAATAGAGTTATTgaactgggaaaaaaaaaaaacgtaagcAGACTTTAACCTGCGACGGTTACTTCAGAGAGCAGTTGTCTATAAATGGCAAGaagaataatataaaacatGCTATGGCTTTATTTAAAAGTGAAGTTAGTCAGTTATAAATATCAGTTAAGAACTTCGAGGGACAGAGGCAcccgtttttttcttttcttttttttttttcttcaaagaaCTTTGTTGTAAACCAAAGAAGCATTTGAGACAATCACGttatttttgtgtatttaaaaaGGGTGAGGCTCAGTCTCTAGTCTATGCCATTGTTTAGGCAAGCATTGATAATGCATTtatgcagattttctttttttttgattcCTTAAGGTGCACTTTAGTGGCTCGGTCATCACACTTTCCTTACAAGTGGTAGTTTTAAAGTTTGAAgagtgtttgtatttcttttgacCACAATGACACAGGAAATGGTTTTAAAGCAGCTTTCAAGGAATCAGAGCTTGTATAATCAAAGCTGTAGCTCAATTAATCTATATGGACTTTGAGttgtcaatttttttttttttttttttttttatttat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144063 True 1482 lncRNA 0.37 2 22928854 22973760

Neighbor

gene id symbol gene type direction distance location
si:ch211-114c17.1 LOC103374192,LOC100701998,LOC102296932 coding downstream 10072 22910157 ~ 22918782 (-)
ehd1a LOC104934092,LOC103356238,LOC105928696,LOC102204816,LOC101482200,LOC100701452,LOC104942686 coding downstream 29694 22884085 ~ 22899160 (-)
si:ch211-168f7.5 LOC103356264,LOC104942684 coding downstream 54072 22862148 ~ 22874782 (-)
dpf2l dpf2 coding downstream 88285 22830410 ~ 22840569 (-)
LOC120567161 NA coding downstream 145637 22778405 ~ 22783217 (-)
macrod1 NA coding upstream 77657 23051417 ~ 23155345 (-)
trnaw-cca_10 NA coding upstream 187099 23160859 ~ 23160930 (-)
trnaw-cca_11 NA coding upstream 187628 23161388 ~ 23161459 (-)
trnaw-cca_12 NA coding upstream 191597 23165357 ~ 23165428 (-)
kcnk4a LOC104959797 coding upstream 293154 23266914 ~ 23282656 (-)
G107215 NA non-coding downstream 52395 22875496 ~ 22876459 (-)
G107160 NA non-coding downstream 72508 22856125 ~ 22856346 (-)
G107102 NA non-coding downstream 210084 22713037 ~ 22718770 (-)
G107097 NA non-coding downstream 243396 22683733 ~ 22685458 (-)
G107072 mid2 non-coding downstream 323186 22601140 ~ 22605668 (-)
G107282 NA non-coding upstream 196388 23170148 ~ 23224456 (-)
G107290 LOC105026702,LOC106604372 non-coding upstream 205932 23179692 ~ 23181717 (-)
G107324 atg2a,si:ch73-45o6.2,LOC107660800 non-coding upstream 268277 23242037 ~ 23263899 (-)
G107610 NA non-coding upstream 818294 23792054 ~ 23792502 (-)
G107667 NA non-coding upstream 1225739 24199499 ~ 24259346 (-)
G107117 NA other downstream 236023 22691160 ~ 22692831 (-)
G107015 NA other downstream 808787 22119685 ~ 22120067 (-)
G106988 NA other downstream 1138129 21790253 ~ 21790725 (-)
LOC120566634 LOC104961169,LOC103354768,LOC101069382 other downstream 1741201 21178852 ~ 21187653 (-)
G106728 mif other downstream 1797884 21127838 ~ 21130970 (-)
G107235 rom1,LOC103366586,LOC102779683 other upstream 17227 22990987 ~ 22993229 (-)
trpt1 trpt1,LOC102777684 other upstream 118805 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other upstream 155949 23129709 ~ 23134785 (-)
rnaseh2c rnaseh2c other upstream 210432 23184192 ~ 23187058 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other upstream 910828 23884588 ~ 23988901 (-)

Expression


Co-expression Network