G107340


Basic Information

Item Value
gene id G107340
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 23285363 ~ 23287678 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU144221
AGGCCTCTCTTGGTTTCACCCTTTGGGAAAACAAGTCACACTTATCTTGACAGGCACTTGTTTAGAAAAGCATCCACTAGGCACTGTTTTATTCAAAGTAGGCTGCAGCTAGACCCATAAGTTAATGCAGAGACACTCAAAACTAAACAATCCCTTTGGAAAAGTGGTTGTAAACTTCAAATAAACATCAACAAGCAACACTAAATCAATACCTCTGTACCTAAATATAAAGTGGGTGTAAAGTGACAGCATTGTGATggcaaaaaaacagcaaagtcTCCACGCAGCAATTAGAGGATAAACTAGTGACCACACAATGGAAGTGTTTATTCTGCCAATGCAGACCCAGTTACCTGCACATACACAAAAGTCCATGTGTGATAGCAGCACCCTTTTTAAAACTGGTCCTGTGTTGGTTTGAAGGTCTGAAGTACTTCAGGTTGCTGGTGACTGGAGTGTCCCTGTATGGCTGCTGTCGTCCATCACTGAGGTTCATCGTCAAGCCTCAGTGATCAGTTCTTTTCACCAGATCAATAGACAACTGTAACTGTGTTTTAAtctgtctcttcctcctgtCTCGGGTCTTTCGGAGGAACAGGTACGGCAGTTGTGCCTAACAGACCTCTTCTCACAATGTAGGGGCACGAGGGACCACTGGGGATGTCGGCAAAAC

Function

GO: NA

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU144221 True 673 lncRNA 0.44 2 23285363 23287678

Neighbor

gene id symbol gene type direction distance location
trmt112 trmt112,LOC102775658 coding upstream 33988 23244451 ~ 23251375 (+)
LOC120566542 atg2a coding upstream 41764 23238348 ~ 23243599 (+)
atg2a atg2a coding upstream 48199 23215893 ~ 23237164 (+)
nxf1a nxf1,LOC102775940 coding upstream 71430 23200615 ~ 23213933 (+)
si:ch73-22a13.3 LOC102780362,LOC103374341,LOC102213327 coding upstream 86408 23193164 ~ 23198955 (+)
zgc:162144 LOC100705221,LOC102196865,LOC102798772,LOC101467665,LOC103374172,LOC107377608 coding downstream 23058 23310736 ~ 23314230 (+)
nudt22 nudt22 coding downstream 65580 23353258 ~ 23357565 (+)
hs6st2 LOC104925546,LOC104960671,LOC103374067 coding downstream 86539 23374217 ~ 23377146 (+)
mbnl3 LOC100691532,LOC101470482,LOC102193800,LOC102309145,LOC102795898 coding downstream 90532 23378210 ~ 23410314 (+)
rap2c rap2c,LOC105911927,LOC106515678,LOC100691801,LOC107560880 coding downstream 123331 23411009 ~ 23415301 (+)
G107341 NA non-coding upstream 149 23282979 ~ 23285214 (+)
G107334 NA non-coding upstream 14142 23270799 ~ 23271221 (+)
G107276 NA non-coding upstream 47913 23237251 ~ 23237450 (+)
G107203 NA non-coding upstream 326783 22958158 ~ 22958580 (+)
G107191 ganab non-coding upstream 353201 22929269 ~ 22932162 (+)
G107353 stx5 non-coding downstream 31714 23319392 ~ 23320649 (+)
G107377 NA non-coding downstream 129546 23417224 ~ 23417543 (+)
G107410 ccdc85b,LOC102791751 non-coding downstream 248183 23535861 ~ 23539382 (+)
G107507 slc25a5,LOC106926499,LOC103140121,LOC101464643,LOC102200398,LOC104931197 non-coding downstream 355614 23643292 ~ 23644515 (+)
G107531 NA non-coding downstream 398916 23686594 ~ 23688072 (+)
G107333 NA other upstream 15147 23268791 ~ 23270216 (+)
tgfb5 LOC104925539,LOC103374198,LOC102800105,LOC105920438,LOC102314494,LOC101466107,LOC100690458 other upstream 23102 23252755 ~ 23262261 (+)
flrt1b LOC103374305,LOC102200053 other upstream 152678 23100025 ~ 23132685 (+)
rom1b rom1,LOC102779683 other upstream 288325 22950595 ~ 22997038 (+)
ubl3b ubl3,LOC100692344,LOC101472018,LOC104925552,LOC103390851,LOC104960676 other downstream 166862 23454540 ~ 23466205 (+)
LOC120566905 LOC104953971 other downstream 200607 23488285 ~ 23492538 (+)
G107386 cfl1 other downstream 205166 23492844 ~ 23494989 (+)
G107487 mrpl11,LOC102790704 other downstream 302650 23590328 ~ 23626289 (+)
LOC120566416 NA other downstream 567847 23855525 ~ 23865274 (+)

Expression


Co-expression Network