G107377


Basic Information

Item Value
gene id G107377
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 23417224 ~ 23417543 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU144269
GTTTAGATTTGCACGTCAAGGTAAGACAGTTGTGTTTTCTATTCATTTAATCAAACATTACAGCAGTGGTCGTTTAAAACATACAATAAGGTTAAATGCCTTTAACGCCTTGTAAAGTTTGCACAAATCACATGCATTTGGACAGGCCACATTTTATTTGTCGTGGCTCCAAAACGTACATCCACCAAAAAGTTTGGTCTTATTTTGAACCGGATCATGAACACGTGTTATGATGCAGCAATGTAGCTCTACATCTTGGTGATCACAACTTCCAATTTATACAGCTGATGTACTGCAAGAATTTTTCAAGGAAATGTgat

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU144269 True 320 lncRNA 0.37 1 23417224 23417543

Neighbor

gene id symbol gene type direction distance location
rap2c rap2c,LOC105911927,LOC106515678,LOC100691801,LOC107560880 coding upstream 1923 23411009 ~ 23415301 (+)
mbnl3 LOC100691532,LOC101470482,LOC102193800,LOC102309145,LOC102795898 coding upstream 6910 23378210 ~ 23410314 (+)
hs6st2 LOC104925546,LOC104960671,LOC103374067 coding upstream 40078 23374217 ~ 23377146 (+)
nudt22 nudt22 coding upstream 59659 23353258 ~ 23357565 (+)
zgc:162144 LOC100705221,LOC102196865,LOC102798772,LOC101467665,LOC103374172,LOC107377608 coding upstream 102994 23310736 ~ 23314230 (+)
zgc:92907 alg13 coding downstream 3631 23421174 ~ 23423701 (+)
si:zfos-80g12.1 LOC103374023,LOC107378313,LOC106515654,LOC103390849 coding downstream 13343 23430886 ~ 23443278 (+)
fosl1a fosl1 coding downstream 114560 23532103 ~ 23535698 (+)
fibpa fibp coding downstream 124433 23541976 ~ 23547733 (+)
efemp2a efemp2 coding downstream 131578 23549121 ~ 23559843 (+)
G107353 stx5 non-coding upstream 96575 23319392 ~ 23320649 (+)
G107340 NA non-coding upstream 129546 23285363 ~ 23287678 (+)
G107341 NA non-coding upstream 132010 23282979 ~ 23285214 (+)
G107334 NA non-coding upstream 146003 23270799 ~ 23271221 (+)
G107276 NA non-coding upstream 179774 23237251 ~ 23237450 (+)
G107410 ccdc85b,LOC102791751 non-coding downstream 118318 23535861 ~ 23539382 (+)
G107507 slc25a5,LOC106926499,LOC103140121,LOC101464643,LOC102200398,LOC104931197 non-coding downstream 225749 23643292 ~ 23644515 (+)
G107531 NA non-coding downstream 269051 23686594 ~ 23688072 (+)
G107565 dlg3,LOC102786504 non-coding downstream 381114 23798657 ~ 23800227 (+)
G107570 NA non-coding downstream 467050 23884593 ~ 23985057 (+)
G107333 NA other upstream 147008 23268791 ~ 23270216 (+)
tgfb5 LOC104925539,LOC103374198,LOC102800105,LOC105920438,LOC102314494,LOC101466107,LOC100690458 other upstream 154963 23252755 ~ 23262261 (+)
flrt1b LOC103374305,LOC102200053 other upstream 284539 23100025 ~ 23132685 (+)
rom1b rom1,LOC102779683 other upstream 420186 22950595 ~ 22997038 (+)
ubl3b ubl3,LOC100692344,LOC101472018,LOC104925552,LOC103390851,LOC104960676 other downstream 36997 23454540 ~ 23466205 (+)
LOC120566905 LOC104953971 other downstream 70742 23488285 ~ 23492538 (+)
G107386 cfl1 other downstream 75301 23492844 ~ 23494989 (+)
G107487 mrpl11,LOC102790704 other downstream 172785 23590328 ~ 23626289 (+)
LOC120566416 NA other downstream 437982 23855525 ~ 23865274 (+)

Expression


Co-expression Network