XLOC_004701


Basic Information

Item Value
gene id XLOC_004701
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 22618388 ~ 22619122 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010735
CTTTCCTGAAGAGCAGGAGAGCTGACCTATAGGATTGTTCAAACAGTTCATCTTCTAAGTGATGTAACCAATCACATTCTCGCTTCCAACCAAGGGCGGGACATTTTTTCAGATGTGGTGAAACTGTCTCTGGACAAAACTTATTCATGTTTTAACTTTAACTTAACTTATGAATATACCTTTGGGAGCATGTTAATTTCATAATTACCAACTATAACTATCATATCGAATGATTTTGCTTCTCGAAGACACTAATAAATCTGTCCAGAATGAATCACACGGACTGGAAAGAAACCACCCCGGTTTTCATAACAAGATTTGGGTCAAAGCTGATAAAGCCACTTCATACACAAGTAAGTAGATCAACAGGATATAAATCAAACTGTGTCTCATCTGCTTGCCTTCTTCTTTGCCTC

Function

GO:

id name namespace
GO:0006720 isoprenoid metabolic process biological_process
GO:0035197 siRNA binding molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00010735 True 416 lncRNA 0.38 2 22618388 22619122

Neighbor

gene id symbol gene type direction distance location
XLOC_004699 capgb coding upstream 308 22576404 ~ 22618080 (+)
XLOC_004700 CR925753.1 coding upstream 39858 22578404 ~ 22578530 (+)
XLOC_004698 polr2a coding upstream 45091 22560067 ~ 22573297 (+)
XLOC_004697 hdlbpb coding upstream 173327 22404108 ~ 22445061 (+)
XLOC_004696 NA coding upstream 313547 22258962 ~ 22304841 (+)
XLOC_004702 mfsd8 coding downstream 9582 22628704 ~ 22645215 (+)
XLOC_004703 si:dkey-219e21.4 coding downstream 38801 22657923 ~ 22664563 (+)
XLOC_004704 cdca9 coding downstream 53201 22672323 ~ 22815847 (+)
XLOC_004705 afap1 coding downstream 204097 22823219 ~ 22916314 (+)
XLOC_004706 rab18a coding downstream 302355 22921477 ~ 22933524 (+)
XLOC_004695 NA non-coding upstream 598618 22017946 ~ 22019770 (+)
XLOC_004694 NA non-coding upstream 818992 21757817 ~ 21799396 (+)
XLOC_004691 FO704814.1 non-coding upstream 1180930 21437346 ~ 21437458 (+)
XLOC_004707 NA non-coding downstream 418325 23037447 ~ 23040091 (+)
XLOC_004708 BX927205.1 non-coding downstream 491041 23110163 ~ 23110277 (+)
XLOC_004711 NA non-coding downstream 835307 23454429 ~ 23605722 (+)
XLOC_004712 BX005058.1 non-coding downstream 958144 23577266 ~ 23577391 (+)
XLOC_004713 NA non-coding downstream 1030770 23649892 ~ 23651056 (+)

Expression


Co-expression Network