G107610


Basic Information

Item Value
gene id G107610
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 23792054 ~ 23792502 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU144586
gtgtgtgtgtgcactcgtGTGaagtGTGTTCTCAGAGGGCTTTTGCTGGACCATAGCAGCGGTTTGGCCTCTCTAGCATCTTAAAACCGAGGCAGTCTGAATAGCCTGCTGAAGGATGAGTCATAGTGGCTAACGCTAAAGCAGAGTGGGTGTGTCGAGCAGTGGGTGGCTCATTGTGTCTGCGTACATTAATATGAGTGggt

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU144586 True 203 lncRNA 0.51 2 23792054 23792502

Neighbor

gene id symbol gene type direction distance location
kdrl LOC103373800 coding downstream 34903 23710021 ~ 23757151 (-)
cdx4 cdx4 coding downstream 94564 23694270 ~ 23697490 (-)
chic1 LOC102788766,LOC101478093,LOC108231262,LOC104958396 coding downstream 99245 23686594 ~ 23692809 (-)
slc25a43 slc25a43,LOC102789340 coding downstream 140332 23646135 ~ 23651722 (-)
slc25a5 slc25a5,LOC106926499,LOC104931197,LOC103140121 coding downstream 146558 23643288 ~ 23645496 (-)
gdpd2 NA coding upstream 65520 23858022 ~ 23868756 (-)
stard14 NA coding upstream 86559 23879061 ~ 23883457 (-)
arr3b NA coding upstream 102093 23894595 ~ 23900300 (-)
f9a NA coding upstream 290802 24083304 ~ 24091230 (-)
zic6 LOC104917996,LOC104957987,LOC103376516,LOC101465244,LOC102782580,LOC102312981 coding upstream 529555 24322057 ~ 24330760 (-)
G107324 atg2a,si:ch73-45o6.2,LOC107660800 non-coding downstream 528155 23242037 ~ 23263899 (-)
G107282 NA non-coding downstream 567598 23170148 ~ 23224456 (-)
G107290 LOC105026702,LOC106604372 non-coding downstream 610337 23179692 ~ 23181717 (-)
G107220 NA non-coding downstream 818294 22928854 ~ 22973760 (-)
G107215 NA non-coding downstream 915595 22875496 ~ 22876459 (-)
G107667 NA non-coding upstream 406997 24199499 ~ 24259346 (-)
LOC120566461 NA non-coding upstream 495647 24288149 ~ 24381312 (-)
G107742 NA non-coding upstream 639499 24432001 ~ 24454134 (-)
G107755 arhgef6 non-coding upstream 655619 24448121 ~ 24450769 (-)
G107759 NA non-coding upstream 676447 24468949 ~ 24469187 (-)
rnaseh2c rnaseh2c other downstream 604996 23184192 ~ 23187058 (-)
trpt1 trpt1,LOC102777684 other downstream 615028 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other downstream 657269 23129709 ~ 23134785 (-)
G107235 rom1,LOC103366586,LOC102779683 other downstream 798825 22990987 ~ 22993229 (-)
G107117 NA other downstream 1099223 22691160 ~ 22692831 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other upstream 92086 23884588 ~ 23988901 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other upstream 780939 24573441 ~ 24579099 (-)
trnav-uac_15 NA other upstream 1069468 24861970 ~ 24862184 (-)
ndufa1 NA other upstream 1470670 25263172 ~ 25264864 (-)
G107989 NA other upstream 1487101 25279603 ~ 25288086 (-)

Expression


Co-expression Network