G107742


Basic Information

Item Value
gene id G107742
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 24432001 ~ 24454134 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU144759
GACCATACCAAACGCAGAGTACAGAGTGtctagaaagaaagaaaaaaagcataacaATACTTGCAACAACAATAATTGCATAGAACAACCTTTTgaaaacaatacacacagtgGTCTGGAGATAAACATAATGAAGACTGAGTTCAACCCCCTCCCACCAGTAAGTGCTCGCTGCGGCTATTGGGAATTGAAAACAAGAGTATGTGGTacttaattaaaacaatttagGGTACAGGAACAGCAATATGTTAATCTCAACAGTGAACATTATGAGAGTCAGACATCTGTACAGGAAGCAAGAGTCTCTGTAACACTGAGGGGAATCTGGCTGCCAACTAAACGTCCCATTAGGAAGAACAATCAAAGATCAGCTTCTTTTCTTGCtgaagtgcccttgagcaagacacatCTCTGCTGCAGATGTACCAGTGCTGCCTTGCACCCTACACAGTACTCTGACCTCCCTGGAAAGAGGCACAAAAACAGCACTTGAGGGATTGTacaatattattacattttggatCACATGTGATGAAAATTAGGACCTGGACAGTGATCTTTGAACAATCATCAATATCAAGAGACTAGATTAAATAAAAGGcaaatggaaaataattaatagcCTAACTGTGTGGTGGATTAACCACATGGCCTGGCCCTTTTTGGTTAATAAATTGGGTTAATtcttacattattattattgcaatttCTCAAAATCTGACCTTCAATGCTGGGACTAACCCAGAGGTCAGGCAGTAAAGCAGTCACTTATTGCATTTCAATAGCATCCACCGCTGCTCTTCAGCACAGCAAGTAGATAACAGAGTTGacagtgcacacacactcaacctCATGAGGAAATGTACCGCTGTGGGTCTTTGTAAAGAGGCTGCATCTTTAAGCATGCCAATAccggtttgtttttttagaccctatatatagatatatataccaaTTAAGCTAGAGAAATATTACACCAAACCACCTGTGACACTTTCAATATAAATCATGCATTTAGTCCCAGTCTTAAACTCTTAAGTTTATCGAACACCTTTCGGGAGGCACTTAAACAGTTGAGCTCTACACCCACAAATAAATCTTTCGTTTTATTTCCTGTCTCCATCAGCTCTGGAGGACCCTGTTAGGAGGCCACAGAGGCTGCAAACAAAAACCTCTGAATTCCGAAGTCAGACtcatttttaaaatcattttcCCTCTTTTGTGATGAAAAAATGTCTACTTTCCCTTGGGCCAAAATGAGGATGTTTTGTTTTGCCTTCACACCAATGTAGTTTAATAAAATTTCAGACAAATGTAAAGGCagcaaaacaatatatataaggCTAACACCACAATTAAATGCTTGGGTGAACAATAAATAAGGAAtactctttgaaaaaaaatcagaataAAGCAAGGCTatgtaattaatgtgttaaaatTACACTTGTACATATTTTAGTAAGAAGTGGAGGGGTGACATCTTTGTCATTATTTGCGAACTCTTGTCTATAAAGGATATGTAGTTAAGCCTTTCCTATTCTATTATGCAGCTGCATCCCTGATAGCTTTGGACTATATATCTGAATATCTTGATTATCACATTTCTGATGCAGAATTCATACTGTAAAAACACTGTACATTCATGCagtttttaaataaacagtcaaGGCTGCATTTGGAAACAACTGAATGTAGCATGATGAGCTAACCTGTTTGAATTGCTTAAACGCCTACAAAATGGCTTGGAAAATGTGAATGTCTAGAAATGCCTATCGCACATGCTCACGAAAGCACAACAAATCCATTTCCCCATTATCCTTTtgacaaataaaatatgaaaatgaaaatgaaaaaaattatgtGAGGAGAAGAAAATGTGTCCCCTTGGTAAGAGAAGTGCATGCAAGAGAACACCTATTGGACCTGATGGCTTCGTACTCCTTTTCTATTTCTAACTGAAGCAAAAGAAGCAGCGGAGAACTTGTTTTTGTCCATAATTGTTCCATTTCCTGGGGGAGTGTTCACAGTGCCAGTCGAGCAAGAAGCAGTATGTTTGATAAACATCCCACTTTACCAGTCTTGGTTTAGCTGAGCTGCTTCGCGAGGAAGCTATATGTGTGGTCTCATCTAGTGAGGTTGGATCAGGAAGACAGATCAGATTTaatcaaaaatgtcaaatgaaGCTCCAGCACTTGAAGTGAAGAAACTCCAAGCATTGTCGTCAGAAAGTCCAACTCTGCTGTGTGTGATTGAAATATGGAGACACAACATAGACgcacgcacacacacacacacacacacacacacacacacacacacacacacacacacacc
>TU144760
GACCATACCAAACGCAGAGTACAGAGTGtctagaaagaaagaaaaaaagcataacaATACTTGCAACAACAATAATTGCATAGAACAACCTTTTgaaaacaatacacacagtgGTCTGGAGATAAACATAATGAAGACTGAGTTCAACCCCCTCCCACCAGTAAGTGCTCGCTGCGGCTATTGGGAATTGAAAACAAGAGTATGTGGTacttaattaaaacaatttagGGTACAGGAACAGCAATATGTTAATCTCAACAGTGAACATTATGAGAGTCAGACATCTGTACAGGAAGCAAGAGTCTCTGTAACACTGAGGGGAATCTGGCTGCCAACTAAACGTCCCATTAGGAAGAACAATCAAAGATCAGCTTCTTTTCTTGCtgaagtgcccttgagcaagacacatCTCTGCTGCAGATGTACCAGTGCTGCCTTGCACCCTACACAGTACTCTGACCTCCCTGGAAAGAGGCACAAAAACAGCACTTGAGGGATTGTacaatattattacattttggatCACATGTGATGAAAATTAGGACCTGGACAGTGATCTTTGAACAATCATCAATATCAAGAGACTAGATTAAATAAAAGGcaaatggaaaataattaatagcCTAACTGTGTGGTGGATTAACCACATGGCCTGGCCCTTTTTGGTTAATAAATTGGGTTAATtcttacattattattattgcaatttCTCAAAATCTGACCTTCAATGCTGGGACTAACCCAGAGGTCAGGCAGTAAAGCAGTCACTTATTGCATTTCAATAGCATCCACCGCTGCTCTTCAGCACAGCAAGTAGATAACAGAGTTGacagtgcacacacactcaacctCATGAGGAAATGTACCGCTGTGGGTCTTTGTAAAGAGGCTGCATCTTTAAGCATGCCAATAccggtttgtttttttagaccctatatatagatatatataccaaTTAAGCTAGAGAAATATTACACCAAACCACCTGTGACACTTTCAATATAAATCATGCATTTAGTCCCAGTCTTAAACTCTTAAGTTTATCGAACACCTTTCGGGAGGCACTTAAACAGTTGAGCTCTACACCCACAAATAAATCTTTCGTTTTATTTCCTGTCTCCATCAGCTCTGGAGGACCCTGTTAGGAGGCCACAGAGGCTGCAAACAAAAACCTCTGAATTCCGAAGTCAGACtcatttttaaaatcattttcCCTCTTTTGTGATGAAAAAATGTCTACTTTCCCTTGGGCCAAAATGAGGATGTTTTGTTTTGCCTTCACACCAATGTAGTTTAATAAAATTTCAGACAAATGTAAAGGCagcaaaacaatatatataaggCTAACACCACAATTAAATGCTTGGGTGAACAATAAATAAGGAAtactctttgaaaaaaaatcagaataAAGCAAGGCTatgtaattaatgtgttaaaatTACACTTGTACATATTTTAGTAAGAAGTGGAGGGGTGACATCTTTGTCATTATTTGCGAACTCTTGTCTATAAAGGATATGTAGTTAAGCCTTTCCTATTCTATTATGCAGCTGCATCCCTGATAGCTTTGGACTATATATCTGAATATCTTGATTATCACATTTCTGATGCAGAATTCATACTGTAAAAACACTGTACATTCATGCagtttttaaataaacagtcaaGGCTGCATTTGGAAACAACTGAATGTAGCATGATGAGCTAACCTGTTTGAATTGCTTAAACGCCTACAAAATGGCTTGGAAAATGTGAATGTCTAGAAATGCCTATCGCACATGCTCACGAAAGCACAACAAATCCATTTCCCCATTATCCTTTtgacaaataaaatatgaaaatgaaaatgaaaaaaattatgtGAGGAGAAGAAAATGTGTCCCCTTGGTAAGAGAAGTGCATGCAAGAGAACACCTATTGGACCTGATGGCTTCGTACTCCTTTTCTATTTCTAACTGAAGCAAAAGAAGCAGCGGAGAACTTGTTTTTGTCCATAATTGTTCCATTTCCTGGGGGAGTGTTCACAGTGCCAGTCGAGCAAGAAGCAGTATGTTTGATAAACATCCCACTTTACCAGTCTTGGTTTAGCTGAGCTGCTTCGCGAGGAAGCTATATGTGTGGTCTCATCTAGTGAGGTTGGATCAGGAAGACAGATCAGATTTaatcaaaaatgtcaaatgaaGCTCCAGCACTTGAAGTGAAGAAACTCCAAGCATTGTCGTCAGAAAGTCCAACTCTGCTGTGTGTGATTGAAATATGGAGACACAACATAGACgcacacacacacacacacacacacacacacacacacacacacgaggatGATCGTATGGATGTGTTCAGTGTCCGCCGTCATCCCAAGCAGAATCATTCTTCTGCTTGGCCAGTTTTCGAACCACTCTCTCCAGATCTTTGCGAGACTTCTGCTCCTCCTCCAAAAACTGCTTCATCCACTTATTCTC
>TU144763
ATTTTAGTCACTCCTTCCATCATGTAAAGGGTTTCTTGCTACCGAAAACTGAACAACCTACAAATTCCTGAACTGCACATGTGCCGAATGCTGCATGGAAAGCCCTGTCTTGGTAGATTTTCCAGTATGAATGAGGGAACATGCAGTTCATGCTGTGTGGTTGACACACGTTTAAAACCTTTGGAGTTTTCCATTTCTCACTTGGTTAAATTAACGTAATATTCACATATTATATTAAACTTTTAATAAAAGAATGACCATACCAAACGCAGAGTACAGAGTGtctagaaagaaagaaaaaaagcataacaATACTTGCAACAACAATAATTGCATAGAACAACCTTTTgaaaacaatacacacagtgGTCTGGAGATAAACATAATGAAGACTGAGTTCAACCCCCTCCCACCAGTAAGTGCTCGCTGCGGCTATTGGGAATTGAAAACAAGAGTATGTGGTacttaattaaaacaatttagGGTACAGGAACAGCAATATGTTAATCTCAACAGTGAACATTATGAGAGTCAGACATCTGTACAGGAAGCAAGAGTCTCTGTAACACTGAGGGGAATCTGGCTGCCAACTAAACGTCCCATTAGGAAGAACAATCAAAGATCAGCTTCTTTTCTTGCtgaagtgcccttgagcaagacacatCTCTGCTGCAGATGTACCAGTGCTGCCTTGCACCCTACACAGTACTCTGACCTCCCTGGAAAGAGGCACAAAAACAGCACTTGAGGGATTGTacaatattattacattttggatCACATGTGATGAAAATTAGGACCTGGACAGTGATCTTTGAACAATCATCAATATCAAGAGACTAGATTAAATAAAAGGcaaatggaaaataattaatagcCTAACTGTGTGGTGGATTAACCACATGGCCTGGCCCTTTTTGGTTAATAAATTGGGTTAATtcttacattattattattgcaatttCTCAAAATCTGACCTTCAATGCTGGGACTAACCCAGAGGTCAGGCAGTAAAGCAGTCACTTATTGCATTTCAATAGCATCCACCGCTGCTCTTCAGCACAGCAAGTAGATAACAGAGTTGacagtgcacacacactcaacctCATGAGGAAATGTACCGCTGTGGGTCTTTGTAAAGAGGCTGCATCTTTAAGCATGCCAATAccggtttgtttttttagaccctatatatagatatatataccaaTTAAGCTAGAGAAATATTACACCAAACCACCTGTGACACTTTCAATATAAATCATGCATTTAGTCCCAGTCTTAAACTCTTAAGTTTATCGAACACCTTTCGGGAGGCACTTAAACAGTTGAGCTCTACACCCACAAATAAATCTTTCGTTTTATTTCCTGTCTCCATCAGCTCTGGAGGACCCTGTTAGGAGGCCACAGAGGCTGCAAACAAAAACCTCTGAATTCCGAAGTCAGACtcatttttaaaatcattttcCCTCTTTTGTGATGAAAAAATGTCTACTTTCCCTTGGGCCAAAATGAGGATGTTTTGTTTTGCCTTCACACCAATGTAGTTTAATAAAATTTCAGACAAATGTAAAGGCagcaaaacaatatatataaggCTAACACCACAATTAAATGCTTGGGTGAACAATAAATAAGGAAtactctttgaaaaaaaatcagaataAAGCAAGGCTatgtaattaatgtgttaaaatTACACTTGTACATATTTTAGTAAGAAGTGGAGGGGTGACATCTTTGTCATTATTTGCGAACTCTTGTCTATAAAGGATATGTAGTTAAGCCTTTCCTATTCTATTATGCAGCTGCATCCCTGATAGCTTTGGACTATATATCTGAATATCTTGATTATCACATTTCTGATGCAGAATTCATACTGTAAAAACACTGTACATTCATGCagtttttaaataaacagtcaaGGCTGCATTTGGAAACAACTGAATGTAGCATGATGAGCTAACCTGTTTGAATTGCTTAAACGCCTACAAAATGGCTTGGAAAATGTGAATGTCTAGAAATGCCTATCGCACATGCTCACGAAAGCACAACAAATCCATTTCCCCATTATCCTTTtgacaaataaaatatgaaaatgaaaatgaaaaaaattatgtGAGGAGAAGAAAATGTGTCCCCTTGGTAAGAGAAGTGCATGCAAGAGAACACCTATTGGACCTGATGGCTTCGTACTCCTTTTCTATTTCTAACTGAAGCAAAAGAAGCAGCGGAGAACTTGTTTTTGTCCATAATTGTTCCATTTCCTGGGGGAGTGTTCACAGTGCCAGTCGAGCAAGAAGCAGTATGTTTGATAAACATCCCACTTTACCAGTCTTGGTTTAGCTGAGCTGCTTCGCGAGGAAGCTATATGTGTGGTCTCATCTAGTGAGGTTGGATCAGGAAGACAGATCAGATTTaatcaaaaatgtcaaatgaaGCTCCAGCACTTGAAGTGAAGAAACTCCAAGCATTGTCGTCAGAAAGTCCAACTCTGCTGTGTGTGATTGAAATATGGAGACACAACATAGACgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgaggatGATCGTATGGATGTGTTCAGTGTCCGCCGTCATCCCAAGCAGAATCATTCTTCTGCTTGGCCAGTTTTCGAACCACTCTCTCCAGATCTTTGCGAGACTTCTGCTCCTCCTCCAAAAACTGCTTCATCCACTTATTCTC

Function

NR:

description
PREDICTED: collagen alpha-1(XIV) chain-like, partial

GO: NA

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU144759 False 2337 lncRNA 0.39 2 24432001 24453879
TU144760 False 2465 lncRNA 0.39 2 24451301 24453879
TU144763 True 2742 lncRNA 0.39 2 24451301 24454134

Neighbor

gene id symbol gene type direction distance location
LOC120566938 tm9sf2 coding downstream 13690 24408676 ~ 24418311 (-)
zic6 LOC104917996,LOC104957987,LOC103376516,LOC101465244,LOC102782580,LOC102312981 coding downstream 101241 24322057 ~ 24330760 (-)
f9a NA coding downstream 340771 24083304 ~ 24091230 (-)
arr3b NA coding downstream 531701 23894595 ~ 23900300 (-)
stard14 NA coding downstream 548544 23879061 ~ 23883457 (-)
cd40lg NA coding upstream 671 24454805 ~ 24457209 (-)
tmtops3a LOC103376588,LOC104957983,LOC101471053,LOC102197526,LOC102311316 coding upstream 4963 24459097 ~ 24465511 (-)
vgll1 NA coding upstream 19041 24473175 ~ 24476728 (-)
adgrg4a NA coding upstream 23431 24477565 ~ 24490143 (-)
fhl1a fhl1 coding upstream 73530 24527664 ~ 24541162 (-)
LOC120566461 NA non-coding downstream 50689 24288149 ~ 24381312 (-)
G107667 NA non-coding downstream 172655 24199499 ~ 24259346 (-)
G107610 NA non-coding downstream 639499 23792054 ~ 23792502 (-)
G107324 atg2a,si:ch73-45o6.2,LOC107660800 non-coding downstream 1168102 23242037 ~ 23263899 (-)
G107282 NA non-coding downstream 1207545 23170148 ~ 23224456 (-)
G107759 NA non-coding upstream 14815 24468949 ~ 24469187 (-)
G107764 map7d3 non-coding upstream 43202 24497336 ~ 24514238 (-)
G107765 NA non-coding upstream 68989 24523123 ~ 24524589 (-)
G107772 NA non-coding upstream 89246 24543380 ~ 24543713 (-)
G107855 taf7l,taf7 non-coding upstream 107069 24561203 ~ 24563631 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other downstream 443100 23884588 ~ 23988901 (-)
rnaseh2c rnaseh2c other downstream 1244943 23184192 ~ 23187058 (-)
trpt1 trpt1,LOC102777684 other downstream 1254975 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other downstream 1297216 23129709 ~ 23134785 (-)
G107235 rom1,LOC103366586,LOC102779683 other downstream 1438772 22990987 ~ 22993229 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other upstream 119307 24573441 ~ 24579099 (-)
trnav-uac_15 NA other upstream 407836 24861970 ~ 24862184 (-)
ndufa1 NA other upstream 809038 25263172 ~ 25264864 (-)
G107989 NA other upstream 825469 25279603 ~ 25288086 (-)
diaph2 NA other upstream 1383196 25837330 ~ 26258199 (-)

Expression


Co-expression Network