G107855 (taf7l,taf7)


Basic Information

Item Value
gene id G107855
gene name taf7l,taf7
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 24561203 ~ 24563631 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU144916
TAACTCTCGAATTTCAATATCTGTTTTTGCCTTAGAAACACAATATTAATCAGCTTTATTACTTTGTGTTTCTGTAGGCCATGTAGTCGAGGTAGCAATACACGACCCTTTAGAACGTGGGTCCTATGACTTACTTATGAAAAACATGTTTCCCTTACCAGAGGACCCATGACCCATCTTGTGTCCCGAGGTGCCAGGTGAGGAGTCCAGGTTGGCCAGAGAGCTGTGCTGATCTGCTTCTTTGGACTCATCTTCTGCTATGATTTCCCACCGGACACTGACAGCGTCAGCGTCTGTGCTCAGCAATCTCTTCACCTCCTTTTCCACATCAGGAGATTCAATGTACTTCTTTTTTGCAGTTTTCCGAAATCTTCTCTTGCGTGTGTTCTTTAGAGGGCAGGTGATGCCGTGGTTCCAAACAAATTTCTTGtccttgtctttgtctttcttctTGCTCTTGGGGTCGGTCCCAGTTGGCTCCTCTAAAGGAGGGTAAAGGTCTCCATCTAGTGTACATACCAGCATCTAACCCATGGATGCAAAACTGATATAAATTACTCTGCATTCTGCTGATTAATGTTGTTGTATTACAGTATTATAACGCACAAGAAAAGCTGAGGCATAATCTtagttttaaatattaaaaaatgtaaaacataccTTTTATTCACAATTGGTATCCTAAACTTAACAGCAAATATGTATCCAATGTTGATAACAACAAATGTATCAAATGAATATCACATCTTCTAATGCAATGGTGCTGCTCTACCTGGGTTTTTAGTCACAATCGTCATCCTAAACTTGAACAAGAAATGTACAATGAAGATGACATCCCACTGCAGTGGTCTACCTGGCAGACATCAGCAGTTTTGTAAAATGTCTTCTTGTCCACCGTTTTCAGAGACTCAATCATACAGGGCAGATCCACCAGTTTGCAGGCCAAAGGGACGCGGTCTACTCTCACTATGCCATGACGACCATCAGCTACAAATAAGAGGGACAACATAATTGATTATGAGTAATATGTGAAACACTGCCATAAGGACACTGCAGTCACAAAACAGAGTACACATGCAGGTGCAAAAC

Function

symbol description
taf7 Predicted to contribute to RNA polymerase II general transcription initiation factor activity. Predicted to be involved in RNA polymerase II preinitiation complex assembly. Predicted to act upstream of or within transcription initiation from RNA polymerase II promoter. Predicted to be located in nucleus. Predicted to be part of transcription factor TFIID complex. Orthologous to human TAF7 (TATA-box binding protein associated factor 7).
taf7l Predicted to contribute to RNA polymerase II general transcription initiation factor activity. Predicted to be involved in RNA polymerase II preinitiation complex assembly. Predicted to act upstream of or within flagellated sperm motility and spermatid development. Predicted to be located in nucleus. Predicted to be part of transcription factor TFIID complex.

NR:

description
PREDICTED: transcription initiation factor TFIID subunit 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144916 True 1089 lncRNA 0.41 4 24561203 24563631

Neighbor

gene id symbol gene type direction distance location
slc9a6a slc9a6 coding downstream 3082 24544010 ~ 24558121 (-)
fhl1a fhl1 coding downstream 20041 24527664 ~ 24541162 (-)
adgrg4a NA coding downstream 71060 24477565 ~ 24490143 (-)
vgll1 NA coding downstream 84475 24473175 ~ 24476728 (-)
tmtops3a LOC103376588,LOC104957983,LOC101471053,LOC102197526,LOC102311316 coding downstream 95692 24459097 ~ 24465511 (-)
drp2 drp2,LOC107724836 coding upstream 19332 24582963 ~ 24789913 (-)
cenpi cenpi coding upstream 227752 24791383 ~ 24805738 (-)
tmem35 tmem35a coding upstream 243654 24807285 ~ 24809933 (-)
arl13a arl13a,LOC102776915,LOC103352893 coding upstream 251454 24815085 ~ 24820493 (-)
cstf2 cstf2 coding upstream 283261 24846892 ~ 24859372 (-)
G107772 NA non-coding downstream 17490 24543380 ~ 24543713 (-)
G107765 NA non-coding downstream 36614 24523123 ~ 24524589 (-)
G107764 map7d3 non-coding downstream 46965 24497336 ~ 24514238 (-)
G107759 NA non-coding downstream 92016 24468949 ~ 24469187 (-)
G107742 NA non-coding downstream 107069 24432001 ~ 24454134 (-)
G107874 xkrx,LOC102776626 non-coding upstream 260450 24824081 ~ 24835348 (-)
G107880 NA non-coding upstream 277196 24840827 ~ 24841052 (-)
G107885 LOC104956976 non-coding upstream 313191 24876822 ~ 24881870 (-)
G107887 NA non-coding upstream 319499 24883130 ~ 24883757 (-)
G107888 bcorl1 non-coding upstream 320369 24884000 ~ 24884256 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other downstream 572302 23884588 ~ 23988901 (-)
rnaseh2c rnaseh2c other downstream 1374145 23184192 ~ 23187058 (-)
trpt1 trpt1,LOC102777684 other downstream 1384177 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other downstream 1426418 23129709 ~ 23134785 (-)
G107235 rom1,LOC103366586,LOC102779683 other downstream 1567974 22990987 ~ 22993229 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other upstream 9810 24573441 ~ 24579099 (-)
trnav-uac_15 NA other upstream 298339 24861970 ~ 24862184 (-)
ndufa1 NA other upstream 699541 25263172 ~ 25264864 (-)
G107989 NA other upstream 715972 25279603 ~ 25288086 (-)
diaph2 NA other upstream 1273699 25837330 ~ 26258199 (-)

Expression


Co-expression Network