ndufa1


Basic Information

Item Value
gene id ndufa1
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 25263172 ~ 25264864 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU145077
TTTTCTTGTACTGTAGCGGTCGTCGAGGGAGTCGACATTTTGTTAGCTTCTTAGCAAAATAAACTGAGTCTTAGGGCAATTTTGTTGTTATCTAAGCGGCTCTCTGTCGCCTAACAGTTACCGGCTGTTATCATGTGGTATGAAATTCTGCCCGGCTTCGCCGTCATGACCGTGTGTTTGATTATTCCTGGCGTCGCCACCGCACAGATCCACAAGTTTACCAACGGAGGAAAGGAAAAGAGAATCGCTCGGTATCCGTGGCAGTGGTATCTGATGGAGAGAGACAAGCGAGTGTCGGGATCAGGACAACACGTTGACTCCAAGGGACTCGAGAACATCCACTGATGACAAAGAATATGAAGACCCTGATGAGAAGAAAGTTGTACATTAAAAGATTATATTTAACATTCAGCTGTTTGTTTTCAGTCTTTTAAGGCAATCCTCCTTGTTATCAAATAAACTGTTCCACACTGGA
>XM_039813625.1
CATTTTCTTGTACTGTAGCGGTCGTCGAGGGAGTCGACATTTTGTTAGCTTCTTAGCAAAATAAACTGAGTCTTAGGGCAATTTTGTTGTTATCTAAGCGGCTCTCTGTCGCCTAACAGTTACCGGCTGTTATCATGTGGTATGAAATTCTGCCCGGCTTCGCCGTCATGACCGTGTGTTTGATTATTCCTGGCGTCGCCACCGCACAGATCCACAAGTTTACCAACGGAGGAAAGGAAAAGAGAATCGCTCGGTATCCGTGGCAGTGGTATCTGATGGAGAGAGACAAGCGAGTGTCGGGATCAGGACAACACGTTGACTCCAAGGGACTCGAGAACATCCACTGATGACAAAGAATATGAAGACCCTGATGAGAAGAAAGTTGTACATTAAAAGATTATATTTAACATTCAGCTGTTTGTTTTCAGTCTTTTAAGGCAATCCTCCTTGTTATCAAATAAACTGTTCCACACTGGAAACCTTC

Function

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1-like

GO: NA

KEGG:

id description
K03945 NDUFA1; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1

RNA

RNA id representative length rna type GC content exon number start site end site
TU145077 False 475 lncRNA 0.44 3 25263179 25264862
XM_039813625.1 True 484 mRNA 0.44 3 25263172 25264864

Neighbor

gene id symbol gene type direction distance location
zbtb33 zbtb33 coding downstream 5540 25252765 ~ 25257632 (-)
atp1b4 atp1b4 coding downstream 24558 25233186 ~ 25238614 (-)
mcts1 mcts1 coding downstream 62657 25198318 ~ 25200515 (-)
urp1 NA coding downstream 73723 25186589 ~ 25189449 (-)
si:ch73-335m24.2 LOC100690735,LOC102798665 coding downstream 90332 25167221 ~ 25172840 (-)
sowahd NA coding upstream 17937 25282801 ~ 25284565 (-)
pttg1 NA coding upstream 19841 25284705 ~ 25290134 (-)
ube2a ube2a,Ube2a,ube2al,LOC103150206 coding upstream 51434 25316298 ~ 25320522 (-)
tnmd tnmd coding upstream 101306 25366170 ~ 25432527 (-)
zgc:101583 LOC103366979,LOC102198838,LOC100710928,LOC102783729 coding upstream 1214027 26478891 ~ 26483763 (-)
G107923 NA non-coding downstream 76694 25180938 ~ 25186478 (-)
G107907 NA non-coding downstream 189340 25073181 ~ 25073832 (-)
G107903 NA non-coding downstream 282375 24977124 ~ 24980797 (-)
G107890 NA non-coding downstream 372456 24890301 ~ 24890716 (-)
G107889 NA non-coding downstream 377745 24885009 ~ 24885427 (-)
G107992 sept6 non-coding upstream 26753 25291617 ~ 25297266 (-)
G108031 NA non-coding upstream 383670 25648534 ~ 25648780 (-)
G108036 NA non-coding upstream 415228 25680092 ~ 25680437 (-)
G108040 NA non-coding upstream 509718 25774582 ~ 25774823 (-)
G108082 NA non-coding upstream 1186946 26451810 ~ 26452058 (-)
trnav-uac_15 NA other downstream 400988 24861970 ~ 24862184 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other downstream 684073 24573441 ~ 24579099 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other downstream 1274271 23884588 ~ 23988901 (-)
rnaseh2c rnaseh2c other downstream 2076114 23184192 ~ 23187058 (-)
trpt1 trpt1,LOC102777684 other downstream 2086146 23092565 ~ 23177026 (-)
G107989 NA other upstream 14739 25279603 ~ 25288086 (-)
diaph2 NA other upstream 572466 25837330 ~ 26258199 (-)
rpl36a LOC106604455,LOC100304549,LOC100219516 other upstream 1193131 26457995 ~ 26460732 (-)
G108181 LOC103390578 other upstream 1724400 26989264 ~ 27001011 (-)
G108191 NA other upstream 1800554 27065418 ~ 27065947 (-)

Expression


Co-expression Network