G108039


Basic Information

Item Value
gene id G108039
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 25774521 ~ 25774788 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU145180
cggagggtcgctggttcaagtcccagtacggaccgaagtacagagtgtggattggtagctggagagatgccagttcacctcctgggcactgccaggtgctcttgagcaaggcaccgtacccccCAACCAGCTCAgggcgctggtccagcactggcagcccactcactctgacatctctccatttgtgcatgaataggtcctgagcatgtctgtgtgtatttcaggcctgtgtgtagtgatttctaacagagtgtaaattgtaatttcc

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04724 Glutamatergic synapse
ko04713 Circadian entrainment
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU145180 True 268 lncRNA 0.54 1 25774521 25774788

Neighbor

gene id symbol gene type direction distance location
pcdh19 pcdh19 coding upstream 126320 25594313 ~ 25648201 (+)
elf1 LOC104965894,LOC103353227,LOC102314295,LOC100712278 coding upstream 411272 25321527 ~ 25363249 (+)
trnae-uuc_61 NA coding upstream 453225 25321225 ~ 25321296 (+)
nkrf nkrf coding upstream 459090 25311039 ~ 25315431 (+)
upf3b upf3b coding upstream 505291 25265515 ~ 25269230 (+)
glra4a LOC106949970,LOC101466695,LOC106920031,LOC106514543,LOC108231179,LOC103151720,LOC100711741,LOC103353264,LOC107377714 coding downstream 583014 26357802 ~ 26418964 (+)
gla gla coding downstream 676996 26451784 ~ 26457912 (+)
mars2 mars2 coding downstream 708907 26483695 ~ 26486831 (+)
LOC120566768 enox2,LOC101473670,LOC100709872,LOC102784575,LOC102307254 coding downstream 1069899 26844687 ~ 27069215 (+)
LOC120567492 NA coding downstream 1365548 27140336 ~ 27140454 (+)
G108037 NA non-coding upstream 81106 25693107 ~ 25693415 (+)
LOC120566339 NA non-coding upstream 121859 25650715 ~ 25652662 (+)
G108030 NA non-coding upstream 125719 25648534 ~ 25648802 (+)
G108020 NA non-coding upstream 275655 25498616 ~ 25498866 (+)
G107985 tnmd non-coding upstream 379763 25380713 ~ 25394758 (+)
G108043 NA non-coding downstream 62575 25837363 ~ 25839355 (+)
G108062 NA non-coding downstream 498800 26273588 ~ 26273788 (+)
G108066 LOC100304549,LOC100219516,LOC106514001 non-coding downstream 684252 26459040 ~ 26460626 (+)
G108094 NA non-coding downstream 717584 26492372 ~ 26492997 (+)
G108163 NA non-coding downstream 1165139 26939927 ~ 26940175 (+)
sept6 sept6,LOC106945475 other upstream 464303 25291607 ~ 25310218 (+)
rpl39 NA other upstream 492314 25279568 ~ 25282207 (+)
LOC120567498 NA other upstream 493441 25280948 ~ 25281080 (+)
apln NA other upstream 677498 25073213 ~ 25097023 (+)
nox1 nox1 other upstream 927628 24840186 ~ 24846893 (+)
btk btk other downstream 686500 26461288 ~ 26476570 (+)
timm8a timm8a other downstream 702008 26476796 ~ 26479297 (+)
grxcr1a grxcr1,si:dkey-109l4.6,LOC102787492,LOC106600617,LOC107601454 other downstream 1612858 27387646 ~ 27393621 (+)
LOC120566985 NA other downstream 2201539 27976327 ~ 28046891 (+)
fgfrl1a fgfrl1,LOC104949359 other downstream 2708889 28483677 ~ 28558216 (+)

Expression


Co-expression Network