G108600


Basic Information

Item Value
gene id G108600
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 29723824 ~ 29776421 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU145917
GCACTCTTTGTTCATACGTTAAGTTGTTCAGCAACAATTGTTTTTGACATTGATACAGTGCAAATGCACAATAGCACAACAGACACCATTAAGGATACATACTATTTTTCAAAGTCAATACAGcatgtttgaatttttttttcttttgctaaacataaaaatgtttgtCCTCAATGTAATCCAAAAGACCAGTTTTCTTCACTTGTAGGGGGCCCTTTTAACAGAGAGGCGTTTGGTAATCAATGGCAAGTCATTTTTCCAAGTGTGGTCGGCAACTTCTGCATGGTCATGACAAGTGGTGAAGCAGGGCACTGTCCGCATCTGTTTCCCATCATGCTAAGAGCACTGTGATCATCTAAGTCAGTCAGTCCAATCAGCttcatttgtattttaatcAACTATGCGGCCGTACTGGATGAGTTTCAGCCATACCGTAAACCGGTGCTGATGTTAAACACGTCTACTTTGTCTTGATATGCATATTATATTAAGAAAGAGATAACCTAACACCTGAGAAAATATCGCATTTTGCAATGTAAGACACAGAAGATACAGTGCCGTTCACCCCATCAGTTCACATCAACCACCACCACTCACCAGTGTTTCAAACTTTTTCTTAAAACCGAtcaaaacaaatcaacaaacaCTGACAACAGACGGACAAAAACATACTCCGATGGTTCAAGTCAACGCTgactccatccatcttcatagTCAATGCTgactccatccatcttcatatGCACCAATTAAATTATTTGAATATCAAGTAAACATatgagttttttttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145917 True 799 lncRNA 0.38 2 29723824 29776421

Neighbor

gene id symbol gene type direction distance location
gar1 gar1 coding downstream 192166 29528342 ~ 29531658 (-)
LOC120567329 LOC107095807,LOC107379637,LOC102193053,LOC103355614,LOC108236668 coding downstream 195832 29523571 ~ 29527992 (-)
eif4ea LOC102291913,LOC100695556,LOC103355613,LOC102778934,LOC108236682 coding downstream 204561 29511696 ~ 29519263 (-)
lingo2 lingo2,LOC103356499 coding downstream 488225 28989623 ~ 29235599 (-)
LOC120566377 ctbp1,LOC100694320,LOC101482142 coding downstream 1070617 28623299 ~ 28653207 (-)
egf egf coding upstream 5482 29781903 ~ 29808038 (-)
lrit3a lrit3,LOC100696521 coding upstream 34701 29811122 ~ 29818291 (-)
gpm6aa gpm6a,LOC103355621,LOC104917912 coding upstream 43368 29819789 ~ 29841438 (-)
spata4 NA coding upstream 71489 29847910 ~ 29852684 (-)
asb5a asb5,LOC103355623,LOC101464329,LOC100697054,LOC107095814 coding upstream 76408 29852829 ~ 29859112 (-)
G108560 NA non-coding downstream 449870 29273594 ~ 29273954 (-)
LOC120567081 NA non-coding downstream 794919 28833175 ~ 28928905 (-)
G108524 LOC104954097 non-coding downstream 1042725 28678279 ~ 28681099 (-)
LOC120566386 NA non-coding downstream 1061592 28658024 ~ 28662232 (-)
G108476 NA non-coding downstream 1165621 28556936 ~ 28558203 (-)
G108702 NA non-coding upstream 499443 30275864 ~ 30282627 (-)
G108718 NA non-coding upstream 611100 30387521 ~ 30387854 (-)
G108722 NA non-coding upstream 626239 30402660 ~ 30403036 (-)
G108772 rapgef2 non-coding upstream 876449 30652870 ~ 30654526 (-)
G108785 NA non-coding upstream 957138 30733559 ~ 30733770 (-)
cxcl14 cxcl14 other downstream 915830 28797298 ~ 28807994 (-)
fam13b fam13b,LOC102777128 other downstream 928316 28714863 ~ 28795508 (-)
LOC120566547 NA other downstream 1685124 28024570 ~ 28038700 (-)
G108433 neto1,LOC101071133 other downstream 1700595 28021737 ~ 28023229 (-)
LOC120566991 NA other downstream 1768130 27952256 ~ 27955694 (-)
gask1b fam198b,LOC102776406 other upstream 570557 30346978 ~ 30356856 (-)
G108777 rapgef2 other upstream 884491 30660912 ~ 30661623 (-)
G108781 rapgef2 other upstream 893110 30669531 ~ 30670849 (-)
LOC120566409 limch1 other upstream 1608669 31385090 ~ 31423481 (-)
LOC120566557 limch1 other upstream 1643458 31419879 ~ 31485976 (-)

Expression


Co-expression Network