gask1b (fam198b,LOC102776406)


Basic Information

Item Value
gene id gask1b
gene name fam198b,LOC102776406
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 30346978 ~ 30356856 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU146077
TTTCGGATGTTGTGCGTTCCTCCCTGGTTTGAGTTTGGCTAAAAAAAGACACTCAACCATGATATTAACATAAGTTCTAATGGGGAAGTCTCGCGTTCACTGGCTGCGCTTCCCTTTTCTAAGATTGACCAGCAGCTTTCGAAGATGGCCAGCCCTGTCCAGTGGTGTCATGGGATGCATCTCTCTACCCAGAAGGCCTTGCTGAAGGCCGGTCGACCGTGAGGTTAACATGGGGGGAGTACCAGAACTCCCTGAAACAGAAGTGTTGGCATAAAAACATCAGCCCAAAGCCTGACTCCGGATGCTTCACAGTTCATCACTATGAGTGGAGTAAACTGGCTCTGTTTGACTTCTTGTTACAGATTCACAACCGTCTGGATCAGAGTTGCTGTGGATTCAGGCCCAGGCAGGAGGATGTTTGTGTGGAACTCGGCCACCATGCTCTATGTGGGGACCCAAACCACATACaactgacaaacatcatccacaGGGATCAGGACCCCAGACACCTGGTCTTCACCATCAACAAGGGGTTCTTCGACCGCAATGAGGACAACTTGGACTTCAGGCTCCTGGAAGGAATCAAAGAGCTGCCAGAGCAGGCAGTGTCCGTGCTGAAGAGCAAGAGGCTGAGGGAGAAGCTCCTCCAGTCTCTTTTCCTGGACCAGATATACTGGGAGAGCCAGGGCGGCCGGCAGGGCATCGACAAGCTGATCGATGTAATTGAGAGGCGGGCCAAAGTCCTCCTCACCTACATCAATGCTCATGGGATCAAAGTCATCAAAATGCACGTATGATGCGAGTCACATCAATCAAGTGGCGAAATTACTGAGATGTGCCTTCAATGCGTCCCTTCAGAATGTCCCTTTACAAGCCACTGGAACTTTATCCATTTACATTGGCTACATTTTGTAAAGTGGCTCTGGGAAAAGAAAAGCTATCTAATATCTAAAAAGGATGTGTGCCAATGATTTAATATCAATTTATATCACAAGAGTGTGAGAGCATATGGTGTTGAGTAAAACTGTCCCTACTCTTCAGGATCATACAATTTTAATGTGAAATATTGGAAAAATGAAACAAGATTATTGAGAAATTACAGATTTTTCTTTATACATTTGTAAAAGATAACAATTATCATATTGCTAATGAATGActaattataaattaaattccCCACTATAATTTTTAAAACAGCATAAGTTGTGCTGTTGTTAACTCTTTGATAGAAAGCCATTCAAGTCATTTGCGGTTACGGAAACCTATCATTTGCATATACTAAGAGAGGCTAATTTGACATTTCAAATTAGCCTAACTTTTACTAAATGAAAatacttccttcttcatttaTTTCTTCCCTACAGGTGAATACACTGCCATCATTATGTACAGATTAGAATATGCTGCAGTTATAACTTTCGCTTCCAGTGTAATTTGCATTGTGTATGAACGGAATGCACTAAATGATACGTTATTTTCTTCTCTGCTGGTTAAGTGTGTTTCTGGAACTAAGATGTTCTTAGCCTATAGCTAACAAGCCACAACCCATCCAGTTGGCTTGTTTGTGGTCACACGTTATACACTGAATACAATATTTCCAttctaataaattatttaatcCACAGTcttaaacatttttctttttacaaaactCCCAAGAAATGACACCATTTTATAAATATA
>XM_039812540.1
CTTTCGGATGTTGTGCGTTCCTCCCTGGTTTGAGTTTGGCTAAAAAAAGACACTCAACCATGATATTAACATAAGTTCTAATGGGGAAGTCTCGCGTTCACTGGCTGCGCTTCCCTTTTCTAAGATTGACCAGCAGCTTTCGAAGGTGCCCTCTTTCAATAAGGAGTTTGATAATTGCGAGCGTGTGTGTTGTCCATTTGTTGTTGGTGGTTTCACATTTTGGATACTCGCAGCACCAACGGGAACGAGGGATTGACAAAGACAAGTACCGAAACGCCCGTGGATTGTATAATTTGGATATTAGTGATGCGCTGCCAGACTCTGTGGATTTGCAGACCGGTGCGAGCTTTGTGGTCCCGACACGGTACAACGTGGTGTATATAACGCTAAAGTCTAAGCGCCTGAAACCAGCACATATTCGGGGTACAATCAGACCAAAACTGAGGAGAAAAGTAAGAAGAAACAATGAGGCTAATTCCGCTTTTACGCAGTACAAACTTGGAACTTTGGAGCGAGACGCGGTCCAAATTAAGCGTAATTTTGCATCCAAGACTTCCTTAGGAGAACCCAGGGATGTTTATTATAAATCTTTAGCTATACCCCATACATTTCCTACGGATACACAGATAGACTCTCACATAAGTTCTATCCGAATTTACAGTCAGAGGGCACCGCCATGGATCAGCCCACAGGACGTGGAAGCCATGCGCTTTCTTGCGGATGCCAACGTTTTGCGCATCAAAGAAGTTTATCGCGGAGACTCTCCGACACTTCTGATATTTGAGGGCGAGACAAGCGTCCCAatgaaaaaccaaaaacacacacaacggaGCAATGTATGTGGAGGGCAGTGTGGAGTAATCAACAGCCCCGTGGACACCACTGAGGTCTTTGCTTTCCATCTGGACAGGGTGCTGGGGCTCAATAGGACATTGCCAGCTGTGAGCAGAAAGTTTAGCTTTTTACACGATGGCCAGCCCTGTCCAGTGGTGTCATGGGATGCATCTCTCTACCCAGAAGGCCTTGCTGAAGGCCGGTCGACCGTGAGGTTAACATGGGGGGAGTACCAGAACTCCCTGAAACAGAAGTGTTGGCATAAAAACATCAGCCCAAAGCCTGACTCCGGATGCTTCACAGTTCATCACTATGAGTGGAGTAAACTGGCTCTGTTTGACTTCTTGTTACAGATTCACAACCGTCTGGATCAGAGTTGCTGTGGATTCAGGCCCAGGCAGGAGGATGTTTGTGTGGAACTCGGCCACCATGCTCTATGTGGGGACCCAAACCACATACaactgacaaacatcatccacaGGGATCAGGACCCCAGACACCTGGTCTTCACCATCAACAAGGGGTTCTTCGACCGCAATGAGGACAACTTGGACTTCAGGCTCCTGGAAGGAATCAAAGAGCTGCCAGAGCAGGCAGTGTCCGTGCTGAAGAGCAAGAGGCTGAGGGAGAAGCTCCTCCAGTCTCTTTTCCTGGACCAGATATACTGGGAGAGCCAGGGCGGCCGGCAGGGCATCGACAAGCTGATCGATGTAATTGAGAGGCGGGCCAAAGTCCTCCTCACCTACATCAATGCTCATGGGATCAAAGTCATCAAAATGCACGTATGATGCGAGTCACATCAATCAAGTGGCGAAATTACTGAGATGTGCCTTCAATGCGTCCCTTCAGAATGTCCCTTTACAAGCCACTGGAACTTTATCCATTTACATTGGCTACATTTTGTAAAGTGGCTCTGGGAAAAGAAAAGCTATCTAATATCTAAAAAGGATGTGTGCCAATGATTTAATATCAATTTATATCACAAGAGTGTGAGAGCATATGGTGTTGAGTAAAACTGTCCCTACTCTTCAGGATCATACAATTTTAATGTGAAATATTGGAAAAATGAAACAAGATTATTGAGAAATTACAGATTTTTCTTTATACATTTGTAAAAGATAACAATTATCATATTGCTAATGAATGActaattataaattaaattccCCACTATAATTTTTAAAACAGCATAAGTTGTGCTGTTGTTAACTCTTTGATAGAAAGCCATTCAAGTCATTTGCGGTTACGGAAACCTATCATTTGCATATACTAAGAGAGGCTAATTTGACATTTCAAATTAGCCTAACTTTTACTAAATGAAAatacttccttcttcatttaTTTCTTCCCTACAGGTGAATACACTGCCATCATTATGTACAGATTAGAATATGCTGCAGTTATAACTTTCGCTTCCAGTGTAATTTGCATTGTGTATGAACGGAATGCACTAAATGATACGTTATTTTCTTCTCTGCTGGTTAAGTGTGTTTCTGGAACTAAGATGTTCTTAGCCTATAGCTAACAAGCCACAACCCATCCAGTTGGCTTGTTTGTGGTCACACGTTATACACTGAATACAATATTTCCAttctaataaattatttaatcCACA

Function

NR:

description
protein FAM198B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146077 False 1683 lncRNA 0.41 4 30346978 30356855
XM_039812540.1 True 2449 mRNA 0.44 4 30347037 30356856

Neighbor

gene id symbol gene type direction distance location
pdgfc pdgfc coding downstream 162286 30139809 ~ 30184692 (-)
neil3 neil3 coding downstream 244059 30090948 ~ 30102919 (-)
si:dkey-237h12.3 tenm3 coding downstream 318840 29881190 ~ 30028138 (-)
tdo2a tdo2 coding downstream 472330 29867532 ~ 29874648 (-)
asb5a asb5,LOC103355623,LOC101464329,LOC100697054,LOC107095814 coding downstream 487866 29852829 ~ 29859112 (-)
ppid ppid coding upstream 180971 30537827 ~ 30548407 (-)
LOC120566929 clg2h4orf45,LOC104948239,LOC102200624,LOC101472142 coding upstream 196320 30553176 ~ 30555189 (-)
fstl5 NA coding upstream 442381 30799237 ~ 30974285 (-)
anxa5a anxa5 coding upstream 914370 31271226 ~ 31300495 (-)
ccna2 ccna2,LOC101477005 coding upstream 952689 31309545 ~ 31313167 (-)
G108702 NA non-coding downstream 64351 30275864 ~ 30282627 (-)
G108600 NA non-coding downstream 570557 29723824 ~ 29776421 (-)
LOC120567321 NA non-coding downstream 596442 29553435 ~ 29750536 (-)
G108560 NA non-coding downstream 1073024 29273594 ~ 29273954 (-)
LOC120567081 NA non-coding downstream 1418073 28833175 ~ 28928905 (-)
G108718 NA non-coding upstream 30665 30387521 ~ 30387854 (-)
G108722 NA non-coding upstream 45804 30402660 ~ 30403036 (-)
G108772 rapgef2 non-coding upstream 296014 30652870 ~ 30654526 (-)
G108785 NA non-coding upstream 376703 30733559 ~ 30733770 (-)
G108810 qdpr non-coding upstream 645792 31002648 ~ 31004486 (-)
cxcl14 cxcl14 other downstream 1538984 28797298 ~ 28807994 (-)
fam13b fam13b,LOC102777128 other downstream 1551470 28714863 ~ 28795508 (-)
LOC120566547 NA other downstream 2308278 28024570 ~ 28038700 (-)
G108433 neto1,LOC101071133 other downstream 2323749 28021737 ~ 28023229 (-)
LOC120566991 NA other downstream 2391284 27952256 ~ 27955694 (-)
G108777 rapgef2 other upstream 304056 30660912 ~ 30661623 (-)
G108781 rapgef2 other upstream 312675 30669531 ~ 30670849 (-)
LOC120566409 limch1 other upstream 1028234 31385090 ~ 31423481 (-)
LOC120566557 limch1 other upstream 1063023 31419879 ~ 31485976 (-)
tlx2 tlx2,LOC107396138 other upstream 1482686 31839542 ~ 31851757 (-)

Expression


Co-expression Network