Gene
RNA
| Item | Value |
|---|---|
| gene id | G108718 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053121.1 |
| NCBI id | CM020918.1 |
| chromosome length | 40300294 |
| location | 30387521 ~ 30387854 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016071 | mRNA metabolic process | biological_process |
| GO:0006376 | mRNA splice site selection | biological_process |
| GO:0000375 | RNA splicing, via transesterification reactions | biological_process |
| GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | biological_process |
| GO:0006397 | mRNA processing | biological_process |
| GO:0000398 | mRNA splicing, via spliceosome | biological_process |
| GO:0000245 | spliceosomal complex assembly | biological_process |
| GO:0008380 | RNA splicing | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU146087 | True | 334 | lncRNA | 0.40 | 1 | 30387521 | 30387854 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pdgfc | pdgfc | coding | downstream | 202829 | 30139809 ~ 30184692 (-) |
| neil3 | neil3 | coding | downstream | 284602 | 30090948 ~ 30102919 (-) |
| si:dkey-237h12.3 | tenm3 | coding | downstream | 359383 | 29881190 ~ 30028138 (-) |
| tdo2a | tdo2 | coding | downstream | 512873 | 29867532 ~ 29874648 (-) |
| asb5a | asb5,LOC103355623,LOC101464329,LOC100697054,LOC107095814 | coding | downstream | 528409 | 29852829 ~ 29859112 (-) |
| ppid | ppid | coding | upstream | 149973 | 30537827 ~ 30548407 (-) |
| LOC120566929 | clg2h4orf45,LOC104948239,LOC102200624,LOC101472142 | coding | upstream | 165322 | 30553176 ~ 30555189 (-) |
| fstl5 | NA | coding | upstream | 411383 | 30799237 ~ 30974285 (-) |
| anxa5a | anxa5 | coding | upstream | 883372 | 31271226 ~ 31300495 (-) |
| ccna2 | ccna2,LOC101477005 | coding | upstream | 921691 | 31309545 ~ 31313167 (-) |
| G108702 | NA | non-coding | downstream | 104894 | 30275864 ~ 30282627 (-) |
| G108600 | NA | non-coding | downstream | 611100 | 29723824 ~ 29776421 (-) |
| LOC120567321 | NA | non-coding | downstream | 636985 | 29553435 ~ 29750536 (-) |
| G108560 | NA | non-coding | downstream | 1113567 | 29273594 ~ 29273954 (-) |
| LOC120567081 | NA | non-coding | downstream | 1458616 | 28833175 ~ 28928905 (-) |
| G108722 | NA | non-coding | upstream | 14806 | 30402660 ~ 30403036 (-) |
| G108772 | rapgef2 | non-coding | upstream | 265016 | 30652870 ~ 30654526 (-) |
| G108785 | NA | non-coding | upstream | 345705 | 30733559 ~ 30733770 (-) |
| G108810 | qdpr | non-coding | upstream | 614794 | 31002648 ~ 31004486 (-) |
| G108828 | NA | non-coding | upstream | 742409 | 31130263 ~ 31131659 (-) |
| gask1b | fam198b,LOC102776406 | other | downstream | 30665 | 30346978 ~ 30356856 (-) |
| cxcl14 | cxcl14 | other | downstream | 1579527 | 28797298 ~ 28807994 (-) |
| fam13b | fam13b,LOC102777128 | other | downstream | 1592013 | 28714863 ~ 28795508 (-) |
| LOC120566547 | NA | other | downstream | 2348821 | 28024570 ~ 28038700 (-) |
| G108433 | neto1,LOC101071133 | other | downstream | 2364292 | 28021737 ~ 28023229 (-) |
| G108777 | rapgef2 | other | upstream | 273058 | 30660912 ~ 30661623 (-) |
| G108781 | rapgef2 | other | upstream | 281677 | 30669531 ~ 30670849 (-) |
| LOC120566409 | limch1 | other | upstream | 997236 | 31385090 ~ 31423481 (-) |
| LOC120566557 | limch1 | other | upstream | 1032025 | 31419879 ~ 31485976 (-) |
| tlx2 | tlx2,LOC107396138 | other | upstream | 1451688 | 31839542 ~ 31851757 (-) |
