Gene
RNA
| Item | Value |
|---|---|
| gene id | G108772 |
| gene name | rapgef2 |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053121.1 |
| NCBI id | CM020918.1 |
| chromosome length | 40300294 |
| location | 30652870 ~ 30654526 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| rapgef2 | Enables several functions, including anion binding activity; beta-1 adrenergic receptor binding activity; and protein domain specific binding activity. Involved in several processes, including G protein-coupled receptor signaling pathway; positive regulation of intracellular signal transduction; and response to purine-containing compound. Located in several cellular components, including apical plasma membrane; bicellular tight junction; and cytoplasmic vesicle. Implicated in familial adult myoclonic epilepsy 7. |
| description |
|---|
| PREDICTED: rap guanine nucleotide exchange factor 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU146159 | True | 306 | lncRNA | 0.53 | 3 | 30652870 | 30654526 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120566929 | clg2h4orf45,LOC104948239,LOC102200624,LOC101472142 | coding | downstream | 97681 | 30553176 ~ 30555189 (-) |
| ppid | ppid | coding | downstream | 104463 | 30537827 ~ 30548407 (-) |
| pdgfc | pdgfc | coding | downstream | 468178 | 30139809 ~ 30184692 (-) |
| neil3 | neil3 | coding | downstream | 549951 | 30090948 ~ 30102919 (-) |
| si:dkey-237h12.3 | tenm3 | coding | downstream | 624732 | 29881190 ~ 30028138 (-) |
| fstl5 | NA | coding | upstream | 144711 | 30799237 ~ 30974285 (-) |
| anxa5a | anxa5 | coding | upstream | 616700 | 31271226 ~ 31300495 (-) |
| ccna2 | ccna2,LOC101477005 | coding | upstream | 655019 | 31309545 ~ 31313167 (-) |
| bbs7 | bbs7,LOC102788539 | coding | upstream | 660596 | 31315122 ~ 31321212 (-) |
| tmem33 | tmem33 | coding | upstream | 667839 | 31322365 ~ 31332549 (-) |
| G108722 | NA | non-coding | downstream | 249834 | 30402660 ~ 30403036 (-) |
| G108718 | NA | non-coding | downstream | 265016 | 30387521 ~ 30387854 (-) |
| G108702 | NA | non-coding | downstream | 370243 | 30275864 ~ 30282627 (-) |
| G108600 | NA | non-coding | downstream | 876449 | 29723824 ~ 29776421 (-) |
| LOC120567321 | NA | non-coding | downstream | 902334 | 29553435 ~ 29750536 (-) |
| G108785 | NA | non-coding | upstream | 79033 | 30733559 ~ 30733770 (-) |
| G108810 | qdpr | non-coding | upstream | 348122 | 31002648 ~ 31004486 (-) |
| G108828 | NA | non-coding | upstream | 475737 | 31130263 ~ 31131659 (-) |
| G108840 | NA | non-coding | upstream | 520337 | 31174863 ~ 31175459 (-) |
| G108854 | LOC102777869,LOC101473425,LOC102203600 | non-coding | upstream | 565566 | 31220092 ~ 31235817 (-) |
| gask1b | fam198b,LOC102776406 | other | downstream | 296014 | 30346978 ~ 30356856 (-) |
| cxcl14 | cxcl14 | other | downstream | 1844876 | 28797298 ~ 28807994 (-) |
| fam13b | fam13b,LOC102777128 | other | downstream | 1857362 | 28714863 ~ 28795508 (-) |
| LOC120566547 | NA | other | downstream | 2614170 | 28024570 ~ 28038700 (-) |
| G108433 | neto1,LOC101071133 | other | downstream | 2629641 | 28021737 ~ 28023229 (-) |
| G108777 | rapgef2 | other | upstream | 6386 | 30660912 ~ 30661623 (-) |
| G108781 | rapgef2 | other | upstream | 15005 | 30669531 ~ 30670849 (-) |
| LOC120566409 | limch1 | other | upstream | 730564 | 31385090 ~ 31423481 (-) |
| LOC120566557 | limch1 | other | upstream | 765353 | 31419879 ~ 31485976 (-) |
| tlx2 | tlx2,LOC107396138 | other | upstream | 1185016 | 31839542 ~ 31851757 (-) |
