Gene
RNA
| Item | Value |
|---|---|
| gene id | G108781 |
| gene name | rapgef2 |
| gene type | unknown |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053121.1 |
| NCBI id | CM020918.1 |
| chromosome length | 40300294 |
| location | 30669531 ~ 30670849 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| rapgef2 | Enables several functions, including anion binding activity; beta-1 adrenergic receptor binding activity; and protein domain specific binding activity. Involved in several processes, including G protein-coupled receptor signaling pathway; positive regulation of intracellular signal transduction; and response to purine-containing compound. Located in several cellular components, including apical plasma membrane; bicellular tight junction; and cytoplasmic vesicle. Implicated in familial adult myoclonic epilepsy 7. |
| description |
|---|
| PREDICTED: rap guanine nucleotide exchange factor 2 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU146169 | True | 917 | TUCP | 0.64 | 2 | 30669531 | 30670849 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120566929 | clg2h4orf45,LOC104948239,LOC102200624,LOC101472142 | coding | downstream | 114342 | 30553176 ~ 30555189 (-) |
| ppid | ppid | coding | downstream | 121124 | 30537827 ~ 30548407 (-) |
| pdgfc | pdgfc | coding | downstream | 484839 | 30139809 ~ 30184692 (-) |
| neil3 | neil3 | coding | downstream | 566612 | 30090948 ~ 30102919 (-) |
| si:dkey-237h12.3 | tenm3 | coding | downstream | 641393 | 29881190 ~ 30028138 (-) |
| fstl5 | NA | coding | upstream | 128388 | 30799237 ~ 30974285 (-) |
| anxa5a | anxa5 | coding | upstream | 600377 | 31271226 ~ 31300495 (-) |
| ccna2 | ccna2,LOC101477005 | coding | upstream | 638696 | 31309545 ~ 31313167 (-) |
| bbs7 | bbs7,LOC102788539 | coding | upstream | 644273 | 31315122 ~ 31321212 (-) |
| tmem33 | tmem33 | coding | upstream | 651516 | 31322365 ~ 31332549 (-) |
| G108772 | rapgef2 | non-coding | downstream | 15005 | 30652870 ~ 30654526 (-) |
| G108722 | NA | non-coding | downstream | 266495 | 30402660 ~ 30403036 (-) |
| G108718 | NA | non-coding | downstream | 281677 | 30387521 ~ 30387854 (-) |
| G108702 | NA | non-coding | downstream | 386904 | 30275864 ~ 30282627 (-) |
| G108600 | NA | non-coding | downstream | 893110 | 29723824 ~ 29776421 (-) |
| G108785 | NA | non-coding | upstream | 62710 | 30733559 ~ 30733770 (-) |
| G108810 | qdpr | non-coding | upstream | 331799 | 31002648 ~ 31004486 (-) |
| G108828 | NA | non-coding | upstream | 459414 | 31130263 ~ 31131659 (-) |
| G108840 | NA | non-coding | upstream | 504014 | 31174863 ~ 31175459 (-) |
| G108854 | LOC102777869,LOC101473425,LOC102203600 | non-coding | upstream | 549243 | 31220092 ~ 31235817 (-) |
| G108777 | rapgef2 | other | downstream | 7908 | 30660912 ~ 30661623 (-) |
| gask1b | fam198b,LOC102776406 | other | downstream | 312675 | 30346978 ~ 30356856 (-) |
| cxcl14 | cxcl14 | other | downstream | 1861537 | 28797298 ~ 28807994 (-) |
| fam13b | fam13b,LOC102777128 | other | downstream | 1874023 | 28714863 ~ 28795508 (-) |
| LOC120566547 | NA | other | downstream | 2630831 | 28024570 ~ 28038700 (-) |
| LOC120566409 | limch1 | other | upstream | 714241 | 31385090 ~ 31423481 (-) |
| LOC120566557 | limch1 | other | upstream | 749030 | 31419879 ~ 31485976 (-) |
| tlx2 | tlx2,LOC107396138 | other | upstream | 1168693 | 31839542 ~ 31851757 (-) |
| hopx | hopx | other | upstream | 2120532 | 32791381 ~ 32893558 (-) |
| slc49a3 | mfsd7 | other | upstream | 2291188 | 32962037 ~ 32979661 (-) |
