LOC120566236


Basic Information

Item Value
gene id LOC120566236
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 23627091 ~ 23630156 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812539.1
CGCAATCTGATTGCTTTGTTTTCCTCTGCAGAGCTCGAGCCCTCAGACAGAAGCCCCAAAAGAAATCATGACACCATCTCTACATCCAGAACTGACAGCTCTGCCTTTAGAAAACCCTGGTGCCTCTACTGAGAAGGGCAATGATGTTCCCAGTGCTTCAGTCCCAACTATTGTTATCTCCCAATATAATTCTTCTTCAGAACCGCCTGAGAAAGCAGAAATCGAAAAGGAGCCGCAGTCTGCTGCTAACTCGGACCCTTCAAACGAAAACTGTTCCCAAGACATACCAGAAGACTCTGATAATCCCTTAACCTCTCactttaaaattattttcaaaGGACTGACCCGTTCCAGGTCACAAGAGTCTCTGGTCACGACAAGGAACAGCAGAGATGAAGACCCACCTGATTCAGACTCCACGCCACACAACAGCCAAATCAGAGGCGTGCAGGGGGAGATCGCAGAAGGCCCGTCTTTGCTTCATTCCAGTGTAAGGTCAAATAAAAAGGAGAACATATGTTTCAAGATGTCAAGTGGAGTGAACAAGGCTAAAGGGAAGGATCAGGGCACTTCACCGAGAGGGGAGAACTCCCAGTGTCGGAAGAGCCAAGTCGGCAGGGAGCAGCTGGAGGCGACCAAAGCCATATTTGATCTGCTGAAAGAAATATCTGGGAACTCCATCCTTGTAAACATATTTGATGCCATTTTGAAACCTGTTATGCCCATCCTAAAAAAAAAAGTGAACTCTTTCCTAAACAAGATGAACCCGACAGAAGTGCAGATAGCCGCATACATCGACACCCTGCGTGAAAAACAGTGGCCAGATTTTCAACCcgcagctcctcctcctcctcctcctcctcctcgcacTGATGAGGAGAAGACCAAGACCAGGGATAGAGCACACAATCTAATCAATGCCAGATATTCAAACTATCTTATCCTGAAGAAGACAGATATGGAgtctgtttttaatattttccaggacggtgaaaaaaacaaaatgctggTATATATGCTCCTGTCATTCCTATTAAGGGAATTTTTTCCCAATGAGCATTCCCTAAATGTGAGCGCCGCTGCCCTGCAGAAAGTGACCAACTCCACCAGCTGATCTGAATCcttgattgtgtttttaattgtacttttttaaaacataaaattatttattaaacatctGAAAATGCCTTGGAATATTTGTGGCAAACATACTGGGAACATTTTGtgaatttcctttttattttgtatattgaACTTTGTAAGTTATAAACCCTGacttaaatgtgtgtgaaatCAGAAACCTTTGTGGGAGCTGGCTTACTACTTAATTGTAAAACTCATTGTAAAAAGTAAATCtttcatatttacagtttgaatttcaccCATCACGTTTTAATGCAAAGTAATTTaaattttctaaaatattttgCATCACTTTGAGCACTTTTGTGTGATGAGTGTTTGTTTTCTGAGTTAAGTGAGTTTTAGAATATCCCACAATTACAATTCACCTAAATCTGTCAAAGTGGACAGTACCGCTATCAAAGGAAGCTGTTAATGTAAATAACTTGgaatttatttcaaataaaatattttactgaAAAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812539.1 True 1607 mRNA 0.41 5 23627091 23630156

Neighbor

gene id symbol gene type direction distance location
mrpl11 mrpl11 coding downstream 726 23588130 ~ 23626365 (-)
ccdc85b ccdc85b,LOC102791751 coding downstream 87705 23536699 ~ 23539386 (-)
yif1a yif1a coding downstream 100131 23520126 ~ 23526960 (-)
si:ch211-145o7.3 LOC104968223,LOC103390737 coding downstream 107081 23514615 ~ 23520010 (-)
atl3 atl3 coding downstream 112915 23501341 ~ 23514176 (-)
si:rp71-46j2.7 LOC103373861,LOC102778070 coding upstream 1346 23631502 ~ 23639346 (-)
slc25a5 slc25a5,LOC106926499,LOC104931197,LOC103140121 coding upstream 13132 23643288 ~ 23645496 (-)
slc25a43 slc25a43,LOC102789340 coding upstream 15979 23646135 ~ 23651722 (-)
chic1 LOC102788766,LOC101478093,LOC108231262,LOC104958396 coding upstream 56438 23686594 ~ 23692809 (-)
cdx4 cdx4 coding upstream 64114 23694270 ~ 23697490 (-)
G107324 atg2a,si:ch73-45o6.2,LOC107660800 non-coding downstream 363192 23242037 ~ 23263899 (-)
G107282 NA non-coding downstream 402635 23170148 ~ 23224456 (-)
G107290 LOC105026702,LOC106604372 non-coding downstream 445374 23179692 ~ 23181717 (-)
G107220 NA non-coding downstream 653331 22928854 ~ 22973760 (-)
G107215 NA non-coding downstream 750632 22875496 ~ 22876459 (-)
G107610 NA non-coding upstream 161898 23792054 ~ 23792502 (-)
G107667 NA non-coding upstream 569343 24199499 ~ 24259346 (-)
LOC120566461 NA non-coding upstream 657993 24288149 ~ 24381312 (-)
G107742 NA non-coding upstream 801845 24432001 ~ 24454134 (-)
G107755 arhgef6 non-coding upstream 817965 24448121 ~ 24450769 (-)
rnaseh2c rnaseh2c other downstream 440033 23184192 ~ 23187058 (-)
trpt1 trpt1,LOC102777684 other downstream 450065 23092565 ~ 23177026 (-)
G107284 LOC103374305,LOC102779018 other downstream 492306 23129709 ~ 23134785 (-)
G107235 rom1,LOC103366586,LOC102779683 other downstream 633862 22990987 ~ 22993229 (-)
G107117 NA other downstream 934260 22691160 ~ 22692831 (-)
rab41 rab41,rab6ba,LOC106515338,LOC106604734,LOC107696768 other upstream 254432 23884588 ~ 23988901 (-)
G107864 LOC103353306,LOC105925836,LOC106916384,LOC103140164 other upstream 943285 24573441 ~ 24579099 (-)
trnav-uac_15 NA other upstream 1231814 24861970 ~ 24862184 (-)
ndufa1 NA other upstream 1633016 25263172 ~ 25264864 (-)
G107989 NA other upstream 1649447 25279603 ~ 25288086 (-)

Expression


Co-expression Network