aldob (aldob)


Basic Information

Item Value
gene id aldob
gene name aldob
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19331706 ~ 19334698 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812548.1
ACCTGGGTGACACACGCCCCGCCACATCACGAGCACCTCCTCCACAGCAACAAACAGCCTTTAAATACAGCTTCGTGCCCAGTTTTCGACCTCTCTGTACAGGCCGTTTGCTACTTCTGTTGCCGTTGTTATTTGAAAAAACTCTGAAAGATGACTCATCAGTTCCCATCCCTCTCTCCGGAGCAGAAGAAGGAGCTCTCTGACATTGCTCAGAGGATCGTGGCTCCAGGAAAGGGAATCCTGGCTGCAGATGAATCAACGGGAACCATGGGAAAGCGTCTCCAGAAAATCAATGTTGAAAACAACGAGGAGAACCGTCGCTACTTCCGCGACCTCCTCTTCTCCGCTGACCCCTTAATCTCCAACTGTGTGGGTGGGGTCATCTTCTTCCATGAGACTCTCTACCAGAAATCAAACAGCGGCAAGCTCTTCCCCCAAGTCATCAAGGATCAGGGCATTGTCGTCGGCATCAAGGTGGACAAAGGCACAGCTGGTCTAAACGGAACCGATGGAGAGACCACCACACAAGGTCTCGATGGCCTCTCAGAGCGCTGTGCCCAGTATAAGAAGGACGGTTGTGACTTTGCCAAGTGGAGGTGTGTGCTCAAGATCTCAGATAGCTGCCCATCAGCTCTCGCCATTGCAGAGAATGCCAATGTCCTTGCCAGATATGCCAGTATCTgccaacagAATGGCCTGGTGCCTATTGTGGAGCCAGAGATCCTGCCTGACGGAGACCATGACCTGCTGCGCTGCCAGTACGTCACAGAAAAGGTTCTGGCTGCTGTGTACAAGGCTCTGTCCGATCACCACGTGTACCTGGAGGGCACTCTGCTGAAGCCCAACATGGTCACTGCTGGACACTCCTGCACTAAGAAGTTCACCCCTCAGGAGGTTGGCATGGCCACCGTGACCGCTCTGAGGCGCACCGTCCCCTCTTCTGTGCCTGGCATTTGTTTCCTGTCTGGAGGCCAGAGTGAGGAGGAGGCATCCCGCAACCTGAACGCCATTAACCAGGTGCCTCTCCATCGCCCCTGGAAGCTGACCTTCTCTTACGGCCGTGCACTCCAGGCCTCTGCTCTTGCAGCCTGGCAGGGCAAAGCTGCCAACAAGGCAGCTGCACAAGAAGCATTCAAAACCAGGGCCAAGATCAATGGCCTGGCTGCCAAAGGAGAGTACAAGCCCTCCGGCTCAGCTGACCAGGCCTCCATGCAGTCTCTGTACACAGCCAGCTACGTCTATTAAATACTGTGAAcgttaaaaataaaaccaaatgcAAATGGACAAAATATGACCTGAAATGGCTCTGCTGGATTTCCCTTTTCCCTAAGACTACCAACACCAGGAGAAGACGTCCATTATAATGTTGAACTACTGTTTGTCTACTCAGTTAAAATAACTGGAAATAAATTAAGTGACCAAAA

Function

symbol description
aldob Predicted to enable fructose-1-phosphate aldolase activity and fructose-bisphosphate aldolase activity. Predicted to be involved in fructose 1,6-bisphosphate metabolic process and glycolytic process. Predicted to be located in cytoplasm and microtubule organizing center. Predicted to be active in cytosol. Is expressed in several structures, including EVL; alar plate midbrain region; digestive system; intestinal bulb primordium; and midbrain. Human ortholog(s) of this gene implicated in hereditary fructose intolerance syndrome and type 2 diabetes mellitus. Orthologous to human ALDOB (aldolase, fructose-bisphosphate B).

NR:

description
PREDICTED: fructose-bisphosphate aldolase B

GO:

id name namespace
GO:0006096 glycolytic process biological_process
GO:0004332 fructose-bisphosphate aldolase activity molecular_function

KEGG:

id description
K01623 ALDO; fructose-bisphosphate aldolase, class I

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812548.1 True 1424 mRNA 0.52 9 19331706 19334698

Neighbor

gene id symbol gene type direction distance location
arsia arsi,LOC104927051 coding downstream 26641 19301805 ~ 19305065 (-)
LOC120566716 LOC102215832 coding downstream 49032 19277131 ~ 19282674 (-)
pdgfrb pdgfrb coding downstream 128605 19176247 ~ 19203101 (-)
LOC120567146 csf1r coding downstream 155965 19161748 ~ 19175741 (-)
LOC120567311 NA coding downstream 184679 19145238 ~ 19147027 (-)
LOC120567398 NA coding upstream 31122 19365820 ~ 19373983 (-)
LOC120567397 NA coding upstream 41506 19376204 ~ 19384972 (-)
si:ch211-203d1.3 ssh3 coding upstream 79970 19414668 ~ 19426862 (-)
LOC120566441 LOC100707887 coding upstream 97618 19432316 ~ 19435195 (-)
slc25a51b slc25a51 coding upstream 129773 19464471 ~ 19469408 (-)
G106248 NA non-coding downstream 10400 19320263 ~ 19321306 (-)
G106243 NA non-coding downstream 17290 19312809 ~ 19314416 (-)
LOC120566721 LOC102291516,LOC101487913,LOC102195901 non-coding downstream 43237 19287076 ~ 19288469 (-)
LOC120566720 NA non-coding downstream 66230 19262913 ~ 19265476 (-)
LOC120566722 NA non-coding downstream 68834 19262030 ~ 19262872 (-)
G106259 NA non-coding upstream 5796 19340494 ~ 19450124 (-)
G106276 NA non-coding upstream 60112 19394810 ~ 19395994 (-)
G106303 NA non-coding upstream 142470 19477168 ~ 19557572 (-)
G106349 NA non-coding upstream 522398 19857096 ~ 19857367 (-)
G106378 LOC108242387 non-coding upstream 610957 19945655 ~ 20052690 (-)
LOC120566717 LOC102215832 other downstream 81270 19215989 ~ 19250436 (-)
rgs14b rgs14 other downstream 286755 19017752 ~ 19044951 (-)
LOC120566257 NA other downstream 640296 18687788 ~ 18691410 (-)
reep2 reep2,LOC102782871 other downstream 1017291 18285958 ~ 18314415 (-)
LOC120566360 fabp6,LOC102785055,LOC101485489 other downstream 1263214 18067425 ~ 18068492 (-)
tomm5 NA other upstream 101141 19435839 ~ 19436927 (-)
tlr1 LOC104951710,LOC102197886 other upstream 143232 19477930 ~ 19482625 (-)
fgf18a fgf18,LOC103359300,LOC103390897,LOC106511287,LOC105939829,LOC104951878 other upstream 637135 19971833 ~ 19981633 (-)
G106443 LOC103366336,LOC104937910,LOC104959671 other upstream 896210 20230908 ~ 20233924 (-)
LOC120566885 ppp2r2c other upstream 1741059 21075757 ~ 21110067 (-)

Expression


Co-expression Network