LOC120566298


Basic Information

Item Value
gene id LOC120566298
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 2587617 ~ 2590619 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812651.1
CATTTGCGGACTGAGCCAGTTGAGTTGAAGCAACCAGCGTTgataaagagaagagagagacatacacacacacacacacaaacacacacacacacacacacacacacacactctcattcaGCCTCTTTGAGAAGAAGAGGGGCTGGCATGGGGGGAAAGCTTCCAGCCCACATCCAGGTGAAACGGGACAATGGATTTCAATCTCAACTTCCTGTCAGTACACAGATCACACCAAAGACAGTCTGGGAGATGCGCTCTTGGTGCTGGCCTGGTTCAGCCACAGAGGGAGTGCTCTCGGCCTCTAGAGGATGGCTGCGTTTCTTCTTACTGCTGAAGCTGGTGACGGTGCTGTTGTTCCCCCACACAGCAGGCCTTCCCCTGCTGGTGGGCTGTGTGTTCAGCTTGCGGGCCCTGTTGCTGCTGCGCTCCCCTCACATCTCCACCAAGCCCTCCACTGTGCTCCTGGGCCGGCTGGCTCTGACAGACAGCCTCGTGCTGCTGCACTGGATGCTTCAGCCGGGAGCGCCACTCGTCTGGTTGATGGAGGAGGCGGGCTGTGAGACTACAACGGGCCTCATGGAGGAGGGGGAATCAGTTTGGTGGAGGGAGGCTGTGAGCATGCTCTGTCTGCAGCTGCTTGATGCTCACCACCTGGCCTCTCTGCTCCTGCTGGGGCTGCTGGGACTGGAGGCAACGTTGGTGTCACGCTGGCCTCAACAGACTCGCAGATTCAGGACTTCTCACTGGGCTCAGCTCAGCTGCAGCCTGGTCTGGACACTTGTGCTGCTTGAACTATTGTACTCGCTCCACTCACAACTTTTGACCAGGCCTCAGAATTATTTCACAACGCTACAAACCTCTCAAAGTTCCCCTCTGGGTCTGGTGCCTCTTCCCTCCCTTCCAGGTTTCTCCTCATGCCTGAGAAGGACATTATGGCTGGTGAATTTATGGCTGCATTATGTTGTCTTTTATAGCAGAAGAAAGAAGAGTAAGAGCTTCTTTCATTAAGAGTTATTgatattctattttatttatatagtaaaACTATTGTAATATTGCAGGAAATATTCTGAGTAAGATGTCTTTATATGGGCCTTAAATTGAGACTAACTGAACAATTTCCCCTTTGGCTACAATTGCATCACAAAAATTGACATGTgtgcacttttacttttgtgatAAAACCACTaaaatgtttatgtgtgtaataGTAGCACAAGTACAGGACACCATAAGcaactggtcataccagaccaactGAAGCTGTAGTAGTGTATCGCATAGAGAAAAGGTGCTTTTTGAACTTGACTTTTCATTTGTAAAAAGATGAAGACCATTCCAGGAAAGGCATAGATATTGTGAAATGTGGCTTTAGGCGGGATTTTCAATGAAAAGTTTCCTCTGTTTACATTGAAGAGGCTTGCAATCTCACATTTTAAGAGTGAGAGATTATGATCGGGTTCATATTGTAAACATGCTCTCATCCTGCAGTCTCTCAGCGGTTCGATCTGGCAGACAGACAAGATGTTAAAATGAAATACGGTGCTCTGACCaatgtttgcaaaataaaagaGCACAAGGCAACATATTAAGTAATTTAATGTTGCTCTTCACAGTCTCTAATTTGTGTTTCAAGATGTGTTCTGTTTGCATAATCATGTCCCCCTTGCTGCCCAATAACTCACATATGTCTGTTTACATTATTTGGCACCATATCATTTGcacagtaaaaagtaaaaaacacaaactggGATGGTTCAGTAGcaagatttgtttttctttccataAATGGAAACAGTTGCGTTTATCCACCCAGTTACTTAGCTAGCTACTGATCAGATAATACGCACACAAAAGCAATGTCTGCCTATATGAGTCAAACGATGGTCATGCTGATAAGACAGAAGCCACAAAAACACAGGGCTTAAGACTTGAAGACAGTACCCAGGCACATGGTGGTTGGAGCCCAGATTTCAGCTACTACAATCATCCTTGCATTACACAAATGTGTCTCTGATGATATAAAAGATCAAAGTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812651.1 True 2039 mRNA 0.46 2 2587617 2590619

Neighbor

gene id symbol gene type direction distance location
lpar4 lpar4 coding downstream 12328 2567904 ~ 2575289 (-)
p2ry10 NA coding downstream 22437 2558237 ~ 2565180 (-)
gpr174 LOC103366855,LOC104946189,LOC104946188 coding downstream 30027 2547232 ~ 2557590 (-)
tbx22 LOC103366841 coding downstream 72053 2507602 ~ 2515564 (-)
LOC120567016 fam46d coding downstream 98548 2481463 ~ 2489069 (-)
polr1d polr1d,LOC104920592,LOC104965767,LOC103366847 coding upstream 73608 2664227 ~ 2673203 (-)
pdgfrl pdgfrl,LOC100690066,LOC101468828 coding upstream 123555 2714174 ~ 2720027 (-)
zdhhc2 zdhhc2 coding upstream 184786 2775405 ~ 2793673 (-)
micu3b micu3,LOC104941480,LOC104920617 coding upstream 205630 2796249 ~ 2816202 (-)
her11 NA coding upstream 252468 2843087 ~ 2844699 (-)
G102824 NA non-coding downstream 40665 2531508 ~ 2546952 (-)
LOC120566605 NA non-coding downstream 49696 2536661 ~ 2537921 (-)
G102816 NA non-coding downstream 54078 2458068 ~ 2533539 (-)
G102822 NA non-coding downstream 86222 2500656 ~ 2501395 (-)
G102788 NA non-coding downstream 156342 2431035 ~ 2431275 (-)
G102849 NA non-coding upstream 34955 2625574 ~ 2657620 (-)
G102913 NA non-coding upstream 96245 2686864 ~ 2687080 (-)
G102914 NA non-coding upstream 97390 2688009 ~ 2690563 (-)
G102915 NA non-coding upstream 100212 2690831 ~ 2693555 (-)
G102916 NA non-coding upstream 103733 2694352 ~ 2694614 (-)
sh2d1aa sh2d1a,LOC102800107 other downstream 389699 2176867 ~ 2197918 (-)
insb LOC101469513,LOC102789752 other downstream 1745999 838946 ~ 841618 (-)
tmsb2 NA other downstream 2119167 466290 ~ 468450 (-)
G102276 NA other downstream 2356173 220592 ~ 231444 (-)
slc7a2 slc7a2,LOC102301583 other upstream 134841 2725460 ~ 2740487 (-)
pabir2 LOC104944540,LOC105929195,LOC106528854 other upstream 300351 2890970 ~ 2898545 (-)
LOC120567496 NA other upstream 305552 2896171 ~ 2896313 (-)
guf1 guf1,LOC102797887 other upstream 1033540 3624159 ~ 3642640 (-)
G103268 NA other upstream 1312372 3902991 ~ 3925309 (-)

Expression


Co-expression Network