med19a (med19)


Basic Information

Item Value
gene id med19a
gene name med19
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 21311037 ~ 21314140 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812664.1
TACGTGGGCCAAGAAAATAATGCCACAAAAGAAGTGAAGAGTCGAGTAGTTGACACACGAATGGATTCATGGTGAACATCCTAACGGATAACAGGCCAGACGCTCAAAGAAACCGGCTTTTTCTTTctatataaatgtattattcGTGATAGATATGACGGAAATGTTTTCAACTCTGTTCGGTCAAAATGAAGCTCAGGGACCGCCCGGCTCGGCGTCTCTGGGTTTCGGACCAGGGAAACCTCCACCGCCTCTGCCGCAAAATCAAGGCTCCATGGCGGGGCAGATGCCACCGCAGCTCGGGGATGAAGGGCCTGCTCTGCGGAAGCCCGGAGCCATGAATGAACCTTTCTACTTACTGCGGGAGCTTCCTGTGGGAAACGAGTTAACGGGCAACACCAACCTCATCACGCACTACAACCTAGAGCACGCCTACAACAAATTCTGTGGGAAGAAGGTGAAGGAGAAGCTCAGCAACTTTCTGCCAGAGTTACCAGGTATGATCGACTGTCCGGGCACTCAGGACGGCAGCTCATTGCGCTCTCTGATTGACAAGCCTCCAGTGTGTGGGAACTCCTTTAGCCCACTGACAGGCGCTCTGCTCACAGGCTTCAGACTACACACAGGACCGctacCAGAACAGTACAGACTAATGCACATACAGCCTCCAAAGAAGAAGAGCAAGCACAAGCACAAACACCATCGACCACAGGACCCATTACCACAAGAAACTCCATCAGACACTGAtcccaagaagaagaagaaaaagagagatgacGATCCCGAccgaaagaaaaagaagaaagacaagaaaaagaagaagAACCGCCACAGTCCCGACCACCCCGGCCTCGCTGGATCACAACCCAACAGCAACAGCCTCAGATAGACAGGAGCCCACTGTGTGCACGCCTGTTTGAATGTGTGCGTGACTGTGCATTTTGTAAGAGGATGCGTGTGTTTTACAGATAATTGTATTATTGCGAGTATGTTTATTGAGAGGGGATGAATCAAATAATGCAAatggttgtatgtgtgtgaaagtaaaagtagcagcaacacagtgggtgtgtgtgatgttgAAAAGAAAGGTTACTGTATAAAAGGCAGAAAGACGCTGGTGAGCTGTGTGGTGTTATGGATGACTGAGcaggcactgtatgtatgtccctctttgatTTTGTTGTGATATCTTTTGACCATAATGccaaaatcaaataaactttGGTTATTACCTTT

Function

symbol description
med19 Predicted to enable transcription coregulator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be part of mediator complex.

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0016592 mediator complex cellular_component

KEGG:

id description
K15137 MED19; mediator of RNA polymerase II transcription subunit 19

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812664.1 True 1239 mRNA 0.48 6 21311037 21314140

Neighbor

gene id symbol gene type direction distance location
si:dkey-6i22.5 NA coding upstream 78 21308092 ~ 21310959 (+)
clp1 clp1,LOC102795812 coding upstream 23231 21284018 ~ 21287806 (+)
rtn4rl2b LOC104945075,LOC103358608 coding upstream 39906 21264992 ~ 21271131 (+)
slc43a3b slc43a3 coding upstream 51991 21242454 ~ 21259046 (+)
LOC120566636 LOC104961169,LOC103354768,LOC101069382 coding upstream 128487 21179991 ~ 21182550 (+)
ssrp1a ssrp1 coding downstream 68587 21382727 ~ 21401180 (+)
p2rx3a p2rx3 coding downstream 92745 21406885 ~ 21415624 (+)
rad9a rad9a coding downstream 108912 21423052 ~ 21429502 (+)
ndufs8b ndufs8,LOC102288815,LOC100707179,LOC101466861 coding downstream 124111 21438251 ~ 21442888 (+)
ran ran coding downstream 129417 21443557 ~ 21446726 (+)
G106712 LOC103354767 non-coding upstream 105661 21204689 ~ 21205376 (+)
G106709 ctnnd1 non-coding upstream 108867 21196804 ~ 21202170 (+)
G106708 NA non-coding upstream 114383 21196179 ~ 21196654 (+)
G106707 NA non-coding upstream 116188 21193066 ~ 21194849 (+)
G106684 NA non-coding upstream 202678 21107498 ~ 21108359 (+)
G106851 NA non-coding downstream 132742 21446882 ~ 21447096 (+)
G106972 NA non-coding downstream 446858 21760998 ~ 21761444 (+)
G106975 NA non-coding downstream 449227 21763367 ~ 21763641 (+)
G106992 NA non-coding downstream 529522 21843662 ~ 21843950 (+)
G107025 LOC104954424,LOC103390732 non-coding downstream 1016872 22331012 ~ 22378340 (+)
selenoh selenoh other upstream 27808 21279687 ~ 21283229 (+)
hrh2a LOC103354784,LOC104948895 other upstream 363622 20934729 ~ 20947415 (+)
G106465 LOC104955902 other upstream 958870 20351721 ~ 20352167 (+)
LOC120566323 LOC102781894,LOC101481808 other upstream 1249699 20028863 ~ 20061338 (+)
G106237 spock1 other upstream 1658563 19604840 ~ 19652474 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other downstream 134660 21448800 ~ 21468827 (+)
G107163 LOC103356264 other downstream 1548050 22862190 ~ 22865676 (+)
ubxn1 ubxn1,LOC103374193 other downstream 1589615 22903755 ~ 22909562 (+)
rom1b rom1,LOC102779683 other downstream 1636455 22950595 ~ 22997038 (+)
G107168 NA other downstream 1640832 22954972 ~ 22973761 (+)

Expression


Co-expression Network