LOC120566320


Basic Information

Item Value
gene id LOC120566320
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 4741950 ~ 4752833 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812677.1
ATCCAACAACAGCATACATATTATGTTTTTGTGCTTGTCGTCACATGCagagctgtctgtgtgtgcctgtgtgtttgtctgaaaCACTTCACCACAAAAACCACAATGCAATGTACAGTTAGACTTCCACATACACATCCTCATTCGtacctgctgtctgtctgctagCTCGCTGTAGCTGTCACGACAGTCAGAAATCATTCTCTGGCTTTTCGAAAATGCAGGAGAGCTCTGCTTCCAAAGGTGAAAAGACATGGACAAGACCTAGAAGATGGTGTTGTTTTTGGATACTATTACTCGTGATGGTAATGTTAATTACCTTCTACATTTCGAGCCCCAAAGTATCATGGCCTTTGAAGTATTGGAGGACACGCTCACATTCAAGCCAATCTTACAGCAATAAGACTACTACAGTCCACAGTGTCTCCCCAGAGGCCCCAGATGCCCCAGATGGCCCTCCAGCGTACTTTGTTGCTTACCCGCACCAGTATGGTTTCGTTTTGGACGAACCCCATAGATGTCAGCAGGAAAGCCCATTCTTGGTTCTTATGATCCAAGTCGCACCCCACAACAGAGAGGCCCGTGACGTAATCCGCAACACGTGGGGCAAAGAAACTACTGTGCTTGGCAGGGTGGTCAGCCACTACTTCCTGCTGGGAATGTCCAAACAGCAAGATGGGACAGAAACCATTAAGGAGCAAGTGTTACAAGAAAGCCAGAGACATCATGATATTCTTCAGAGTGACTTCTTGGACAGCTACAATAACCTCACCATTAAAACTATGGTCATGTTCGAATGGCTCAGCTCCCATTGCCCCAACACCTCCTACGCCATGAAGATTGACTCGGACATGTTCCTCAATGTCCACAACCTCGTCGACATGCTTTTGAAAGCCCCCCGACATCTCTACATGACAGGAATGGTGGCAAGGGGTGCTGCTGTTCTCAGAGACCAAAACTCAAAGTGGTTTCTTCCGGTGTCTGCCTTCCCTGAGTCTAGTTACCCACCGTATGCCCTGGGACTGGGCTATGTGTTCTCACTGGATTTACCCAAAAAGATACTGGAGGCGTCTGCACATGTTAAAGCTGTTTACATTGAAGATGTGTACGTGGGACTGTGTATGAGGCATTTGAGAATCGCACTGACAGATCCTCCTCATGGTAATTTGTTTAGGGCATATATGCCTACTAGGTCAAGCAACTGTTACTGGACCTCTGTCATTACAACGTTACTGCAGAACTCTAACCAACTTTCAGATGTATGGGGAACATACCAGACTCAAGCACAGAGTGGCTGTTAACACTTTTGCCCGTGCCTTACAAAAACTATGTAACTGCATAGCCCTGTTGCACAGCACAGCAGTTACAACACCACTCTGTTTATATCCTAAGTTGCTGCCTTgataacatattttttttcatctttgaaGTACGATCGGGACTTTGGAGATCTAAACAACAGAGATTGTGAGACAGATATACATTTTCAGGCTTAGCAAAATGTGTTCATATCTTAGGTATTTGCGAAGATTGCACAAATAATTGTAAAGATGTCAATAATATTAAGATTTTGGGATGGagatcagttttttttatgaattgctCTTGTGTCCATGCAGTACATAGAATGTAACAAATGTAATTAAACAGGGAGTTAGCAGGCCTGGTAGTTACCACACTGTGAACGGATGGAGTTGTCTGGAAGTAAAGCACCTATATGTAGCATATTATTGTAATTTAATGGTATGAAGGAAAATGATTGTCAAAGGGAAATGATTAGCACAAACAAATAGTCATGATTAAGATTGCGTGTCAGACGTTCACCACTGAAACTTCCCTCAGAGGAAGAGGCCGACCTAACACTGCCGCTGCGTAGCAGAGTGCATTGAAAGTTACACAACGGCACACATTAGACAGTTCACACAGtctgctgcagaacagctgTAGTTACTACAACTCTGGAATAATCTGAATAACCACGACATTAATGGCATTAACTGTCAGAAATGCCAGAATATTCACCAGCAAATTAACTTTGTATAGTGGTAAACGGAAGAGCATGATAGCGTCACTGACTATGACACGAGCATGCATGATATCGGTCAgtgaacaaaaaaatatttcccaCACTTCCTTGGTTGCTCATTAAAGTTCCAACTAAAGACATGCATGTGTTGCACACAGATTATCTTTCGCAAAGATCTGATAAAGTGAGGATGTGTTCGTTTACTGAGTGATGTAAAGTGCTTGAATCAGAGTGAAAGACTTGGCGTGCCGTTTGCCTTTTATCTTAGGTACTGTCATGACTGTATGTTCTGTGCTTAATCTACGGTATTTGTCTTTGAAAATACAGCTAAATGGATGAGAAGAAATACGCAGTACAGTAACAATTGTGCAAATAATTATGAATAATGGAATACAATATATTTCTTTAACATATTTTTCCCAGTTGTCCTAAAAATGACCATTCCAAACAACAAAGCTGCATTCTCAATTATGTATTAAGGGAAACATATTTTGTCCCTGATAACGTTTGTATTTGACATATCACAAATACGTTTCTAATCAAAGTCCACCAAAGTCTGCATAGGGAGTAGGTTGGGGTGGATGgacggttaaaaaaaacaaaagactttcacccaggagaccgctgtTCATGTCCTGTGTGAACCCAACAGTCATCGTCGACTTACATCATATAATGTAACAAACGTACTTATTTGAATCCATCGAATCAACCATcttctcctaaacctaaccaagtagttttgtttcaattcacGGCGTTAACCATGTGTTTAAAACAGCAACTGTTCTGCATGAACGCTGGAAAATACATTTCCCTCACAACGCAATTGAAAATGCAGAATCGTTCCGGGAATGTCTTTTTTCAGGAGACGGGGTTCAATTATTGTAGGAGCTGTTTTAGAGAAAATAGAGTTGACCAACATTATGGTCATTTAATTGTtgcagtttgtggtgctgttgagtTGCATCACGCTACACTGAGAGTTGTTTCTAATTTCTTATTAATGAGTTTTTTTAGCTACTCTAGAGGCGTGGCTCTGAGGATGGCAATCACTTAGTCCATCACTTTGGCCCATACTAAAATGTCTCAACTACTGAATGGATTACTATGTAATTTTGTACATCATTTATTGTCCCCAAAGGATAAATCCTACTGGCTTTTATTGA
>XM_039812678.1
tctaaACAGCTACACATTAATCACAGCTAATGAGGAACGCCTACATTACTGTGAAAAGACATGGACAAGACCTAGAAGATGGTGTTGTTTTTGGATACTATTACTCGTGATGGTAATGTTAATTACCTTCTACATTTCGAGCCCCAAAGTATCATGGCCTTTGAAGTATTGGAGGACACGCTCACATTCAAGCCAATCTTACAGCAATAAGACTACTACAGTCCACAGTGTCTCCCCAGAGGCCCCAGATGCCCCAGATGGCCCTCCAGCGTACTTTGTTGCTTACCCGCACCAGTATGGTTTCGTTTTGGACGAACCCCATAGATGTCAGCAGGAAAGCCCATTCTTGGTTCTTATGATCCAAGTCGCACCCCACAACAGAGAGGCCCGTGACGTAATCCGCAACACGTGGGGCAAAGAAACTACTGTGCTTGGCAGGGTGGTCAGCCACTACTTCCTGCTGGGAATGTCCAAACAGCAAGATGGGACAGAAACCATTAAGGAGCAAGTGTTACAAGAAAGCCAGAGACATCATGATATTCTTCAGAGTGACTTCTTGGACAGCTACAATAACCTCACCATTAAAACTATGGTCATGTTCGAATGGCTCAGCTCCCATTGCCCCAACACCTCCTACGCCATGAAGATTGACTCGGACATGTTCCTCAATGTCCACAACCTCGTCGACATGCTTTTGAAAGCCCCCCGACATCTCTACATGACAGGAATGGTGGCAAGGGGTGCTGCTGTTCTCAGAGACCAAAACTCAAAGTGGTTTCTTCCGGTGTCTGCCTTCCCTGAGTCTAGTTACCCACCGTATGCCCTGGGACTGGGCTATGTGTTCTCACTGGATTTACCCAAAAAGATACTGGAGGCGTCTGCACATGTTAAAGCTGTTTACATTGAAGATGTGTACGTGGGACTGTGTATGAGGCATTTGAGAATCGCACTGACAGATCCTCCTCATGGTAATTTGTTTAGGGCATATATGCCTACTAGGTCAAGCAACTGTTACTGGACCTCTGTCATTACAACGTTACTGCAGAACTCTAACCAACTTTCAGATGTATGGGGAACATACCAGACTCAAGCACAGAGTGGCTGTTAACACTTTTGCCCGTGCCTTACAAAAACTATGTAACTGCATAGCCCTGTTGCACAGCACAGCAGTTACAACACCACTCTGTTTATATCCTAAGTTGCTGCCTTgataacatattttttttcatctttgaaGTACGATCGGGACTTTGGAGATCTAAACAACAGAGATTGTGAGACAGATATACATTTTCAGGCTTAGCAAAATGTGTTCATATCTTAGGTATTTGCGAAGATTGCACAAATAATTGTAAAGATGTCAATAATATTAAGATTTTGGGATGGagatcagttttttttatgaattgctCTTGTGTCCATGCAGTACATAGAATGTAACAAATGTAATTAAACAGGGAGTTAGCAGGCCTGGTAGTTACCACACTGTGAACGGATGGAGTTGTCTGGAAGTAAAGCACCTATATGTAGCATATTATTGTAATTTAATGGTATGAAGGAAAATGATTGTCAAAGGGAAATGATTAGCACAAACAAATAGTCATGATTAAGATTGCGTGTCAGACGTTCACCACTGAAACTTCCCTCAGAGGAAGAGGCCGACCTAACACTGCCGCTGCGTAGCAGAGTGCATTGAAAGTTACACAACGGCACACATTAGACAGTTCACACAGtctgctgcagaacagctgTAGTTACTACAACTCTGGAATAATCTGAATAACCACGACATTAATGGCATTAACTGTCAGAAATGCCAGAATATTCACCAGCAAATTAACTTTGTATAGTGGTAAACGGAAGAGCATGATAGCGTCACTGACTATGACACGAGCATGCATGATATCGGTCAgtgaacaaaaaaatatttcccaCACTTCCTTGGTTGCTCATTAAAGTTCCAACTAAAGACATGCATGTGTTGCACACAGATTATCTTTCGCAAAGATCTGATAAAGTGAGGATGTGTTCGTTTACTGAGTGATGTAAAGTGCTTGAATCAGAGTGAAAGACTTGGCGTGCCGTTTGCCTTTTATCTTAGGTACTGTCATGACTGTATGTTCTGTGCTTAATCTACGGTATTTGTCTTTGAAAATACAGCTAAATGGATGAGAAGAAATACGCAGTACAGTAACAATTGTGCAAATAATTATGAATAATGGAATACAATATATTTCTTTAACATATTTTTCCCAGTTGTCCTAAAAATGACCATTCCAAACAACAAAGCTGCATTCTCAATTATGTATTAAGGGAAACATATTTTGTCCCTGATAACGTTTGTATTTGACATATCACAAATACGTTTCTAATCAAAGTCCACCAAAGTCTGCATAGGGAGTAGGTTGGGGTGGATGgacggttaaaaaaaacaaaagactttcacccaggagaccgctgtTCATGTCCTGTGTGAACCCAACAGTCATCGTCGACTTACATCATATAATGTAACAAACGTACTTATTTGAATCCATCGAATCAACCATcttctcctaaacctaaccaagtagttttgtttcaattcacGGCGTTAACCATGTGTTTAAAACAGCAACTGTTCTGCATGAACGCTGGAAAATACATTTCCCTCACAACGCAATTGAAAATGCAGAATCGTTCCGGGAATGTCTTTTTTCAGGAGACGGGGTTCAATTATTGTAGGAGCTGTTTTAGAGAAAATAGAGTTGACCAACATTATGGTCATTTAATTGTtgcagtttgtggtgctgttgagtTGCATCACGCTACACTGAGAGTTGTTTCTAATTTCTTATTAATGAGTTTTTTTAGCTACTCTAGAGGCGTGGCTCTGAGGATGGCAATCACTTAGTCCATCACTTTGGCCCATACTAAAATGTCTCAACTACTGAATGGATTACTATGTAATTTTGTACATCATTTATTGTCCCCAAAGGATAAATCCTACTGGCTTTTATTGA

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812677.1 True 3195 mRNA 0.41 4 4741950 4752833
XM_039812678.1 False 3002 mRNA 0.41 4 4741950 4748058

Neighbor

gene id symbol gene type direction distance location
si:zfos-2326c3.2 LOC103357640,LOC101482059 coding downstream 16892 4623574 ~ 4725058 (-)
si:ch211-159i8.4 LOC104955358,LOC102291224 coding downstream 200009 4493247 ~ 4541941 (-)
rab33a rab33a,LOC101483604 coding downstream 255494 4464570 ~ 4486456 (-)
aff2 aff2,LOC102788099 coding downstream 421379 4139145 ~ 4320571 (-)
dcps dcps coding downstream 651986 4070416 ~ 4089964 (-)
il1rapl2 LOC102203371,LOC101467026,LOC100703458,LOC102781211,LOC103357641 coding upstream 11249 4764082 ~ 5389853 (-)
LOC120566996 LOC106903289,LOC106939181,LOC103471019 coding upstream 917409 5670242 ~ 5696384 (-)
snx25 snx25 coding upstream 951068 5703901 ~ 5731235 (-)
LOC120566289 fgl1 coding upstream 979393 5732226 ~ 5746638 (-)
LOC120567274 NA coding upstream 1098950 5851783 ~ 5853546 (-)
G103461 NA non-coding downstream 7531 4734170 ~ 4734419 (-)
G103436 NA non-coding downstream 125343 4615980 ~ 4616607 (-)
G103426 NA non-coding downstream 182578 4558788 ~ 4559372 (-)
G103429 NA non-coding downstream 212068 4529595 ~ 4529882 (-)
G103366 NA non-coding downstream 573875 4167809 ~ 4168075 (-)
G103495 NA non-coding upstream 9505 4762338 ~ 4762926 (-)
G103493 NA non-coding upstream 10206 4763039 ~ 4764019 (-)
G103500 NA non-coding upstream 275942 5028775 ~ 5029037 (-)
G103512 LOC104947167 non-coding upstream 729333 5482166 ~ 5483398 (-)
G103513 NA non-coding upstream 736796 5489629 ~ 5489857 (-)
G103434 LOC102212171 other downstream 155866 4575782 ~ 4586084 (-)
myot LOC103355626,LOC104955473 other downstream 166274 4554225 ~ 4575676 (-)
fmr1 fmr1,LOC102779310 other downstream 284123 4426517 ~ 4457827 (-)
LOC120567378 NA other downstream 341892 4320649 ~ 4400058 (-)
smim19 smim19 other downstream 808730 3928930 ~ 3933220 (-)
LOC120566343 NA other upstream 2003959 6756792 ~ 6759576 (-)
G103806 NA other upstream 2533626 7286459 ~ 7286972 (-)
LOC120567361 NA other upstream 4414457 9167290 ~ 9177633 (-)
abhd18 abhd18 other upstream 4602879 9355712 ~ 9457863 (-)
LOC120566283 magt1,LOC102791632 other upstream 4811166 9563999 ~ 9569926 (-)

Expression


Co-expression Network