asb5a (asb5,LOC103355623,LOC101464329,LOC100697054,LOC107095814)


Basic Information

Item Value
gene id asb5a
gene name asb5,LOC103355623,LOC101464329,LOC100697054,LOC107095814
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 29852829 ~ 29859112 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812688.1
cacacatgcacacacagcagtAGGTGCTCTCAGGCACAGTAGCAGCTGCAGGGCATTTTTTTTCCAGCCTGGACCAGCCAACCAGTCAGTACACTGGGAGAAAAGTAGGTTACTCGTGTTTTTTGGAGTGTCATCTGATCCTGCGTCCATCATAACCAAAGCCCCTCTGTAACGTGTCAGGGGGAAATGTCAGACCCAACAGAGGAACTCACCAACAAGTCCTTTGCGGCCCGGTTGTCCAATGTTTACCTCAGCATCTTGGCACTGTTCTGCTTTAAGCTCCTTATTAAGATTTCTCTTAACTTGCTGACATACTTCTACATTATCCGTGGAAACCGTAAAGAGGCTGCCAGGATATCAGCAGAGTTCTATGAATATGGTCAACACAGGTCCTGGGCGGACCGCTCACCCCTCCACGATGCTGCGAGTCAGGGCCGCCTCTTGGCTCTGAAGAGCCTCATTTCACAGGGTCACAGTGTGAATGTTCGGACTATAGACCATGTGACACCCCTTCATGAGGCCTGTGATGGAGACCATGTCGCTTGTGCCAGAGCTCTCATTGATGCAGGAGCAAATGTCAATGCTTTTACAATTGATGGAGTCACCCCTCTGTTCAACGCCTGTACAGTGGGGAGTGTGGCATGCACAGaaattcttttggaaaatggaGCAAAACCCCAAAGCCTTGTATACCATCCATCACCAATCCATGAAGCTACATGCAAAGGTCATTACGGTTGTGTGGAGGCTCTGGTGACTTGGGGGGCAGATGTGGACATGGACATTCCTCACCTGGGCACAGCGCTCTATACAGCCTGCGTCTGCCAAGAGCTAGAGTGTGCCAGGAAACTCCTGAGGGAAGGTCAGCTCGCAGCACAGTGTGGATCTTTACATCTCCATACAGACGGGCACACATCCTGTGCAAATGTACAGAAAGGCAAATCCATGGATTCACCCTTACATGCAGCTGCAGAAAAAGACTGCACAGCTTTAGTGAAGCTGTTGCTGGACTTTGGTGCGGACATTAATGCCAGGAACCGAGAGCTTCAGAGGCCTGTAGATGTGGCTCCACCCAGCAGTCTAACAGAGGGTTTCCTACTGATATATGAAGCTACACCACGACTGCTGAGTCAGCTGTGTCGTCAGTGCATCAGGAACTGCGTCGACCGTGACAGACTCCATCTTCTTTCCCACCTGCCCCTGCCCATCAGGCTAAGGAACTACCTGCAGTACCAATAACAGGAAGAACAACCAAACTGCCTGCCTAAATGGGACGTAgagaaataattaaattaaattttatttatagtatcaaatcataacaagagttatctcaagacactttacagattaagacagatagagtaggtctagaccacactctataatttacaaagacccaacaattccagtaattcccccaagagcaagcatttggtgcgaaaTAAGCCTTTGTCAAAAAAGAGCAAATCAACTCCATGAACTCTTCCTACCTAGCTACCAGTCAATTAGTCACTGAGCAGCCACTGAGTTGCTGGAAGTACCAAGCTGAGTTGAGCTGGCCTGCAACCTATTGACCTGGATGAATGTAAAGCAGGGGGTTCTAAAAAGGAGCCAGGGCCATCCCTGGATAAATTATGGTTAAAcaatataataacaaaatagtATTTGCAATTCAGGTTTGCCTTATTTAGAAGATGCCTTAATAGCTGCAATAGCTGCCAGAGTGATTGCAACATTACATAATATTACAATGTCATGTGAATGAATATTCATAGTTTTTGGTTTGATATATTATCTATTGCATTGCACACTTCTAGATGATTAAAGTTGTTTTGAAACCTGG
>XM_039812689.1
cacatgcacacacagcagtAGGTGCTCTCAGGCACAGTAGCAGCTGCAGGGCATTTTTTTTCCAGCCTGGACCAGCCAACCAGTCAGTACACTGGGAGAAAAGTAGGTTACTCGTGTTTTTTGGAGTGTCATCTGATCCTGCGTCCATCATAACCAAAGCCCCTCTGTAACGTGTCAGGGGGAAATGTCAGACCCAACAGAGGAACTCACCAACAAGTCCTTTGCGGCCCGGTTGTCCAATGTTTACCTCAGCATCTTGGCACTGTTCTGCTTTAAGCTCCTTATTAAGATTTCTCTTAACTTGCTGACATACTTCTACATTATCCGTGGAAACCGTAAAGAGGCTGCCAGGATATCAGCAGAGTTCTATGAATATGGTCAACACAGGTCCTGGGCGGACCGCTCACCCCTCCACGATGCTGCGAGTCAGGGCCGCCTCTTGGCTCTGAAGAGCCTCATTTCACAGGGTCACAGTGTGAATGTTCGGACTATAGACCATGTGACACCCCTTCATGAGGCCTGTGATGGAGACCATGTCGCTTGTGCCAGAGCTCTCATTGATGCAGGAGCAAATGTCAATGCTTTTACAATTGATGGAGTCACCCCTCTGTTCAACGCCTGTACAGTGGGGAGTGTGGCATGCACAGaaattcttttggaaaatggaGCAAAACCCCAAAGCCTTGTATACCATCCATCACCAATCCATGAAGCTACATGCAAAGGTCATTACGGTTGTGTGGAGGCTCTGGTGACTTGGGGGGCAGATGTGGACATGGACATTCCTCACCTGGGCACAGCGCTCTATACAGCCTGCGTCTGCCAAGAGCTAGAGTGTGCCAGGAAACTCCTGAGGGAAGGTGCAAATGTACAGAAAGGCAAATCCATGGATTCACCCTTACATGCAGCTGCAGAAAAAGACTGCACAGCTTTAGTGAAGCTGTTGCTGGACTTTGGTGCGGACATTAATGCCAGGAACCGAGAGCTTCAGAGGCCTGTAGATGTGGCTCCACCCAGCAGTCTAACAGAGGGTTTCCTACTGATATATGAAGCTACACCACGACTGCTGAGTCAGCTGTGTCGTCAGTGCATCAGGAACTGCGTCGACCGTGACAGACTCCATCTTCTTTCCCACCTGCCCCTGCCCATCAGGCTAAGGAACTACCTGCAGTACCAATAACAGGAAGAACAACCAAACTGCCTGCCTAAATGGGACGTAgagaaataattaaattaaattttatttatagtatcaaatcataacaagagttatctcaagacactttacagattaagacagatagagtaggtctagaccacactctataatttacaaagacccaacaattccagtaattcccccaagagcaagcatttggtgcgaaaTAAGCCTTTGTCAAAAAAGAGCAAATCAACTCCATGAACTCTTCCTACCTAGCTACCAGTCAATTAGTCACTGAGCAGCCACTGAGTTGCTGGAAGTACCAAGCTGAGTTGAGCTGGCCTGCAACCTATTGACCTGGATGAATGTAAAGCAGGGGGTTCTAAAAAGGAGCCAGGGCCATCCCTGGATAAATTATGGTTAAAcaatataataacaaaatagtATTTGCAATTCAGGTTTGCCTTATTTAGAAGATGCCTTAATAGCTGCAATAGCTGCCAGAGTGATTGCAACATTACATAATATTACAATGTCATGTGAATGAATATTCATAGTTTTTGGTTTGATATATTATCTATTGCATTGCACACTTCTAGATGATTAAAGTTGTTTTGAAACCTGG
>XM_039812690.1
cacacacatgcacacacagcagtAGGTGCTCTCAGGCACAGTAGCAGCTGCAGGGCATTTTTTTTCCAGCCTGGACCAGCCAACCAGTCAGTACACTGGGAGAAAAGTAGGTTACTCGTGTTTTTTGGAGTGTCATCTGATCCTGCGTCCATCATAACCAAAGCCCCTCTGTAACGTGTCAGGGGGAAATGTCAGACCCAACAGAGGAACTCACCAACAAGTCCTTTGCGGCCCGGTTGTCCAATGTTTACCTCAGCATCTTGGCACTGTTCTGCTTTAAGCTCCTTATTAAGATTTCTCTTAACTTGCTGACATACTTCTACATTATCCGTGGAAACCGTAAAGAGGCTGCCAGGATATCAGCAGAGTTCTATGAATATGGTCAACACAGGTCCTGGGCGGACCGCTCACCCCTCCACGATGCTGCGAGTCAGGGCCGCCTCTTGGCTCTGAAGAGCCTCATTTCACAGGTCAATGCTTTTACAATTGATGGAGTCACCCCTCTGTTCAACGCCTGTACAGTGGGGAGTGTGGCATGCACAGaaattcttttggaaaatggaGCAAAACCCCAAAGCCTTGTATACCATCCATCACCAATCCATGAAGCTACATGCAAAGGTCATTACGGTTGTGTGGAGGCTCTGGTGACTTGGGGGGCAGATGTGGACATGGACATTCCTCACCTGGGCACAGCGCTCTATACAGCCTGCGTCTGCCAAGAGCTAGAGTGTGCCAGGAAACTCCTGAGGGAAGGTCAGCTCGCAGCACAGTGTGGATCTTTACATCTCCATACAGACGGGCACACATCCTGTGCAAATGTACAGAAAGGCAAATCCATGGATTCACCCTTACATGCAGCTGCAGAAAAAGACTGCACAGCTTTAGTGAAGCTGTTGCTGGACTTTGGTGCGGACATTAATGCCAGGAACCGAGAGCTTCAGAGGCCTGTAGATGTGGCTCCACCCAGCAGTCTAACAGAGGGTTTCCTACTGATATATGAAGCTACACCACGACTGCTGAGTCAGCTGTGTCGTCAGTGCATCAGGAACTGCGTCGACCGTGACAGACTCCATCTTCTTTCCCACCTGCCCCTGCCCATCAGGCTAAGGAACTACCTGCAGTACCAATAACAGGAAGAACAACCAAACTGCCTGCCTAAATGGGACGTAgagaaataattaaattaaattttatttatagtatcaaatcataacaagagttatctcaagacactttacagattaagacagatagagtaggtctagaccacactctataatttacaaagacccaacaattccagtaattcccccaagagcaagcatttggtgcgaaaTAAGCCTTTGTCAAAAAAGAGCAAATCAACTCCATGAACTCTTCCTACCTAGCTACCAGTCAATTAGTCACTGAGCAGCCACTGAGTTGCTGGAAGTACCAAGCTGAGTTGAGCTGGCCTGCAACCTATTGACCTGGATGAATGTAAAGCAGGGGGTTCTAAAAAGGAGCCAGGGCCATCCCTGGATAAATTATGGTTAAAcaatataataacaaaatagtATTTGCAATTCAGGTTTGCCTTATTTAGAAGATGCCTTAATAGCTGCAATAGCTGCCAGAGTGATTGCAACATTACATAATATTACAATGTCATGTGAATGAATATTCATAGTTTTTGGTTTGATATATTATCTATTGCATTGCACACTTCTAGATGATTAAAGTTGTTTTGAAACCTGG

Function

symbol description
asb5 Predicted to be involved in positive regulation of protein catabolic process and protein ubiquitination. Predicted to be located in cytosol.

NR:

description
ankyrin repeat and SOCS box protein 5-like isoform X2

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0016567 protein ubiquitination biological_process

KEGG:

id description
K10327 ASB5; ankyrin repeat and SOCS box protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812688.1 True 1846 mRNA 0.46 7 29852829 29859110
XM_039812689.1 False 1787 mRNA 0.46 7 29852829 29859108
XM_039812690.1 False 1740 mRNA 0.46 6 29852829 29859112

Neighbor

gene id symbol gene type direction distance location
spata4 NA coding downstream 145 29847910 ~ 29852684 (-)
gpm6aa gpm6a,LOC103355621,LOC104917912 coding downstream 11391 29819789 ~ 29841438 (-)
lrit3a lrit3,LOC100696521 coding downstream 34538 29811122 ~ 29818291 (-)
egf egf coding downstream 44791 29781903 ~ 29808038 (-)
gar1 gar1 coding downstream 321171 29528342 ~ 29531658 (-)
tdo2a tdo2 coding upstream 8420 29867532 ~ 29874648 (-)
si:dkey-237h12.3 tenm3 coding upstream 22078 29881190 ~ 30028138 (-)
neil3 neil3 coding upstream 231836 30090948 ~ 30102919 (-)
pdgfc pdgfc coding upstream 280697 30139809 ~ 30184692 (-)
ppid ppid coding upstream 678715 30537827 ~ 30548407 (-)
G108600 NA non-coding downstream 76408 29723824 ~ 29776421 (-)
LOC120567321 NA non-coding downstream 102293 29553435 ~ 29750536 (-)
G108560 NA non-coding downstream 578875 29273594 ~ 29273954 (-)
LOC120567081 NA non-coding downstream 923924 28833175 ~ 28928905 (-)
G108524 LOC104954097 non-coding downstream 1171730 28678279 ~ 28681099 (-)
G108702 NA non-coding upstream 416752 30275864 ~ 30282627 (-)
G108718 NA non-coding upstream 528409 30387521 ~ 30387854 (-)
G108722 NA non-coding upstream 543548 30402660 ~ 30403036 (-)
G108772 rapgef2 non-coding upstream 793758 30652870 ~ 30654526 (-)
G108785 NA non-coding upstream 874447 30733559 ~ 30733770 (-)
cxcl14 cxcl14 other downstream 1044835 28797298 ~ 28807994 (-)
fam13b fam13b,LOC102777128 other downstream 1057321 28714863 ~ 28795508 (-)
LOC120566547 NA other downstream 1814129 28024570 ~ 28038700 (-)
G108433 neto1,LOC101071133 other downstream 1829600 28021737 ~ 28023229 (-)
LOC120566991 NA other downstream 1897135 27952256 ~ 27955694 (-)
gask1b fam198b,LOC102776406 other upstream 487866 30346978 ~ 30356856 (-)
G108777 rapgef2 other upstream 801800 30660912 ~ 30661623 (-)
G108781 rapgef2 other upstream 810419 30669531 ~ 30670849 (-)
LOC120566409 limch1 other upstream 1525978 31385090 ~ 31423481 (-)
LOC120566557 limch1 other upstream 1560767 31419879 ~ 31485976 (-)

Expression


Co-expression Network