spata4


Basic Information

Item Value
gene id spata4
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 29847910 ~ 29852684 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812694.1
GGCGGCCGAGTTTATTGTTAAGTCCTACATGGAAATATGAGGGAGTGGAGCAGCAAGTGTTTGTGTCTAATGCTGAGCCAATCTACTGCCCTGAAGACATTATGAACAAAATCATATGACTAAAGTAGCCCACAGAAGTATTTCACAATTGCGTGGTTGTATTACATCATGTGTTAAGTGTTCCTTATTTgtctatttcattttttatactgGTAAAAAATGAATTAGTTGGAATCTCTCTGTAAATTTCTGTATTAATGTTACATCCTGAGGGGCAGTAAACAGCCACCACTGTCTGAGTGCTGCTGTTGTcaaagtagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcatggatgtattaagtgTCGTTACCATGGTAACGTTAATGTAAACAAAGGAAGTCCAGTGCGTCAAATTGCAGCTCGCTAAcccatctagctagctagctaattaattagctaggGTTTAGCATGATTTCGTGGATTGACTTGTTATAGCCTATATAACAGTAAAACACTATTTGTTTCTCGATTTCATCAGGCTCAGAGCAGCATGTCTTATGCACAGTCTCCCAAAAAGACGGGACTACCAAGAGAAGTCGTGAAATGGCTGCTAAGCCTCGACTTGTCATTTTATCCGAAGAATGTTCGCAGAGAACTTTCCAATGGTTAtcttgtggcagagatattgtcTCGTTATTACCCCCAAGACTTTCCAGTGCATTCATATGACAAAGGAATATCACTTTCTGCCAAACAGAGGAACTGGAGCCAGATAGAGAGgTCTTTACAGAAGCAGAATTTGTACTTGATGAAAGAGGTCATTGATGGATCCATCCACTGTAAACCAAGAGCAGCTGAACTGTTGGTGCAGGAGGTTTATACTATTTTAACTAACAGGAGCATCAGAGATGTTCAGGGCCCAGAGTCAGACTTCACTGACCAGGAGTACCAGGAGCTTCTACCCACACTGGCCCGCTCCACGGCCTCCAAGGCCATCAAGAACAACCTGAGGATAACGGAGATCATGGCTGAGCCCAATATCAGCACAAACCAGAGGAAGGCAGAAGTCATCCTAAGAAGGCACTTGGAGCACAAGGCCGCAGAGAGGGTCTCTAACCCTGGACGTTTTAAAGTGAAGCCTAAGCTGGGACGGCCGGGAGCCAAAAATCTTGTGACATCCAGCCGCGGCGATGACACTACATCAAAGTTCTGCTCCTCGTCAACATGGAGCGGTGCTGCTGTTTCCTTTAAGGAAATAAAGGTGCACCAGCCTGCCAGGCGCTCCCTGGTTCACTATTAAAGGAACTGGATCGAGATCTGTGCTATAATTGTATTgtgttttccctaggtttgtggaagGATTAGGTGCACGTATTTGGTGTGGGGGGGTcttaaacaatgaaaaaagcTAGAGGagataataaatacaaaaaaaaaaaaatctacaatcATTAGAGCTGAGAAAAAACATTaagttagttttgatgctcacatcTACTTACATTAATTCGGCATAGGTGGTGCCCAAAATGGTTTGGGTGCTGCACCAAAGTCttataatggtagggaaaacactggttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcacttgaTGTATTGATATGTTTTTCACAATTAGGCCATTCAAAGCATAGCCTATTTTAACTACTATGCCTCACAAGTATTTATTGGAGTATACTTTGTTTTGGAAGACAGAGGATGTCACTGTTTGTTATGGCTTATGTAATGTTCTAGTGCCTCTTTCATAATTCTTAGGTCTGTTTGGACCAGTAGGTGGCAGCAACAAGTCACGAGCAGAGCTCTTTCAGACTCAAACCCACTGCTATAGGTGTACCAttgacaaaaagaagaaataaatgcAGCAGAAACCGAACGGCCTTGCTGTtaatatgtttgtgttgttCACTGTGCTATTCCAGAGTTCCTCCGCCCTTTGCTGAACGTGCATCTTCCCTTCTTTACCATCACTGTGGCAACAGACATTTTTCTCAATCTGCATTCTAAGAAATTGTGATCAGCCACCTGCCAAATGCTGGTCAAATTGTGATTCAGATTATTACATTCACTGTGGTAGGCACCACTTTAGGTAACCTATAACTGATAATGATTCCTGAATTGGCTTGCTAGAGTTGGGGAGTAATGAGTACCAGTGACATGTAGACATGAAAGCTTGTTTCTCATTTAATCATTATGTTATTAGTCATCATGTTCCAACTTGTATAGCCCTTGGTTGAATATATTTCAGCACTTGTATGGACTGGTGTCTACATTTAAGGTATATTTAATGATGCTGTTGACTAAAGGCTACATATGTTTTTCTATGGATATGTCAATAAAACTTTCATCCATGATAACACATTAAATGTGCTGACACATTTTGTGCCATCTAGAGCTGCAGAAGAAGCTAATTGTGGGTAAAAATGCCATATCTATAATAATGATTGTATTAAAAACTTGTCAAAAAGGAGATGATGGGAAGATGTATTAAATTACTCATGGTTTGCATACTGGAA
>XM_039812695.1
GGCGGCCGAGTTTATTGTTAAGTCCTACATGGAAATATGAGGGAGTGGAGCAGCAAGTGTTTGTGTCTAATGCTGAGCCAATCTACTGCCCTGAAGACATTATGAACAAAATCATATGACTAAAGTAGCCCACAGAAGTATTTCACAATTGCGTGGTTGTATTACATCATGTGTTAAGTGTTCCTTATTTgtctatttcattttttatactgGTAAAAAATGAATTAGTTGGAATCTCTCTGTAAATTTCTGTATTAATGTTACATCCTGAGGGGCAGTAAACAGCCACCACTGTCTGAGTGCTGCTGTTGTcaaagtagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcatggatgtattaagtgTCGTTACCATGGTAACGTTAATGTAAACAAAGGAAGTCCAGTGCGTCAAATTGCAGCTCGCTAAcccatctagctagctagctaattaattagctaggGTTTAGCATGATTTCGTGGATTGACTTGTTATAGCCTATATAACAGTAAAACACTATTTGTTTCTCGATTTCATCAGGCTCAGAGCAGCATGTCTTATGCACAGTCTCCCAAAAAGACGGGACTACCAAGAGAAGTCGTGAAATGGCTGCTAAGCCTCGACTTGTCATTTTATCCGAAGAATGTTCGCAGAGAACTTTCCAATGGTTAtcttgtggcagagatattgtcTCGTTATTACCCCCAAGACTTTCCAGTGCATTCATATGACAAAGGAATATCACTTTCTGCCAAACAGAGGAACTGGAGCCAGATAGAGAGgTCTTTACAGAAGCAGAATTTGTACTTGATGAAAGAGGTCATTGATGGATCCATCCACTGTAAACCAAGAGCAGCTGAACTGTTGGTGCAGGAGGTTTATACTATTTTAACTAACAGGAGCATCAGAGATGTTCAGGGCCCAGAGTCAGACTTCACTGACCAGGAGTACCAGGAGCTTCTACCCACACTGGCCCGCTCCACGGCCTCCAAGGCCATCAAGAACAACCTGAGGATAACGGAGATCATGGCTGAGCCCAATATCAGCACAAACCAGAGGAAGGCAGAAGTCATCCTAAGAAGGCACTTGGAGCACAAGGCCGCAGAGAGGGTCTCTAACCCTGGACGTTTTAAAGTGAAGCCTAAGCTGGGACGGCCGGGAGCCAAAAATCTTGTGACATCCAGCCGCGGCGATGACACTACATCAAAGTTCTGCTCCTCGTCAACATGGAGCGGTGCTGCTGTTTCCTTTAAGGAAATAAAGGTCTGTTTGGACCAGTAGGTGGCAGCAACAAGTCACGAGCAGAGCTCTTTCAGACTCAAACCCACTGCTATAGGTGTACCAttgacaaaaagaagaaataaatgcAGCAGAAACCGAACGGCCTTGCTGTtaatatgtttgtgttgttCACTGTGCTATTCCAGAGTTCCTCCGCCCTTTGCTGAACGTGCATCTTCCCTTCTTTACCATCACTGTGGCAACAGACATTTTTCTCAATCTGCATTCTAAGAAATTGTGATCAGCCACCTGCCAAATGCTGGTCAAATTGTGATTCAGATTATTACATTCACTGTGGTAGGCACCACTTTAGGTAACCTATAACTGATAATGATTCCTGAATTGGCTTGCTAGAGTTGGGGAGTAATGAGTACCAGTGACATGTAGACATGAAAGCTTGTTTCTCATTTAATCATTATGTTATTAGTCATCATGTTCCAACTTGTATAGCCCTTGGTTGAATATATTTCAGCACTTGTATGGACTGGTGTCTACATTTAAGGTATATTTAATGATGCTGTTGACTAAAGGCTACATATGTTTTTCTATGGATATGTCAATAAAACTTTCATCCATGATAACACATTAAATGTGCTGACACATTTTGTGCCATCTAGAGCTGCAGAAGAAGCTAATTGTGGGTAAAAATGCCATATCTATAATAATGATTGTATTAAAAACTTGTCAAAAAGGAGATGATGGGAAGATGTATTAAATTACTCATGGTTTGCATACTGGAA

Function

NR:

description
spermatogenesis-associated protein 4

GO:

id name namespace
GO:0010876 lipid localization biological_process
GO:0006869 lipid transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812694.1 True 2679 mRNA 0.42 6 29847910 29852684
XM_039812695.1 False 2084 mRNA 0.42 7 29847910 29852684

Neighbor

gene id symbol gene type direction distance location
gpm6aa gpm6a,LOC103355621,LOC104917912 coding downstream 6472 29819789 ~ 29841438 (-)
lrit3a lrit3,LOC100696521 coding downstream 29619 29811122 ~ 29818291 (-)
egf egf coding downstream 39872 29781903 ~ 29808038 (-)
gar1 gar1 coding downstream 316252 29528342 ~ 29531658 (-)
LOC120567329 LOC107095807,LOC107379637,LOC102193053,LOC103355614,LOC108236668 coding downstream 319918 29523571 ~ 29527992 (-)
asb5a asb5,LOC103355623,LOC101464329,LOC100697054,LOC107095814 coding upstream 145 29852829 ~ 29859112 (-)
tdo2a tdo2 coding upstream 14848 29867532 ~ 29874648 (-)
si:dkey-237h12.3 tenm3 coding upstream 28506 29881190 ~ 30028138 (-)
neil3 neil3 coding upstream 238264 30090948 ~ 30102919 (-)
pdgfc pdgfc coding upstream 287125 30139809 ~ 30184692 (-)
G108600 NA non-coding downstream 71489 29723824 ~ 29776421 (-)
LOC120567321 NA non-coding downstream 97374 29553435 ~ 29750536 (-)
G108560 NA non-coding downstream 573956 29273594 ~ 29273954 (-)
LOC120567081 NA non-coding downstream 919005 28833175 ~ 28928905 (-)
G108524 LOC104954097 non-coding downstream 1166811 28678279 ~ 28681099 (-)
G108702 NA non-coding upstream 423180 30275864 ~ 30282627 (-)
G108718 NA non-coding upstream 534837 30387521 ~ 30387854 (-)
G108722 NA non-coding upstream 549976 30402660 ~ 30403036 (-)
G108772 rapgef2 non-coding upstream 800186 30652870 ~ 30654526 (-)
G108785 NA non-coding upstream 880875 30733559 ~ 30733770 (-)
cxcl14 cxcl14 other downstream 1039916 28797298 ~ 28807994 (-)
fam13b fam13b,LOC102777128 other downstream 1052402 28714863 ~ 28795508 (-)
LOC120566547 NA other downstream 1809210 28024570 ~ 28038700 (-)
G108433 neto1,LOC101071133 other downstream 1824681 28021737 ~ 28023229 (-)
LOC120566991 NA other downstream 1892216 27952256 ~ 27955694 (-)
gask1b fam198b,LOC102776406 other upstream 494294 30346978 ~ 30356856 (-)
G108777 rapgef2 other upstream 808228 30660912 ~ 30661623 (-)
G108781 rapgef2 other upstream 816847 30669531 ~ 30670849 (-)
LOC120566409 limch1 other upstream 1532406 31385090 ~ 31423481 (-)
LOC120566557 limch1 other upstream 1567195 31419879 ~ 31485976 (-)

Expression


Co-expression Network