rtn4rl2b (LOC104945075,LOC103358608)


Basic Information

Item Value
gene id rtn4rl2b
gene name LOC104945075,LOC103358608
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 21264992 ~ 21271131 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812706.1
GCCGCAGCAACTCGTTCACCAGAGCTGAACCTCAGCAGAGATAGCAGCAAGCAGGCACTTCCACGCCGCGCAGGCTAACTCGCTTTCGGCTTTGGTTCGAGATGGAGAGTCGTAGGACCGTGAGGCGCTCCAGCGCCCGCAACTTCAAGGgtggTTTGTGTCTGTGGCTGATTCTGtggctggtggtggtgaagcCGAGCGGGGTGTCTGCATGCccgaggttgtgtgtgtgttaccccaCGCCCATGACGGTCAGCTGCCAGTCCCAGAACCTTACCATAGTGCCGGCCGGTGTGCCATATGACTCTCAACGTGTTTTCCTGCAGAACAACCGCATCACAGAGCTGCGTGCCGACTCTTTTGGCTTCGAGACACAGGTACTTTGGCTGTATGGCAACAACATAACGTGGGTTGAGGCCGGGGCCTTCAGTAACCTCAGGGTGCTGGAGGAGTTGGATCTGGGCGATAACCCGTTACAGCGCCTGGAAGGTGGAGCCTTCAGGGGCTTGGAGAGGCTGCAGAGCCTGCACATGCATCGTTGCAAGCTGGCCACTCTCCCCCATGACCTCTTCCACAAGCTGTACAGCCTGCAGTTCCTCTACCTGCAGGAGAATCAGCTCCACTTTTTGCAGGATGACCTGTTCTCAGACCTGGTCAACCTCACCCATCTCTTCCTGCATGGAAACCGCATCCGTGCCCTGTCTGAGAATGTGTTCAGAGGCCTGGTCAACCTGGACCGCCTCCTTCTCCATGACAACCGCGTCAGGCAGGTCAACCGTCGGGCTTTCCGTGACCTGGGCCGCCTGACCATCCTTTACCTGTTCAACAACTCCCTGGCCGAGCTGCCAGGCCAGGCCATGAAAGACACCCAAGGCATCCAGTTCCTCCGCCTCAATGGTAACCCCTGGTCGTGCGGCTGTGAGGCTCGTCCCCTCTGGGAGTGGTTCCGCAAGGCCcgcatctcctcctctgagctCATGTGCACCTCCCCATCCCAACGTCGCGGCCAAGACCTCAGATTCCTCCGGGAGATGGACTTCGCCCTCTGCCCTCTGCCTGACCCTGGCTCTCTGGCGGGATCCACCACGACCACCTTCAGCACTAAGACCCGCTGGTGGTTCTCCAAGCACAAGCCTGTATCTTCATCCAAGGCCTCGTACCAGAAGAGCACAGAGGCGGTGAAGGCCTTCCCCTTCCCTGCCGGAAAGCCTCAGTACCTCCCCAAGAACCCCTCCGAGACCTTCTCCTCAAAGTATGAACTGTCGGAGGATGAAGTAGCGCTCCCCAAGCTAGACCAAGAAGAATATTGGACCAACTACGGCAATGAAGACGCCTCCATCCGCTGCCTAGAGCTGGAGTGCCCCCCAGGCTATGACACAGCCTTCCCCTCGTCCTCCGCCTTACGCAGCACCCCatccctcctccacctcctctccctctccataGTCACATTATCCCTCCATTTCCTTTTTGGCTGAACTCTGCTCTCCTTCACTCCCCTTTCCCCTCTGATTTCTCTTTCCAACCCTAACAAATACCTGGATCTTGATTCCTTTCAGTTACCTCCTCGACTTGCAGGAGGTGCTACACTGACACAGGAGACAGGTGAGGCAGCAGGGAGCTGTTTTAAAGAGCAGAGAACAGTTGAGTTGATGTAGAGCAGGACAAGAATTCAATGCTGAAGTAGCTGCTGCTTATAGTACAGGCATTAAAATCAGGGATCAGATCATGGAAACTGACTCTGATAGTGACGGTACAAAGGCAGAAATCTACGGCAACATGATGAAATGATAGAGACAATATACAGCTCAGCTGTTGGTGTCTCCTGGTGGTTTTTGATAACACAGCTATAAACAACGCAGGCGTTGTGACTCGTCAACAGCTATTTTCTATAGTGCTCACCATCATCCACTCACAGCTAACATATTGTTCCTCacttatttatttcattcatcaTGAATGAAAGTGGGGATTGATTATACCAGAAGTATGAGAAAGAGGTGGATTACCACAGATAATGAGTCTTGAGAGGAAAGAATTACAGTgagaagtaaaaagaaaatcaatacaATGTGAGCAGAGTGGGCTATAGATGTTCATCTAAAGGCAGAAAAGAATGAGAGGATCAGAACTGCAGCCAAGAGCAGCTCTACTCTCTCCTTCAGATTCAAATCTTGTGTGATCCCAGCGATGCCAGCAAACAACCATCACCACCCACACTTGTACATACCACTAATCAacactgtacatacacacatccTAAACTGCTTTGTATTTTAGATTAGCTGGATTTTTTATTTGGTACCATTTAGTAAACTACAGTTTGTGGCGATAGATACTTAGATTGTAAATGGAAGGCAAACAAATGAAATGTGAAAACTCTATTTTTGCCCCCCCATGTTTTTAAGTgttgtctcctcctctctctgaaaAGGGAAGGCTTGTGCTTGagattctgatgttgttttttttttggtgtgtgattcagtttgtgtgtgtgtgagtgggatTGGACTGCTATAGACTAATAACCAAAGTCTTGAGAAGAAAAGAATTACTTTTACAGTCTAAGTAAGACAACCAGTTTGATTATGTCTCTTCCTAAAATGAGtgcctctgtgtatgtgtctatttttcctttaaaaacatggcctttgtctctctgtctgtctttctctctgtctgtttgtctggaTGTTCAAACTGACACAGAACAAGGTAAAAACAACACCAGGGCTAAATCCTACACAGCTCTTTGTGTTATTTGAAGCCTCAGGTCTCTATCCTGCTGGCTCCTGTTAAACTTTGACCTGCAATTGGTCTCTGTCAGTGTGACTAGGTACGTATATATATGAGGatgtgtgtatttctttttagcTCGGATTGAAAGTTTAAAAAGTCCTTTATTCACTGATAACCTTACTAGGACCCATAACTGTTGAAAAACTATAGTCTCAGAAATGCATGGGAATGTGgtttttactattttctgaaCAATGGGTAAATCCAAGGATTTATGTGATTTCAGTGATATCTGTATTGGATGGTACTACAGACCATAAACAGACCACGAGGACAATCAAGCTCTAATATATGAAATCATCTTTCCCATATTAAAGCTGTACTTTATAAGAGAACCTTTCTGACTCAACTGTGTGATTTGGATAATGGGATGGGTAGTGATTGAGCAATCTGTTAAACACGATGCCAATCCAACCTATTGTGATCCGCATTATTCATGGGGGTCGTAAGTTCCTTGTCAACCCCAAATGTTAGTAAGTCCATACCGTGACTGTGAGTTCCTGCGTAGAACATGAAGGATACTGTGATGCTGTTAGATTCTGTATTTTTCAATAGATAAACTTGTTAGGAAAGTGTTTTGgttcattaaaaaataaagaaacaaacaaaca

Function

NR:

description
PREDICTED: reticulon-4 receptor-like 2

GO: NA

KEGG:

id description
K16661 RTN4RL2, NGR2; reticulon-4 receptor-like 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812706.1 True 3413 mRNA 0.48 4 21264992 21271131

Neighbor

gene id symbol gene type direction distance location
slc43a3b slc43a3 coding upstream 5946 21242454 ~ 21259046 (+)
LOC120566636 LOC104961169,LOC103354768,LOC101069382 coding upstream 82442 21179991 ~ 21182550 (+)
cabp2b cabp2,LOC103354773,LOC101063225,LOC104961167,LOC100691085,LOC101481420,LOC107101015,LOC105932663,LOC106516609,LOC102297131 coding upstream 91221 21158895 ~ 21173771 (+)
LOC120566628 LOC104961166,LOC103390920,LOC102076832,LOC103354772 coding upstream 110164 21146681 ~ 21154828 (+)
si:dkeyp-121d2.7 LOC103354771 coding upstream 128545 21132215 ~ 21136447 (+)
clp1 clp1,LOC102795812 coding downstream 12887 21284018 ~ 21287806 (+)
si:dkey-6i22.5 NA coding downstream 36961 21308092 ~ 21310959 (+)
med19a med19 coding downstream 39906 21311037 ~ 21314140 (+)
ssrp1a ssrp1 coding downstream 111596 21382727 ~ 21401180 (+)
p2rx3a p2rx3 coding downstream 135754 21406885 ~ 21415624 (+)
G106712 LOC103354767 non-coding upstream 59616 21204689 ~ 21205376 (+)
G106709 ctnnd1 non-coding upstream 62822 21196804 ~ 21202170 (+)
G106708 NA non-coding upstream 68338 21196179 ~ 21196654 (+)
G106707 NA non-coding upstream 70143 21193066 ~ 21194849 (+)
G106684 NA non-coding upstream 156633 21107498 ~ 21108359 (+)
G106851 NA non-coding downstream 175751 21446882 ~ 21447096 (+)
G106972 NA non-coding downstream 489867 21760998 ~ 21761444 (+)
G106975 NA non-coding downstream 492236 21763367 ~ 21763641 (+)
G106992 NA non-coding downstream 572531 21843662 ~ 21843950 (+)
G107025 LOC104954424,LOC103390732 non-coding downstream 1059881 22331012 ~ 22378340 (+)
hrh2a LOC103354784,LOC104948895 other upstream 317577 20934729 ~ 20947415 (+)
G106465 LOC104955902 other upstream 912825 20351721 ~ 20352167 (+)
LOC120566323 LOC102781894,LOC101481808 other upstream 1203654 20028863 ~ 20061338 (+)
G106237 spock1 other upstream 1612518 19604840 ~ 19652474 (+)
adra2db LOC102798575,LOC100708556,LOC101479598,LOC102300678 other upstream 2295046 18963934 ~ 18969946 (+)
selenoh selenoh other downstream 8556 21279687 ~ 21283229 (+)
zdhhc5b zdhhc5 other downstream 18400 21289531 ~ 21350978 (+)
stx3a stx3,stx2,LOC103390944,LOC106516362,LOC103147491,LOC107376692 other downstream 177669 21448800 ~ 21468827 (+)
G107163 LOC103356264 other downstream 1591059 22862190 ~ 22865676 (+)
ubxn1 ubxn1,LOC103374193 other downstream 1632624 22903755 ~ 22909562 (+)

Expression


Co-expression Network