nsdhl (nsdhl)


Basic Information

Item Value
gene id nsdhl
gene name nsdhl
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 16989817 ~ 16995549 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812717.1
ACCTTTGTGCTGAGCATTACCTCGACCAATCACACAGCACTTCTCACTCAGCAGATTCAGACAGTTCGGTTAGTTGCACGCGCTGACTGCAGTGCCTGATACTCTCGCTTACCTGTTGGTTACTTTTTACTCATTATGGCCACGCGCGTTCGACCGAGTAATAAACGGTGTGCAGTCATCGGGGGGTCTGGTTTTCTGGGCAGACACTTGGTGGAGAAGCTGTTGGATCGAGGCtactctgtttctgtgtttgacATCCGTCAGAGCTACGAGCTGTCTGGTGTCACCTTCCACCAGGGAGACCTCTGCGACAAACAGGCTCTGCTGCCAGCTATGAAGGATGTGTCCCTGGTCTTCCACTGTGCCTCCCCGGCCCCTGCCAGCGATGACCGCGGGCTATTTGAGAGGGTCAACATTCAGGGCACACGCACCGTCATTCAGGCTTGCATCGAGGCTGGAGTACAGAAACTGGTCCTGACAAGCAGTGCCAGTGTGGTGTTTGAAGGCACAGACATTAAGAATGGGAGAGAGGATCTACCATACGCCAAGAAGCCCATCGACTATTACACAGAGACCAAGATTGAGCAAGAAAAGctggTCCTCGAGGCCTGTGACAAGGAGAAGGGTTTCCTCACAGTTGCCATCCGGCCTCATGGCATCTTTGGCCCTCGGGACCCACAGCTGGTTCCTATCCTAGTGGACACTGCTCGCAGGGGCAAGATGAAGTTCATCATTGGTGATGGGACAAATCTGGTGGATTTCACCTTCGTGGAGAATGTAGTTTATGGCCACATCCTGGCTGCTGAACGCCTGAGGTCGGACTCCCCCATATGTGGAAAACCGTACCACATCACCAATGATGAGCCAGTTAGATTCTGGGACTTCATGTCTGAGGTGTTGGTGGGTCTGGGATATGCTGCTCCCCGCTACCACCTGCCCTACACTCTTGTGTACGGACTGGCCCTGCTCCTCTGGCTGCTGGCCCTGATCCTGCGTCCTCTAGTGTCCTTTAAACCCACCTTTACACCAATGAGAGTGGCTCTGGCTGGAACCCACCACTACTACAGCTGTGACCGCGCCAAGCAGGACCTGGGCTACAAACCCGTAGTCAGTCTGAAGGATGGGATAGCGCGCACAGTGCAGAGCTACCCTCACCTCAGACAAGGGGCTTGATGGTAGAATGGAGGTAAAGGCTGCTGAGAGACATGTATAAGGACGTACAGTTGCACTCACTGAAAATAAGGTGATTAGATCACCCTGAATGGACAATTCAAAATGAGGGAACAGACTTTATCTTTATTCAAACCTCACGATGTGTACCATTTTGTGTGCCTTTTCAACGGTTATGTACCATTTTTACCAGCAGATGGTAGCAAATGATTGTGGTTTTGGTCAACACACTGCAGTCTGGTCTTTCCAAAGTTATAAAGCACTTAGTAAACAGTAAACCACTTATGGCAACTATATAATATACTAAATATACTGATCTTACACTGTGAAAACTGCAAAGACTTGTTCCATGTTCACCCGTGTGCTGTACAACTGTTGAGATACTGCTGTTAAATGCCTTAATGTATTCCACTAAACCATTGTTCTCCTGATACAACTTGCATGAaaattattgtttaaaataatgactggcattacattacatggcCAAACGTATGTGGACAGGGATGTGTATTTTTGGGCTGGGGCagttttattcagtttgggataGGCTCTTTGGAAAGCAGCATACATAGATACTTTAGATAATATTGGGCCTTTCTTGTTTCAACAGAACCAAACCCCTGTGCTCAATGCCACTGTGTGGAAATGTGGAAAGCCTTCCTAGAAGAATGGAGGTGGCAATGTATAAGCAGCATATTACTTTCTATAGTTCAGAGCATATGTTCACCTTTTTTCAAGTCTGTCCTAAGACAATACATACCCATATGCACAATGAAACATTTTTTGGTTCCAGTGATTGTTTTTCCTGTCCATACTGGCCATGAAAGCGTCCCCTCCTAATGCGATTCCAATGCAAGAATTGGGGGATAAAAATCCACAGTCTTCGTTTGAAATGCATTTCAAAGTTCAGCAAAGGACAATATGAGGCTTTAGCAGACTGAGATAGACAAATCAGTGGATCAGACCTAATGTGGATTTTGCACTAAACACACTGAAACTTTAAAGGTTCCTGATTGATATAACAAAATCTGACTGTTAAGGTCTCATAATAGCTTAGGCTGGATGTAATGGATTTTACACAGAACAAGGGCTAGCTCTTAGTATTGGAATTGCATTAGGAAGGGATCGCTTCATGGCAAATAGGGACAGGAGGAATGATCATTTCAATGTATATATGGGACTAATGTGTCTCCACATTCTTTTGGCTAATTAGTGTAgttccacatactgtatacgTGATTCACAAACATTGTTCCGAACACATTGTACCTTCTCTCTGATACTGGAGTATCTCTGGTATGTGTTTCTACAAGTTACGcaaactgttaaaataatatTCAACAACGTCAAATACAGTAATGGGATGGGCAATGAAAATGCATCAGAAGCTATTGTAATCCATGTGTAGTTCTGTCATTTTAATGATGACAAAGTTATATAACTGGGGAACTTGTAAACACAAGAGGGCCTTATTTTCTCAGTATTTGTGTCCAATGTATTAATTAGCTGCTACAAAGATTTTGCCTTTTCTAGGTGAA

Function

symbol description
nsdhl Predicted to enable oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Acts upstream of or within response to yeast. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Human ortholog(s) of this gene implicated in CHILD syndrome and CK syndrome. Orthologous to human NSDHL (NAD(P) dependent steroid dehydrogenase-like).

NR:

description
sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating-like

GO:

id name namespace
GO:0006694 steroid biosynthetic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity molecular_function

KEGG:

id description
K07748 NSDHL, ERG26; sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812717.1 True 2711 mRNA 0.45 8 16989817 16995549

Neighbor

gene id symbol gene type direction distance location
znf185 NA coding downstream 818 16971172 ~ 16988999 (-)
si:dkey-27i16.2 LOC103370713,LOC104948504,LOC103391155,LOC108242049,LOC101171753 coding downstream 47581 16938340 ~ 16942236 (-)
eda NA coding downstream 439844 16537733 ~ 16549973 (-)
LOC120567144 LOC104923178 coding downstream 452370 16533282 ~ 16537447 (-)
LOC120567142 LOC104959287 coding downstream 456637 16530270 ~ 16533180 (-)
gcna NA coding upstream 5861 17001410 ~ 17007394 (-)
ogt.1 ogt coding upstream 12579 17008128 ~ 17024727 (-)
kctd12b LOC107396469,LOC101170105,LOC102309695,LOC106928388 coding upstream 102983 17098532 ~ 17113581 (-)
znf711 znf711,zfx coding upstream 122916 17118465 ~ 17125904 (-)
zgc:66447 LOC103370289,LOC101476930 coding upstream 130796 17126345 ~ 17138211 (-)
G105443 NA non-coding downstream 234259 16755336 ~ 16755558 (-)
G105436 NA non-coding downstream 300512 16689083 ~ 16689305 (-)
G105435 NA non-coding downstream 301227 16688056 ~ 16688590 (-)
G105433 NA non-coding downstream 302088 16687479 ~ 16687729 (-)
LOC120567052 NA non-coding downstream 492495 16496457 ~ 16497322 (-)
G105549 NA non-coding upstream 56956 17052505 ~ 17055622 (-)
G105577 NA non-coding upstream 122202 17117751 ~ 17118264 (-)
G105578 NA non-coding upstream 156622 17152171 ~ 17153593 (-)
G105598 NA non-coding upstream 328911 17324460 ~ 17324955 (-)
G105597 LOC104923197,LOC104943958 non-coding upstream 338855 17334404 ~ 17335952 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other downstream 26281 16957643 ~ 16963536 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other downstream 314962 16524356 ~ 16674855 (-)
unc5a unc5a,LOC102788949 other downstream 886023 15960197 ~ 16103794 (-)
hnrnph1 hnrnph1,LOC102791917 other downstream 1117868 15866060 ~ 15871949 (-)
tspan17 tspan17,LOC103361971 other downstream 1370709 15598343 ~ 15619108 (-)
tmsb1 NA other upstream 146533 17142082 ~ 17151616 (-)
frmpd3 frmpd3 other upstream 171347 17166896 ~ 17256932 (-)
nexmifb kiaa2022 other upstream 526592 17522141 ~ 17577811 (-)
kif3a kif3a other upstream 672535 17668084 ~ 17748547 (-)
LOC120567448 LOC103359144,LOC108240510,LOC107375047,LOC100701092,LOC102792911,LOC102297680,LOC101469512 other upstream 788011 17783560 ~ 17795391 (-)

Expression


Co-expression Network