LOC120566359 (LOC106925651,LOC106940816,LOC108240559)


Basic Information

Item Value
gene id LOC120566359
gene name LOC106925651,LOC106940816,LOC108240559
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 17494973 ~ 17498736 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812741.1
TTGGTGGTATATGCCAACTGGTGGCTGGACTGATTTCCTTTAGAAGATACGATCATCTGAGTGGCACTGCGTTCATTGGCTATGCTGCTCTTTGGGGCAGTTATGGTGCCACCCGAATCTACTTCGGTGCCTTAGCTGAAACTCCTGCAACAGCATCTATGCCACATCAGATGATGAACAATTTGTCCCTGTCCACTAACATGATGAGCAACATGTCTCTGAATGCCACCACAGAGATTCCAGTTAGCCATCTTTTGCTGTCCATAAAAGAGTCAGCAATCGCTGGTCTGGTCCCTTATATCCTTCTGTCCTTTCTCCTAGCCTTCTGCTCTGCCACAGTCAATTACATCATGCCTTTTGTTTTTGGGGCCATCACAGCCACCTTAGTTTTTGAAGCAGTGGGTCTGGTAGCGAGCTCCTGGGCTCTCGTGGTCTCTGGGGTTCTGGAGTTGCTCATTCTGATTTTTGCCATCTATGGTTCAGCTGCACTGCTCGTAAAAGGTCTGACTCAACGTCTAGTCCTCAAAGGCTTCGGTACCCCCCTTTTTAATGTTCTTCTGCTAGGGACCCCCAACTCAGCAAGCGCCCAGAGTATTGgccaggagaagaagaaaaacacaaaatatgcaGAGCCCATGGCCTTGGGTTTCTTCTGTGACACTGTTGCGTCCTTCATCTTTGCTTTCTACAGCTTTGGGTACACGAAGTCCTTTGGCTTAGGAGCAGCATGGGTCTCAATTATAACAGTTGCCCAGCTGTTCTCCAGCTACTACGCCCATCTGCGCCAAGACTGCTACCACACCACTAAGTTTGGTCTCCATGCCACATATTGGCTGATCAAAGCTTGGGATGAATTTGTGGTATCTGCTCTGGTTGGGGTGGACATTAATGTGGCCTCAGGTAGGGTAACAATGGTGGGAAATTGGTTCTTTGTGATGGCAGGCGTGGTGCTCTGTGTGGGAAGCCTGAACACAGATGTCCTAGAGCTGATCCACAACATGTTGTTTCTCCTGCTTACGCTCTCAACAATCCCCCAGATTCCTCTCCAGGGATACTACATCTTCTTTGGTGTGGCCTGCTGCCTGTTCACCGCAGCCTCCCTGTATGGCACTTTCTCGCGTCTCATCAACACCATAGCAGAGAAGTCTCTAATCCCTGTAGGACCACAGCCCATCTCCTCTGACCAGTTGAAGAAGGCTTTGAAGTGCTGCAGGGCCGAGCAGGGGGACCCAGAGCCCCTACCCCAAACTGACCAGGGTTCAGACACCCTGTTCTACCTTTCAAATGGGGTTGCAGCTCTCTCAGCTCTTCATGCAAGTTCATCCAGAACGAATCCTACCTTTCTTCATCTGACTATCCCTTGGGTCCTCATCTCTGGAGCCATCATCCAGGTCTATGTCAGCCGACTGCAAATCACTGAAGGTggccgttttggttcagtcaTCTCATCCATCTATGTAGCAGTATGGGCAACCTGGACCTGGTTTAGGTTTGCAGgtGACATGCTTCAGCTTTCCACAGAGGAAAGTTATGGTTTTACAGCCGGAGCCATTGCTCTCTTGGTCATTAATGCTTTCCTTATGCTGATTGCTGCCAACAGGAACCTGGTTTTGCTGTTTCTAACAGCAGTCATGGAGGTTGTTCTGGTGTGTTTCCTGCTTTCCACTCTGCAGCGACTGCCTTATGAGCTAGAAATTGCCATGCTTGCACTACTTTCAATAATTTGTATATATGGAGCTCTGGCATCACTGGTGAACTGTATCTTCTCACAAAGACTGCTACCTATGGGCCCTCCCTTAAGAAAGGAGAAAGTGAAGCAGGAATCTGCTCCGGAGCTTCCCTGTCCCGTGGCTAATTCCCGACTCACCAGTGGTCTCCTGAAGATCGCTGGCCTCCTGAAAGAAGGAGGAGTGTGTGGTATTCCCACAGACACTGTGTATGCCCTGGCTGCCTCCTGCAAGAATCCTCAAGCTATAGAGAACAtctataatattaaaGACAGACCAGCAGAGAAGCCCATCTGCATTTGCATCTCTAACGTGGAGCAGCTGGTGGCAGCCAAGCCTCCCTTCAGCCCTCTGCTCTGGGAGTTTATGAGGAATGTGTATCCAGGCGGCATCAGCTGCATCGTCAGCAAAGGAGACTGGCTGTTCACACTAGGAGTGGGGCCAGCTTATGACCGTGTTGGCACCAAGGATAGCATCATGATCCGCGTCCCTAACCACACGGTGACGGGCCACCTATGTGACATCACCGGACCCCTTGCTATCACGTCAGCCAATCCCAGCGGAGAGCCAGACAGCACCCACCACACCATGGTCATCAATCGACTGGGACACAAGATCCAAGGGGTTCTGTGTGACGGAGACTCAAATGAAGTTGTTGCTTCCACCGTGGTTAACTGCCTGAAGATTGATGAAGGGACCATCACCATTGTAAGGGAAGGATGTGTCCCTGCAGTAAAAGTCCGACAGATCTTCGACAGAGTGAAAAACGCTATGGTGTGATTGTCTCGTACCTCATTTCTCTGCCTCAGAGAGCCTCATCATGACTTGTTCCCTACAAGATCGTCTTCTTCAGCTCCCCCCATTTCCATTTAACAAGAAACACTATATGAATGATATGTgaaagacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtattgcTGGTTGTCTAACCTATGTGTATAACTGTGGATGTCTTGGCAAatgttacaataaaaaaaaaacatttgtagcTCACAATGTCCTTGATGGACACTTAACATTCTCAGCAAAAACTGTTTCAACTGATGTACAACAACTTTATGAAGATACCATTTCTCAGCTTTATCATtctggcaaaaaaacaaaagtgtaatAACTTGTATATTTAGGTTAGTTAAAAGATTATCAAAATATCTTTATTAACTGTTTATTAAGAATGTTTAATATTTCTGTAAATATGTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106925651

GO: NA

KEGG:

id description
K07566 tsaC, rimN, SUA5; L-threonylcarbamoyladenylate synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812741.1 True 2958 mRNA 0.48 9 17494973 17498736

Neighbor

gene id symbol gene type direction distance location
LOC120567262 LOC103359155,LOC104923198,LOC101474624,LOC106518113 coding downstream 12855 17480296 ~ 17482118 (-)
LOC120567260 LOC103359160,LOC108240568,LOC106514372,LOC101486456 coding downstream 36722 17451649 ~ 17458251 (-)
LOC120567258 LOC103359155,LOC104923198,LOC101474624 coding downstream 49913 17443222 ~ 17445060 (-)
LOC120566521 LOC103359160,LOC108240568 coding downstream 137673 17351254 ~ 17357300 (-)
LOC120566998 LOC103359155,LOC104923198,LOC101474624,LOC106953605 coding downstream 151014 17342141 ~ 17343959 (-)
glod5 glod5 coding upstream 8387 17507123 ~ 17510542 (-)
rlim rlim,LOC104950806 coding upstream 12213 17510949 ~ 17519476 (-)
abcb7 abcb7,LOC102795903 coding upstream 88940 17587676 ~ 17618547 (-)
zdhhc15b zdhhc15 coding upstream 126821 17625557 ~ 17629897 (-)
atrx atrx coding upstream 180964 17679700 ~ 17723014 (-)
G105597 LOC104923197,LOC104943958 non-coding downstream 159021 17334404 ~ 17335952 (-)
G105598 NA non-coding downstream 170018 17324460 ~ 17324955 (-)
G105578 NA non-coding downstream 341380 17152171 ~ 17153593 (-)
G105577 NA non-coding downstream 376709 17117751 ~ 17118264 (-)
G105549 NA non-coding downstream 439351 17052505 ~ 17055622 (-)
G105749 NA non-coding upstream 256478 17755214 ~ 17755915 (-)
G105759 NA non-coding upstream 329886 17828622 ~ 17831148 (-)
G105768 NA non-coding upstream 376100 17874836 ~ 17876295 (-)
G105769 sept8 non-coding upstream 378296 17877032 ~ 17881994 (-)
G105784 gabrb2,LOC102788768 non-coding upstream 430096 17928832 ~ 17933470 (-)
frmpd3 frmpd3 other downstream 238041 17166896 ~ 17256932 (-)
tmsb1 NA other downstream 343357 17142082 ~ 17151616 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other downstream 531437 16957643 ~ 16963536 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other downstream 820118 16524356 ~ 16674855 (-)
unc5a unc5a,LOC102788949 other downstream 1391179 15960197 ~ 16103794 (-)
nexmifb kiaa2022 other upstream 23405 17522141 ~ 17577811 (-)
kif3a kif3a other upstream 169348 17668084 ~ 17748547 (-)
LOC120567448 LOC103359144,LOC108240510,LOC107375047,LOC100701092,LOC102792911,LOC102297680,LOC101469512 other upstream 284824 17783560 ~ 17795391 (-)
LOC120566288 NA other upstream 358348 17857084 ~ 17859755 (-)
sfxn1 sfxn1,LOC103359221,LOC100705454,LOC106517750,LOC103471194 other upstream 488460 17987196 ~ 17995350 (-)

Expression


Co-expression Network